iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100004

Ensembl Protein ID

POPTR_0006s00350.1

UniProt Accession

B9HBZ6; B9HBZ6_POPTR

Genbank Protein ID

EEE92261.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_560059; POPTR_0006s00350g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s00350	POPTR_0006s00350.1	POPTR_0006s00350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-08	33.6	426	446

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sdtllvsGsdDgtikvWD 29
           +++ + t+l+s+s Dg++k+W+
   Q: 426  CQWmT-TRLASASTDGVVKIWE 446
           46855.99*************5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASPGIPHQQ GGGGVIGGGG GGFDMNKLLK PSSANPMSIM QPPNQQQQQG PSPNSNTITT 60
ENLTTSPSFP LPSSSPPYLT PSSSYPPPTG PYHPFHHPHY LSPYPPPPPP FQQLHNQFLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGGGGAG AGAGAGAGAG AGAGATAAAG GAGTGTCCTC CCCTCTCTGA TCTGAAAATG 60
ATTCAAACTT GAACGGATCC ATGAATCCCT TCACTCTGTA AGCCTTTTCA AATCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

pop:POPTR_0006s00350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	51.03	0.00e+00	1130.00
IUUC-Bdi-014662	Brachypodium distachyon	51.75	0.00e+00	1082.00
IUUC-Gma-044019	Glycine max	63.28	0.00e+00	1375.00
IUUC-Hvu-047656	Hordeum vulgare	51.36	0.00e+00	1133.00
IUUC-Lpe-051603	Leersia perrieri	50.68	0.00e+00	1058.00
IUUC-Ont-071856	Oreochromis niloticus	40.38	1.00e-04	40.00
IUUC-Oba-075599	Oryza barthii	51.23	0.00e+00	1116.00
IUUC-Obr-076020	Oryza brachyantha	51.84	0.00e+00	1118.00
IUUC-Ogl-077923	Oryza glaberrima	51.61	0.00e+00	1111.00
IUUC-Ogu-079010	Oryza glumaepatula	51.31	0.00e+00	1105.00
IUUC-Olo-080788	Oryza longistaminata	51.18	0.00e+00	1121.00
IUUC-Ome-081610	Oryza meridionalis	51.53	0.00e+00	1115.00
IUUC-Oni-082533	Oryza nivara	51.23	0.00e+00	1118.00
IUUC-Opu-083811	Oryza punctata	51.37	0.00e+00	1115.00
IUUC-Oru-084729	Oryza rufipogon	51.69	0.00e+00	1117.00
IUUC-Osa-086170	Oryza sativa	51.53	0.00e+00	1113.00
IUUC-Sit-110590	Setaria italica	50.42	0.00e+00	1147.00
IUUC-Sly-111353	Solanum lycopersicum	60.58	0.00e+00	1327.00
IUUC-Sbi-114653	Sorghum bicolor	51.04	0.00e+00	1124.00
IUUC-Tca-121627	Theobroma cacao	70.41	0.00e+00	1595.00
IUUC-Tae-125495	Triticum aestivum	50.00	0.00e+00	1092.00
IUUC-Tur-126244	Triticum urartu	48.18	0.00e+00	1010.00
IUUC-Vvi-131361	Vitis vinifera	70.99	0.00e+00	1604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence