iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000001969.1	ENSORLT00000002452.1	ENSORLP00000002451.1
ENSORLG00000001969.1	ENSORLT00000002453.1	ENSORLP00000002452.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-22	76.9	618	656

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t++ WDlr+g++l+
   Q: 618  GHTDGASCIDIsHDgTKLWTGGLDNTVRSWDLREGRQLQ 656
           8**********9888*********************998 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MYPQGRHPMH LCFSSVQAPH QPGQPGFKFT VAESCDRIKD EFQFLQAQYH SLKVEYDKLA 60
NEKTEMQRHY VMYYEMSYGL NIEMHKQTEI AKRLNAILAQ IMPFLSQEHQ QQVAQAVERA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCCAC AAGGCCGGCA TCCGGTAAGT AGATGTCTGT GTCACTGTTT GTAAATGGAT 60
GCAAATACAG CACCTTTAGT TTAGAAAGCG CCTCATTAGC CCAGGATGGA GCTGCTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010724	Astyanax mexicanus	88.90	0.00e+00	1306.00
IUUC-Dre-028595	Danio rerio	90.55	0.00e+00	1284.00
IUUC-Gmo-039000	Gadus morhua	84.95	0.00e+00	1179.00
IUUC-Gac-041924	Gasterosteus aculeatus	93.49	0.00e+00	1295.00
IUUC-Ont-071865	Oreochromis niloticus	94.63	0.00e+00	1342.00
IUUC-Pfo-096880	Poecilia formosa	94.76	0.00e+00	1316.00
IUUC-Sha-106568	Sarcophilus harrisii	88.28	0.00e+00	1250.00
IUUC-Sar-113414	Sorex araneus	92.97	2.00e-180	625.00
IUUC-Tru-117982	Takifugu rubripes	91.14	0.00e+00	1340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence