iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087442

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04061246

Gene Name

smu1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000006283.1	ENSORLT00000007897.1	ENSORLP00000007896.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-33	113.2	345	382
UBD/Beta-Prp	3.20e-52	177.8	212	505

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++ af  d  +++s+s Dg++k+W+++++ ++
   Q: 345  GHSSFVNDAAFiRDgSHIISASSDGSVKIWNIKSCECI 382
           8***********8879***************9999886 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           h+  ++c  fspd+++l+tgs dg i+vw++ tgk           s+   +++v +++fs+d+++l+tg++ + ikvw +++g c++ 
   Q: 212  HS-HVRCARFSPDGRYLITGSVDGFIEVWNFNTGKInkdlkyqaQDSFMMMDDAVLCMCFSQDTDMLATGAQNGKIKVWKIQSGLCLRR 299
           44.5667*****************************555555555555555555*********************************** PP
   S: 90   lk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
           ++ +h++ v++lsfs++++ ++sGs d+t+r+ +l++g+ l+  l+gh+++vn +++  dg+ ++s+s D+ v++W++k+ +++  l+ 
   Q: 300  FEhAHNKGVTCLSFSKDNSQILSGSFDQTLRIHELRSGKTLK-ELNGHSSFVNDAAFIRDGSHIISASSDGSVKIWNIKSCECISNLSA 387
           *999**************************************.********************************************99 PP
   S: 178  ghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnght...dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
           +   +v+ ++ + +n +++v + + +tv + ++  g++v+t++  +    n+ +  +sp++e+++++++D +++++ + +g l ktl+ 
   Q: 388  APSIPVNNVIpLPQNPQHFVVCNQSSTVAVMSM-LGQTVKTFTPDRsqtVNFVCCTTSPRGEWIYCVGEDCVLYCFKYSTGRLEKTLTV 475
           9999999998788888*****************.666789988755322556677888******************************* PP
   S: 263  hnssvisvavlsfgdnvlvlgsedskvniwk 293
           h++ vi va+ ++ +n l++ ++d+ +++wk
   Q: 476  HEKDVIGVAH-HPHENLLATYGGDGLLRLWK 505
           **********.*******************8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

LTVSSDFYSV IRLIMQYLKE NNLYRTLSTL QEETTVSLNT VESFESFIAD INRGHWDSVL 60
LAIESLKLPD NTLTDLYEQV VIELIEMREV GAARALLRQT DPMIMLKQTQ PEKYSRLEKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAACAGTTA GCTCTGACTT CTACAGTGTG ATCCGCCTCA TAATGCAGTA CCTGAAGGAA 60
AACAACCTCT ACCGCACGCT GAGCACCTTG CAAGAAGAAA CCACCGTCTC ACTCAACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gac-042232	Gasterosteus aculeatus	77.20	0.00e+00	826.00
IUUC-Ont-071251	Oreochromis niloticus	82.17	0.00e+00	808.00
IUUC-Pfo-097219	Poecilia formosa	79.48	0.00e+00	844.00
IUUC-Tru-117648	Takifugu rubripes	78.40	0.00e+00	801.00
IUUC-Tni-119725	Tetraodon nigroviridis	78.64	0.00e+00	803.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence