iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118489

Ensembl Protein ID

ENSTRUP00000047118.1

UniProt Accession

H2VD24; H2VD24_TAKRU

Protein Name

Uncharacterized protein

Gene Name

cdc40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000018412.1	ENSTRUT00000047277.1	ENSTRUP00000047118.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-34	117.3	419	449
UBD/Beta-Prp	2.90e-46	159.2	281	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H + v+ + f ++ +++vs sdD++++vW++
   Q: 419  HLGAVNTITFvDEnRRFVSTSDDKSLRVWEW 449
           8899******966699*************96 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v  ++++p sg+ l+s s d  i++w++ + + c++ t+ gh+++v+ ++++ +g+ + s+++Dr ++lWd++tgk+
   Q: 281  KQLHVWSGHTKGVSGIRLFPkSGHLLLSCSMDCKIKLWEVYKeRRCIR-TFIGHSKAVRDICFNNTGSQFLSAAYDRYLKLWDSETGKC 368
           7899****************777****************965156666.**************************************** PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
           + ++t  + +  y+++f+++    + +v+g  d+++  wd++tge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  d
   Q: 369  ISHFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDVRTGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWewD 450
           ****8..5888899999999888899******************************************************9334 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSAAISSLVS YGSDSDPEND SESNKSTEKE DQTHPDATAH LQPLESGHTM SLALLNAAPE 60
VPVKEAVMTG SYLDPSLKEV AFNPTFETMF SPEFGPTNPF NNQQMAAARN MLSGYAEPAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAGATGT CTGCCGCCAT ATCTTCCCTC GTTTCCTACG GGAGCGATTC TGATCCTGAA 60
AATGATTCGG AATCTAACAA AAGCACCGAA AAAGAGGACC AAACGCACCC AGACGCCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

tru:101078627

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	49.52	4.00e-145	508.00
IUUC-Aml-002243	Ailuropoda melanoleuca	78.02	0.00e+00	658.00
IUUC-Atr-002502	Amborella trichopoda	49.53	6.00e-154	537.00
IUUC-Apl-003885	Anas platyrhynchos	83.02	0.00e+00	927.00
IUUC-Aca-004854	Anolis carolinensis	60.70	0.00e+00	662.00
IUUC-Aly-006158	Arabidopsis lyrata	49.34	6.00e-152	530.00
IUUC-Ath-007474	Arabidopsis thaliana	49.72	2.00e-151	529.00
IUUC-Ago-007726	Ashbya gossypii	36.57	3.00e-70	259.00
IUUC-Acl-008220	Aspergillus clavatus	43.32	7.00e-132	464.00
IUUC-Afl-008473	Aspergillus flavus	43.01	2.00e-128	452.00
IUUC-Afu-008773	Aspergillus fumigatus	42.83	9.00e-130	457.00
IUUC-Ani-009323	Aspergillus nidulans	42.33	2.00e-115	409.00
IUUC-Ang-009851	Aspergillus niger	42.55	4.00e-129	455.00
IUUC-Aor-009950	Aspergillus oryzae	43.01	2.00e-128	452.00
IUUC-Ate-010372	Aspergillus terreus	42.68	2.00e-130	459.00
IUUC-Ame-011660	Astyanax mexicanus	85.74	0.00e+00	1018.00
IUUC-Bgr-012230	Blumeria graminis	43.58	2.00e-123	436.00
IUUC-Bta-012568	Bos taurus	81.68	0.00e+00	923.00
IUUC-Bci-013646	Botrytis cinerea	44.40	1.00e-122	432.00
IUUC-Bdi-014199	Brachypodium distachyon	49.13	1.00e-143	503.00
IUUC-Bol-015695	Brassica oleracea	49.15	1.00e-156	546.00
IUUC-Bra-017923	Brassica rapa	48.29	2.00e-157	549.00
IUUC-Cel-018535	Caenorhabditis elegans	50.54	3.00e-177	614.00
IUUC-Cja-019071	Callithrix jacchus	81.68	0.00e+00	921.00
IUUC-Cfa-020559	Canis familiaris	81.68	0.00e+00	922.00
IUUC-Cpo-022356	Cavia porcellus	81.87	0.00e+00	922.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	42.86	2.00e-76	278.00
IUUC-Csa-023125	Chlorocebus sabaeus	81.68	0.00e+00	923.00
IUUC-Cho-024676	Choloepus hoffmanni	77.18	0.00e+00	840.00
IUUC-Cin-025229	Ciona intestinalis	68.32	0.00e+00	738.00
IUUC-Csv-025868	Ciona savignyi	73.12	8.00e-40	154.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	40.50	7.00e-107	380.00
IUUC-Cne-026885	Cryptococcus neoformans	49.54	3.00e-148	518.00
IUUC-Dre-027631	Danio rerio	85.03	0.00e+00	1026.00
IUUC-Dno-029815	Dasypus novemcinctus	73.50	0.00e+00	848.00
IUUC-Dor-030978	Dipodomys ordii	80.86	0.00e+00	734.00
IUUC-Dse-031520	Dothistroma septosporum	39.65	7.00e-97	347.00
IUUC-Dme-032050	Drosophila melanogaster	63.17	0.00e+00	738.00
IUUC-Ete-032866	Echinops telfairi	79.85	0.00e+00	901.00
IUUC-Eca-033384	Equus caballus	81.50	0.00e+00	916.00
IUUC-Eeu-034471	Erinaceus europaeus	68.68	0.00e+00	698.00
IUUC-Fca-035727	Felis catus	81.68	0.00e+00	924.00
IUUC-Fal-036774	Ficedula albicollis	83.94	0.00e+00	938.00
IUUC-Fox-037951	Fusarium oxysporum	41.73	3.00e-126	445.00
IUUC-Fso-038287	Fusarium solani	42.08	6.00e-124	437.00
IUUC-Gmo-039670	Gadus morhua	83.30	0.00e+00	1000.00
IUUC-Ggr-039764	Gaeumannomyces graminis	38.94	3.00e-114	405.00
IUUC-Gga-040293	Gallus gallus	84.17	0.00e+00	939.00
IUUC-Gac-042159	Gasterosteus aculeatus	84.56	0.00e+00	1045.00
IUUC-Gma-044299	Glycine max	62.46	7.00e-136	477.00
IUUC-Ggo-044864	Gorilla gorilla	81.87	0.00e+00	924.00
IUUC-Hsa-046602	Homo sapiens	81.87	0.00e+00	924.00
IUUC-Hvu-047431	Hordeum vulgare	29.25	7.00e-39	154.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	87.32	0.00e+00	747.00
IUUC-Kpa-049318	Komagataella pastoris	44.16	4.00e-95	342.00
IUUC-Lch-049796	Latimeria chalumnae	72.94	0.00e+00	821.00
IUUC-Lpe-051153	Leersia perrieri	50.86	1.00e-146	513.00
IUUC-Loc-052467	Lepisosteus oculatus	87.20	0.00e+00	1012.00
IUUC-Lma-053107	Leptosphaeria maculans	48.51	2.00e-112	399.00
IUUC-Laf-053787	Loxodonta africana	81.75	0.00e+00	949.00
IUUC-Mcc-055706	Macaca mulatta	81.68	0.00e+00	923.00
IUUC-Meu-056757	Macropus eugenii	83.58	3.00e-168	585.00
IUUC-Mor-057079	Magnaporthe oryzae	38.15	1.00e-114	406.00
IUUC-Mpo-057533	Magnaporthe poae	50.14	2.00e-111	395.00
IUUC-Mtr-057950	Medicago truncatula	46.15	7.00e-144	504.00
IUUC-Mla-058910	Melampsora laricipopulina	45.85	2.00e-146	513.00
IUUC-Mga-059366	Meleagris gallopavo	83.69	0.00e+00	937.00
IUUC-Mvi-060349	Microbotryum violaceum	58.44	3.00e-138	485.00
IUUC-Mmr-061209	Microcebus murinus	81.87	0.00e+00	952.00
IUUC-Mdo-062118	Monodelphis domestica	81.14	0.00e+00	951.00
IUUC-Mmu-063173	Mus musculus	81.87	0.00e+00	925.00
IUUC-Mac-065080	Musa acuminata	50.98	5.00e-152	531.00
IUUC-Mpu-066659	Mustela putorius furo	81.68	0.00e+00	924.00
IUUC-Mlu-067029	Myotis lucifugus	84.56	0.00e+00	909.00
IUUC-Nfi-068334	Neosartorya fischeri	43.53	4.00e-131	461.00
IUUC-Ncr-068675	Neurospora crassa	35.74	2.00e-102	366.00
IUUC-Nle-070113	Nomascus leucogenys	81.32	0.00e+00	919.00
IUUC-Opr-070685	Ochotona princeps	75.64	0.00e+00	879.00
IUUC-Ont-071680	Oreochromis niloticus	86.75	0.00e+00	1046.00
IUUC-Oan-073573	Ornithorhynchus anatinus	84.41	0.00e+00	868.00
IUUC-Ocu-074074	Oryctolagus cuniculus	81.68	0.00e+00	952.00
IUUC-Oba-075625	Oryza barthii	50.77	2.00e-146	512.00
IUUC-Obr-076510	Oryza brachyantha	51.14	4.00e-147	514.00
IUUC-Ogl-077275	Oryza glaberrima	50.77	2.00e-146	512.00
IUUC-Ogu-078563	Oryza glumaepatula	50.77	2.00e-146	512.00
IUUC-Oin-079898	Oryza indica	62.28	5.00e-133	467.00
IUUC-Olo-081080	Oryza longistaminata	51.72	3.00e-139	488.00
IUUC-Ome-081794	Oryza meridionalis	31.95	6.00e-30	124.00
IUUC-Oni-083121	Oryza nivara	50.77	2.00e-146	512.00
IUUC-Opu-083329	Oryza punctata	50.86	3.00e-146	511.00
IUUC-Oru-084807	Oryza rufipogon	50.42	4.00e-129	454.00
IUUC-Osa-086039	Oryza sativa	50.86	4.00e-147	514.00
IUUC-Ola-087149	Oryzias latipes	86.23	0.00e+00	1018.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.30	8.00e-119	420.00
IUUC-Oga-088359	Otolemur garnettii	81.68	0.00e+00	924.00
IUUC-Oar-089390	Ovis aries	81.68	0.00e+00	922.00
IUUC-Ptr-090894	Pan troglodytes	81.87	0.00e+00	924.00
IUUC-Pan-092476	Papio anubis	81.68	0.00e+00	923.00
IUUC-Psi-093527	Pelodiscus sinensis	80.81	0.00e+00	882.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.88	6.00e-113	400.00
IUUC-Ppa-095386	Physcomitrella patens	50.19	1.00e-152	533.00
IUUC-Pfo-096139	Poecilia formosa	88.47	0.00e+00	1056.00
IUUC-Pab-097838	Pongo abelii	81.11	0.00e+00	810.00
IUUC-Pop-099962	Populus trichocarpa	50.84	3.00e-153	535.00
IUUC-Pca-100876	Procavia capensis	69.23	0.00e+00	787.00
IUUC-Ppe-101777	Prunus persica	50.19	3.00e-149	522.00
IUUC-Pva-102418	Pteropus vampyrus	81.14	0.00e+00	920.00
IUUC-Pgr-103456	Puccinia graminis	49.63	5.00e-156	544.00
IUUC-Ptt-103731	Puccinia triticina	45.19	3.00e-143	502.00
IUUC-Pte-104386	Pyrenophora teres	50.12	6.00e-114	404.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.12	4.00e-114	404.00
IUUC-Rno-105694	Rattus norvegicus	77.47	0.00e+00	858.00
IUUC-Sce-106339	Saccharomyces cerevisiae	39.08	3.00e-75	275.00
IUUC-Sha-106709	Sarcophilus harrisii	81.32	0.00e+00	951.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	39.58	1.00e-122	433.00
IUUC-Spo-108331	Schizosaccharomyces pombe	41.25	1.00e-118	420.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	44.76	2.00e-115	409.00
IUUC-Smo-108778	Selaginella moellendorffii	44.49	1.00e-129	456.00
IUUC-Sit-110446	Setaria italica	50.67	1.00e-145	509.00
IUUC-Sly-111330	Solanum lycopersicum	61.27	3.00e-135	475.00
IUUC-Stu-112610	Solanum tuberosum	48.31	4.00e-149	521.00
IUUC-Sar-113065	Sorex araneus	61.46	5.00e-101	361.00
IUUC-Sbi-114005	Sorghum bicolor	51.05	7.00e-146	510.00
IUUC-Sre-114988	Sporisorium reilianum	49.17	4.00e-155	541.00
IUUC-Ssc-115760	Sus scrofa	81.68	0.00e+00	923.00
IUUC-Tgu-116493	Taeniopygia guttata	84.75	0.00e+00	946.00
IUUC-Tsy-119332	Tarsius syrichta	84.02	0.00e+00	952.00
IUUC-Tni-120202	Tetraodon nigroviridis	91.30	0.00e+00	1016.00
IUUC-Tca-121429	Theobroma cacao	48.32	5.00e-149	521.00
IUUC-Tre-122162	Trichoderma reesei	41.73	2.00e-123	436.00
IUUC-Tvi-122500	Trichoderma virens	41.10	1.00e-121	429.00
IUUC-Tae-125557	Triticum aestivum	49.42	4.00e-144	504.00
IUUC-Tur-126554	Triticum urartu	49.32	4.00e-142	498.00
IUUC-Tme-126919	Tuber melanosporum	46.52	3.00e-139	488.00
IUUC-Tbe-127968	Tupaia belangeri	77.29	0.00e+00	887.00
IUUC-Ttr-129215	Tursiops truncatus	81.50	0.00e+00	917.00
IUUC-Uma-129622	Ustilago maydis	47.68	8.00e-155	540.00
IUUC-Vda-129750	Verticillium dahliae	42.86	1.00e-121	430.00
IUUC-Vpa-130617	Vicugna pacos	82.40	0.00e+00	872.00
IUUC-Vvi-131238	Vitis vinifera	60.93	2.00e-133	469.00
IUUC-Xtr-131865	Xenopus tropicalis	79.73	0.00e+00	953.00
IUUC-Xma-133627	Xiphophorus maculatus	87.95	0.00e+00	1058.00
IUUC-Yli-134390	Yarrowia lipolytica	45.96	3.00e-117	415.00
IUUC-Zma-135925	Zea mays	51.43	3.00e-141	495.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence