iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053787

Ensembl Protein ID

ENSLAFP00000008471.3

UniProt Accession

G3T506; G3T506_LOXAF

Protein Name

Uncharacterized protein

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000010103.3	ENSLAFT00000010104.3	ENSLAFP00000008471.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-31	106.4	332	369
UBD/Beta-Prp	1.50e-46	159.3	281	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f++  t ++s+++D  +k+WD+ tg ++
   Q: 332  GHSKAVRDICFNTagTQFLSAAYDRYLKLWDTETGQCI 369
           8**********444699******************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletg.qcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++ ++  cl+ t+ gh+++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 281  KQIHVWSGHTKGVSAVRLFPlSGHLLLSCSMDCKIKLWEVYEDrRCLR-TFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC 368
           899*****************999****************976615666.**************************************** PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  d
   Q: 369  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWewD 450
           ****8..588889***999988889*******************************************************9444 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MSAAIAALAA SYGSGSGSES DSDSEGGRCS LPAADSLMHL TKSPSAKPSL TVAVDSAPEV 60
AVKEDLETGV HLDPAVKEVQ YNPTYETMFA PEFGPENPFR TQQMAAPRNM LSGYAEPAHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTG CGATTGCAGC TTTGGCTGCT TCCTATGGTT CGGGTTCAGG GTCCGAATCG 60
GACTCGGACA GTGAGGGTGG ACGGTGTTCG CTGCCAGCCG CCGATTCCCT CATGCACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	50.10	5.00e-144	504.00
IUUC-Aml-002243	Ailuropoda melanoleuca	97.87	0.00e+00	805.00
IUUC-Atr-002502	Amborella trichopoda	50.94	2.00e-152	532.00
IUUC-Apl-003885	Anas platyrhynchos	94.27	0.00e+00	1021.00
IUUC-Aca-004854	Anolis carolinensis	69.53	0.00e+00	743.00
IUUC-Aly-006158	Arabidopsis lyrata	48.86	6.00e-154	537.00
IUUC-Ath-007474	Arabidopsis thaliana	51.87	7.00e-154	537.00
IUUC-Ago-007726	Ashbya gossypii	37.08	2.00e-70	259.00
IUUC-Acl-008220	Aspergillus clavatus	43.04	2.00e-132	465.00
IUUC-Afl-008473	Aspergillus flavus	42.73	9.00e-130	457.00
IUUC-Afu-008773	Aspergillus fumigatus	42.96	7.00e-131	460.00
IUUC-Ani-009323	Aspergillus nidulans	43.62	3.00e-118	418.00
IUUC-Ang-009851	Aspergillus niger	43.84	2.00e-131	462.00
IUUC-Aor-009950	Aspergillus oryzae	42.73	9.00e-130	457.00
IUUC-Ate-010372	Aspergillus terreus	44.98	5.00e-133	468.00
IUUC-Ame-011660	Astyanax mexicanus	85.06	0.00e+00	973.00
IUUC-Bgr-012230	Blumeria graminis	44.27	1.00e-125	443.00
IUUC-Bta-012568	Bos taurus	98.38	0.00e+00	1085.00
IUUC-Bci-013646	Botrytis cinerea	44.38	2.00e-122	432.00
IUUC-Bdi-014199	Brachypodium distachyon	49.90	1.00e-145	509.00
IUUC-Bol-015695	Brassica oleracea	51.59	1.00e-160	559.00
IUUC-Bra-017923	Brassica rapa	50.36	6.00e-161	560.00
IUUC-Cel-018535	Caenorhabditis elegans	51.44	1.00e-177	615.00
IUUC-Cja-019071	Callithrix jacchus	98.01	0.00e+00	1082.00
IUUC-Cfa-020559	Canis familiaris	98.19	0.00e+00	1083.00
IUUC-Cpo-022356	Cavia porcellus	97.83	0.00e+00	1082.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	43.73	1.00e-76	279.00
IUUC-Csa-023125	Chlorocebus sabaeus	98.38	0.00e+00	1087.00
IUUC-Cho-024676	Choloepus hoffmanni	90.15	0.00e+00	945.00
IUUC-Cin-025229	Ciona intestinalis	70.55	0.00e+00	763.00
IUUC-Csv-025868	Ciona savignyi	70.53	2.00e-40	155.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	40.73	9.00e-108	383.00
IUUC-Cne-026885	Cryptococcus neoformans	51.47	2.00e-152	532.00
IUUC-Dre-027631	Danio rerio	84.67	0.00e+00	981.00
IUUC-Dno-029815	Dasypus novemcinctus	87.84	0.00e+00	996.00
IUUC-Dor-031143	Dipodomys ordii	83.03	0.00e+00	903.00
IUUC-Dse-031520	Dothistroma septosporum	46.09	1.00e-96	347.00
IUUC-Dme-032050	Drosophila melanogaster	61.96	0.00e+00	738.00
IUUC-Ete-032866	Echinops telfairi	96.57	0.00e+00	1061.00
IUUC-Eca-033384	Equus caballus	98.38	0.00e+00	1082.00
IUUC-Eeu-034471	Erinaceus europaeus	83.57	0.00e+00	845.00
IUUC-Fca-035727	Felis catus	98.38	0.00e+00	1088.00
IUUC-Fal-036774	Ficedula albicollis	94.66	0.00e+00	1027.00
IUUC-Fox-037951	Fusarium oxysporum	42.54	7.00e-127	447.00
IUUC-Fso-038287	Fusarium solani	43.17	2.00e-124	439.00
IUUC-Gmo-039670	Gadus morhua	81.79	0.00e+00	946.00
IUUC-Ggr-039764	Gaeumannomyces graminis	40.33	1.00e-116	413.00
IUUC-Gga-040293	Gallus gallus	94.99	0.00e+00	1027.00
IUUC-Gac-042159	Gasterosteus aculeatus	84.39	0.00e+00	976.00
IUUC-Gma-044299	Glycine max	63.64	4.00e-137	481.00
IUUC-Ggo-044864	Gorilla gorilla	98.01	0.00e+00	1083.00
IUUC-Hsa-046602	Homo sapiens	98.01	0.00e+00	1083.00
IUUC-Hvu-047431	Hordeum vulgare	28.52	1.00e-34	140.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	99.28	0.00e+00	818.00
IUUC-Kpa-049318	Komagataella pastoris	45.58	1.00e-96	347.00
IUUC-Lch-049796	Latimeria chalumnae	75.73	0.00e+00	844.00
IUUC-Lpe-051153	Leersia perrieri	51.15	3.00e-147	515.00
IUUC-Loc-052467	Lepisosteus oculatus	87.04	0.00e+00	992.00
IUUC-Lma-053107	Leptosphaeria maculans	48.40	4.00e-113	401.00
IUUC-Mcc-055706	Macaca mulatta	98.38	0.00e+00	1086.00
IUUC-Meu-056757	Macropus eugenii	80.92	0.00e+00	636.00
IUUC-Mor-057079	Magnaporthe oryzae	38.57	9.00e-112	397.00
IUUC-Mpo-057533	Magnaporthe poae	50.71	2.00e-112	399.00
IUUC-Mtr-057950	Medicago truncatula	62.39	9.00e-136	477.00
IUUC-Mla-058910	Melampsora laricipopulina	47.22	4.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	93.92	0.00e+00	1024.00
IUUC-Mvi-060349	Microbotryum violaceum	58.94	9.00e-137	480.00
IUUC-Mmr-061209	Microcebus murinus	98.56	0.00e+00	1122.00
IUUC-Mdo-062118	Monodelphis domestica	95.85	0.00e+00	1100.00
IUUC-Mmu-063173	Mus musculus	98.38	0.00e+00	1084.00
IUUC-Mac-065080	Musa acuminata	49.64	4.00e-152	531.00
IUUC-Mpu-066659	Mustela putorius furo	98.19	0.00e+00	1085.00
IUUC-Mlu-067029	Myotis lucifugus	97.65	0.00e+00	1056.00
IUUC-Nfi-068334	Neosartorya fischeri	44.49	3.00e-132	465.00
IUUC-Ncr-068675	Neurospora crassa	38.46	3.00e-103	369.00
IUUC-Nle-070113	Nomascus leucogenys	97.65	0.00e+00	1081.00
IUUC-Opr-070685	Ochotona princeps	89.89	0.00e+00	1030.00
IUUC-Ont-071680	Oreochromis niloticus	84.15	0.00e+00	971.00
IUUC-Oan-073573	Ornithorhynchus anatinus	96.47	0.00e+00	957.00
IUUC-Ocu-074074	Oryctolagus cuniculus	98.01	0.00e+00	1116.00
IUUC-Oba-075625	Oryza barthii	49.82	1.00e-147	516.00
IUUC-Obr-076510	Oryza brachyantha	51.80	6.00e-148	517.00
IUUC-Ogl-077275	Oryza glaberrima	49.82	1.00e-147	516.00
IUUC-Ogu-078563	Oryza glumaepatula	49.82	1.00e-147	516.00
IUUC-Oin-079898	Oryza indica	63.74	2.00e-135	475.00
IUUC-Olo-081080	Oryza longistaminata	52.01	3.00e-142	498.00
IUUC-Oni-083121	Oryza nivara	49.82	1.00e-147	516.00
IUUC-Opu-083329	Oryza punctata	51.62	5.00e-147	514.00
IUUC-Oru-084807	Oryza rufipogon	49.22	3.00e-129	454.00
IUUC-Osa-086039	Oryza sativa	49.91	3.00e-148	518.00
IUUC-Ola-087149	Oryzias latipes	83.42	0.00e+00	964.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.38	3.00e-120	425.00
IUUC-Oga-088359	Otolemur garnettii	98.19	0.00e+00	1084.00
IUUC-Oar-089390	Ovis aries	98.38	0.00e+00	1083.00
IUUC-Ptr-090894	Pan troglodytes	98.01	0.00e+00	1083.00
IUUC-Pan-092476	Papio anubis	98.38	0.00e+00	1086.00
IUUC-Psi-093527	Pelodiscus sinensis	92.56	0.00e+00	981.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.19	8.00e-113	400.00
IUUC-Ppa-095386	Physcomitrella patens	51.33	1.00e-153	536.00
IUUC-Pfo-096139	Poecilia formosa	85.79	0.00e+00	984.00
IUUC-Pab-097838	Pongo abelii	97.98	0.00e+00	960.00
IUUC-Pop-098945	Populus trichocarpa	51.31	1.00e-151	529.00
IUUC-Pca-100876	Procavia capensis	83.75	0.00e+00	940.00
IUUC-Ppe-101777	Prunus persica	50.84	6.00e-150	524.00
IUUC-Pva-102418	Pteropus vampyrus	97.65	0.00e+00	1080.00
IUUC-Pgr-103456	Puccinia graminis	50.18	7.00e-159	553.00
IUUC-Ptt-103731	Puccinia triticina	46.22	3.00e-145	508.00
IUUC-Pte-104386	Pyrenophora teres	49.88	3.00e-114	405.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.49	4.00e-114	404.00
IUUC-Rno-105694	Rattus norvegicus	93.86	0.00e+00	1014.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.63	2.00e-75	275.00
IUUC-Sha-106709	Sarcophilus harrisii	96.03	0.00e+00	1099.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.38	1.00e-124	440.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.36	2.00e-123	435.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	47.48	3.00e-116	411.00
IUUC-Smo-108778	Selaginella moellendorffii	44.57	2.00e-124	439.00
IUUC-Sit-110446	Setaria italica	48.44	4.00e-144	504.00
IUUC-Sly-111330	Solanum lycopersicum	50.94	2.00e-149	522.00
IUUC-Stu-112610	Solanum tuberosum	50.18	4.00e-150	524.00
IUUC-Sar-113065	Sorex araneus	78.15	9.00e-126	443.00
IUUC-Sbi-114005	Sorghum bicolor	63.74	2.00e-135	475.00
IUUC-Sre-114988	Sporisorium reilianum	50.19	1.00e-157	550.00
IUUC-Ssc-115760	Sus scrofa	98.74	0.00e+00	1092.00
IUUC-Tgu-116493	Taeniopygia guttata	95.18	0.00e+00	1035.00
IUUC-Tru-118489	Takifugu rubripes	81.75	0.00e+00	949.00
IUUC-Tsy-119332	Tarsius syrichta	98.01	0.00e+00	1117.00
IUUC-Tni-120202	Tetraodon nigroviridis	78.40	0.00e+00	879.00
IUUC-Tca-121429	Theobroma cacao	62.97	8.00e-136	477.00
IUUC-Tre-122162	Trichoderma reesei	43.07	4.00e-124	438.00
IUUC-Tvi-122500	Trichoderma virens	42.83	1.00e-122	433.00
IUUC-Tae-125557	Triticum aestivum	49.52	4.00e-144	504.00
IUUC-Tur-126554	Triticum urartu	49.43	4.00e-142	498.00
IUUC-Tme-126919	Tuber melanosporum	45.69	3.00e-139	488.00
IUUC-Tbe-127968	Tupaia belangeri	92.96	0.00e+00	1043.00
IUUC-Ttr-129215	Tursiops truncatus	97.83	0.00e+00	1075.00
IUUC-Uma-129622	Ustilago maydis	49.46	2.00e-160	559.00
IUUC-Vda-129750	Verticillium dahliae	44.27	5.00e-124	437.00
IUUC-Vpa-130617	Vicugna pacos	95.56	0.00e+00	971.00
IUUC-Vvi-131238	Vitis vinifera	61.81	2.00e-134	472.00
IUUC-Xtr-131865	Xenopus tropicalis	89.93	0.00e+00	1009.00
IUUC-Xma-133627	Xiphophorus maculatus	85.97	0.00e+00	987.00
IUUC-Yli-134390	Yarrowia lipolytica	45.76	1.00e-116	413.00
IUUC-Zma-135925	Zea mays	50.86	4.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence