iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090514

Ensembl Protein ID

ENSPTRP00000020740.2

UniProt Accession

H2QI60; H2QI60_PANTR

Genbank Protein ID

JAA08312.1

Protein Name

WD repeat domain 54

Genbank Nucleotide ID

AACZ03013170

Gene Name

WDR54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000012085.3	ENSPTRT00000022477.2	ENSPTRP00000020740.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-07	32.0	251	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H+  +++l++ s+ + l+s++ D  +++W l+
   Q: 251  HARAICALDLaSEvGKLLSAGEDTFVHIWKLS 282
           8999*******999***************986 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MFRWERSIPL RGSAAALCNN LSVLQLPARN LTYFGVVHGP SAQLLSAAPE GVPLAQRQLH 60
AKEGAGVSPP LITQVHWCVL PFRVLLVLTS HRGIQMYESN GYTMVYWHAL DSGDASPVQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCGTACGT GCGTCGTCTC TATGGTGGCG GCGGATTTGG AGGGACCCTA CGAACCAGGA 60
GTCAGGCGAG CCGATCTGGG GCTGCAGGTG TTACCTCTGA TCTAGGCCGG GGGCTTCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002321	Ailuropoda melanoleuca	89.82	1.00e-180	625.00
IUUC-Apl-003720	Anas platyrhynchos	62.73	2.00e-39	153.00
IUUC-Aca-004770	Anolis carolinensis	58.75	2.00e-113	402.00
IUUC-Ame-011411	Astyanax mexicanus	55.99	1.00e-110	392.00
IUUC-Bta-013393	Bos taurus	87.72	1.00e-174	605.00
IUUC-Cja-019556	Callithrix jacchus	94.64	1.00e-147	515.00
IUUC-Cfa-020464	Canis familiaris	89.49	7.00e-180	622.00
IUUC-Cpo-022511	Cavia porcellus	87.13	4.00e-173	600.00
IUUC-Csa-023147	Chlorocebus sabaeus	98.20	0.00e+00	677.00
IUUC-Dno-030065	Dasypus novemcinctus	90.45	6.00e-179	619.00
IUUC-Eca-034322	Equus caballus	91.32	0.00e+00	629.00
IUUC-Fca-036340	Felis catus	90.42	4.00e-180	623.00
IUUC-Fal-036767	Ficedula albicollis	60.39	2.00e-93	335.00
IUUC-Gmo-038580	Gadus morhua	55.82	3.00e-110	391.00
IUUC-Gga-040894	Gallus gallus	61.49	1.00e-116	413.00
IUUC-Ggo-045105	Gorilla gorilla	98.80	0.00e+00	684.00
IUUC-Hsa-046813	Homo sapiens	99.40	0.00e+00	686.00
IUUC-Itr-048544	Ictidomys tridecemlineatus	90.42	0.00e+00	626.00
IUUC-Loc-052885	Lepisosteus oculatus	59.69	4.00e-72	263.00
IUUC-Laf-053771	Loxodonta africana	87.72	3.00e-175	607.00
IUUC-Mcc-055202	Macaca mulatta	98.20	0.00e+00	677.00
IUUC-Meu-056088	Macropus eugenii	75.75	2.00e-150	525.00
IUUC-Mga-059459	Meleagris gallopavo	66.44	5.00e-56	209.00
IUUC-Mmr-061162	Microcebus murinus	92.81	0.00e+00	641.00
IUUC-Mdo-061970	Monodelphis domestica	73.95	3.00e-150	523.00
IUUC-Mmu-063111	Mus musculus	88.62	6.00e-169	586.00
IUUC-Mpu-065776	Mustela putorius furo	87.72	6.00e-176	609.00
IUUC-Nle-069469	Nomascus leucogenys	98.85	2.00e-154	537.00
IUUC-Opr-071220	Ochotona princeps	84.73	2.00e-166	577.00
IUUC-Ont-071856	Oreochromis niloticus	55.26	6.00e-108	383.00
IUUC-Ocu-074448	Oryctolagus cuniculus	87.13	2.00e-172	597.00
IUUC-Ola-087082	Oryzias latipes	56.29	2.00e-109	388.00
IUUC-Oga-088212	Otolemur garnettii	91.62	0.00e+00	635.00
IUUC-Oar-089264	Ovis aries	83.83	3.00e-163	567.00
IUUC-Pan-092685	Papio anubis	98.20	0.00e+00	677.00
IUUC-Psi-093871	Pelodiscus sinensis	63.32	2.00e-69	254.00
IUUC-Pma-094659	Petromyzon marinus	57.49	8.00e-103	366.00
IUUC-Pfo-096872	Poecilia formosa	55.86	9.00e-108	383.00
IUUC-Pab-098638	Pongo abelii	99.10	0.00e+00	683.00
IUUC-Pca-100980	Procavia capensis	82.80	2.00e-136	477.00
IUUC-Pva-102655	Pteropus vampyrus	89.82	5.00e-180	622.00
IUUC-Rno-105603	Rattus norvegicus	88.32	3.00e-175	607.00
IUUC-Sha-107647	Sarcophilus harrisii	79.14	4.00e-154	536.00
IUUC-Sar-113046	Sorex araneus	70.55	1.00e-113	402.00
IUUC-Ssc-115370	Sus scrofa	91.32	0.00e+00	632.00
IUUC-Ttr-129206	Tursiops truncatus	90.72	0.00e+00	626.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence