iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006646

Ensembl Protein ID

AT1G15470.1

UniProt Accession

Q9XI22; Q9XI22_ARATH

Genbank Protein ID

AAD39675.1; AAM61168.1; AAN41335.1; AEE29327.1

Protein Name

F9L1.42 protein; Putative uncharacterized protein At1g15470; Similar to unr-interacting protein and contains WD40 domains; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

AC007591; AY084604; BT000935; CP002684

Gene Name

At1g15470; F9L1.42; F9L1_42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G15470	AT1G15470.1	AT1G15470.1
AT1G15470	AT1G15470.2	AT1G15470.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-24	83.6	141	177
UBD/Beta-Prp	8.50e-42	144.2	10	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           +s++ +++  sd t+l+s++d g i++WD+r+++ ++
   Q: 141  GSIRTVEWlhSDnTILSSCTDTGDIRLWDIRSDKIVH 177
           689*******88799999999999********99887 PP

UBD/Beta-Prp

   S: 9    hksvitcvkf...spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           h+ ++ +v++   +pd+ +l+++s+d+   + + +tg+ + +++gh+++v+++++++++   +++s D t+k+w+  tg+ +h+++ h++ v++++fs
   Q: 10   HSRPVVDVAYspvTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFS 106
           44455556666667888889999999998999999999999999999999999999998888888999999999999999999998.99999999999 PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
           +++++l++G+  +++r++dl+      +   +  g++++v++  ++  +l s+++ + +rlWd++++k+++tl+   +++v+s +++++g+++ + ++
   Q: 107  EDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDnTILSSCTDTGDIRLWDIRSDKIVHTLET--KSPVTSAEVSQDGRYITT-AD 201
           999999999999999999988877777766777777777777555526666666668899999999999999964..889999999998866655.56 PP
   S: 201  dgtvklwdlqt 211
            ++vk+wd ++
   Q: 202  GSSVKFWDAKN 212
           78899998775 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW 60
SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV RACAFSEDTH RLLTGGMEKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTACCATCG TCGTCTCCGC GAGTTCTTCT CTGCGTTTAA GCCATAGATA ACAAACCAAA 60
CTAAAAAAAA AAAGTTTCTC CTTTTATCAT TCCTTCTCTT CCCTTGTATA GGTGTGATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002091	Ailuropoda melanoleuca	47.73	1.00e-74	272.00
IUUC-Apl-003327	Anas platyrhynchos	46.72	1.00e-62	232.00
IUUC-Aca-005324	Anolis carolinensis	48.44	4.00e-76	277.00
IUUC-Aly-006452	Arabidopsis lyrata	98.80	0.00e+00	676.00
IUUC-Afl-008701	Aspergillus flavus	39.93	4.00e-45	174.00
IUUC-Ang-009593	Aspergillus niger	40.20	1.00e-43	170.00
IUUC-Aor-010206	Aspergillus oryzae	40.99	9.00e-57	213.00
IUUC-Ate-010461	Aspergillus terreus	36.74	7.00e-28	117.00
IUUC-Bgr-012308	Blumeria graminis	39.02	2.00e-63	234.00
IUUC-Bta-013429	Bos taurus	50.00	1.00e-77	282.00
IUUC-Bci-013803	Botrytis cinerea	36.09	5.00e-55	207.00
IUUC-Bol-016595	Brassica oleracea	94.33	0.00e+00	648.00
IUUC-Bra-017775	Brassica rapa	94.80	0.00e+00	653.00
IUUC-Cja-018740	Callithrix jacchus	47.56	3.00e-74	271.00
IUUC-Cfa-021145	Canis familiaris	50.00	9.00e-78	283.00
IUUC-Cpo-022373	Cavia porcellus	50.00	5.00e-79	286.00
IUUC-Cre-022806	Chlamydomonas reinhardtii	52.41	6.00e-86	310.00
IUUC-Csa-023098	Chlorocebus sabaeus	50.00	2.00e-77	281.00
IUUC-Cho-024856	Choloepus hoffmanni	44.90	2.00e-61	228.00
IUUC-Cin-025541	Ciona intestinalis	50.17	6.00e-83	300.00
IUUC-Csv-026287	Ciona savignyi	49.65	1.00e-82	298.00
IUUC-Cgl-026513	Colletotrichum gloeosporioides	38.51	1.00e-54	206.00
IUUC-Cne-026869	Cryptococcus neoformans	45.00	4.00e-68	251.00
IUUC-Dno-029213	Dasypus novemcinctus	50.68	9.00e-79	286.00
IUUC-Dse-031350	Dothistroma septosporum	38.65	4.00e-57	214.00
IUUC-Dme-031857	Drosophila melanogaster	49.66	1.00e-78	285.00
IUUC-Ete-032558	Echinops telfairi	41.57	2.00e-48	185.00
IUUC-Eca-033934	Equus caballus	50.00	9.00e-78	282.00
IUUC-Eeu-034650	Erinaceus europaeus	39.46	3.00e-60	224.00
IUUC-Fca-035909	Felis catus	50.00	2.00e-76	278.00
IUUC-Fal-036706	Ficedula albicollis	45.59	6.00e-63	233.00
IUUC-Fox-037780	Fusarium oxysporum	39.45	3.00e-56	211.00
IUUC-Fso-038197	Fusarium solani	40.31	8.00e-52	196.00
IUUC-Gmo-039707	Gadus morhua	48.10	1.00e-74	272.00
IUUC-Ggr-040054	Gaeumannomyces graminis	36.45	8.00e-53	200.00
IUUC-Gga-040901	Gallus gallus	49.48	5.00e-77	280.00
IUUC-Gac-041876	Gasterosteus aculeatus	48.79	2.00e-74	271.00
IUUC-Ggo-044583	Gorilla gorilla	49.15	8.00e-73	266.00
IUUC-Hsa-046553	Homo sapiens	47.88	1.00e-74	272.00
IUUC-Itr-047980	Ictidomys tridecemlineatus	50.00	9.00e-78	282.00
IUUC-Loc-052598	Lepisosteus oculatus	50.52	5.00e-79	286.00
IUUC-Lma-053226	Leptosphaeria maculans	43.89	3.00e-57	214.00
IUUC-Laf-054053	Loxodonta africana	50.00	5.00e-78	283.00
IUUC-Mcc-054652	Macaca mulatta	47.73	1.00e-74	272.00
IUUC-Mor-057256	Magnaporthe oryzae	35.80	1.00e-51	196.00
IUUC-Mpo-057303	Magnaporthe poae	35.83	2.00e-53	201.00
IUUC-Mla-059073	Melampsora laricipopulina	42.26	3.00e-63	234.00
IUUC-Mga-059664	Meleagris gallopavo	49.31	1.00e-75	276.00
IUUC-Mvi-060534	Microbotryum violaceum	35.43	7.00e-37	147.00
IUUC-Mmr-061044	Microcebus murinus	50.00	1.00e-77	282.00
IUUC-Mdo-063019	Monodelphis domestica	49.32	4.00e-76	277.00
IUUC-Mmu-064092	Mus musculus	50.00	1.00e-77	282.00
IUUC-Mpu-066557	Mustela putorius furo	50.00	9.00e-78	282.00
IUUC-Mlu-068179	Myotis lucifugus	50.00	3.00e-78	284.00
IUUC-Nle-069482	Nomascus leucogenys	47.56	5.00e-74	270.00
IUUC-Ont-072663	Oreochromis niloticus	48.34	1.00e-70	259.00
IUUC-Ocu-074942	Oryctolagus cuniculus	50.00	9.00e-78	282.00
IUUC-Ola-086704	Oryzias latipes	50.52	2.00e-78	285.00
IUUC-Olu-087796	Ostreococcus lucimarinus	59.17	3.00e-103	367.00
IUUC-Oga-088932	Otolemur garnettii	43.80	1.00e-52	199.00
IUUC-Oar-090398	Ovis aries	50.00	9.00e-78	282.00
IUUC-Ptr-091202	Pan troglodytes	50.00	1.00e-77	282.00
IUUC-Pan-091948	Papio anubis	50.00	1.00e-77	282.00
IUUC-Psi-093863	Pelodiscus sinensis	46.42	5.00e-64	236.00
IUUC-Pma-094255	Petromyzon marinus	47.75	2.00e-73	268.00
IUUC-Pno-095075	Phaeosphaeria nodorum	45.36	1.00e-59	222.00
IUUC-Pfo-096438	Poecilia formosa	50.87	3.00e-80	291.00
IUUC-Pab-097994	Pongo abelii	50.00	1.00e-77	282.00
IUUC-Pca-100761	Procavia capensis	45.92	2.00e-67	248.00
IUUC-Pva-102794	Pteropus vampyrus	46.26	8.00e-68	249.00
IUUC-Pte-104245	Pyrenophora teres	44.52	3.00e-60	224.00
IUUC-Pyt-104537	Pyrenophora triticirepentis	44.52	3.00e-60	224.00
IUUC-Rno-105712	Rattus norvegicus	50.00	1.00e-77	282.00
IUUC-Sha-107568	Sarcophilus harrisii	49.32	5.00e-76	276.00
IUUC-Ssl-108655	Sclerotinia sclerotiorum	36.59	2.00e-54	205.00
IUUC-Sar-113491	Sorex araneus	41.58	5.00e-40	157.00
IUUC-Sre-115008	Sporisorium reilianum	42.05	3.00e-61	228.00
IUUC-Ssc-116392	Sus scrofa	47.56	7.00e-74	270.00
IUUC-Tgu-116835	Taeniopygia guttata	46.33	6.00e-62	230.00
IUUC-Tsy-119522	Tarsius syrichta	48.30	1.00e-69	256.00
IUUC-Tvi-122609	Trichoderma virens	39.13	1.00e-54	206.00
IUUC-Ttr-128202	Tursiops truncatus	50.00	3.00e-77	281.00
IUUC-Vda-129675	Verticillium dahliae	39.08	3.00e-53	201.00
IUUC-Vpa-130382	Vicugna pacos	50.00	9.00e-78	283.00
IUUC-Xtr-132648	Xenopus tropicalis	48.10	9.00e-71	259.00
IUUC-Xma-133969	Xiphophorus maculatus	47.10	2.00e-70	258.00
IUUC-Yli-134670	Yarrowia lipolytica	37.38	9.00e-51	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence