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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007548
Ensembl Protein ID AT4G31160.1
UniProt Accession Q9M086; Q8GX50; DCAF1_ARATH
Genbank Protein ID CAB79834.1; AEE85867.1; BAC43043.1
Protein Name DDB1- and CUL4-associated factor homolog 1; Protein DDB1-CUL4 ASSOCIATED FACTOR 1
Genbank Nucleotide ID AL049914; CP002687; AK118434
Gene Name DCAF1; At4g31160; F6E21_80
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G31160 AT4G31160.1 AT4G31160.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINAHINTMentha
Post-translational Modifications (PTMs)
dbPPTdbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/DCX/DWD 37.86 1.00e-64 247.00 IUUC-Hsa-046935
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Component of the CUL4-RBX1-DDB1-DCAF1 E3 ubiquitin-protein ligase complex, DCAF1 may function as the substrate recognition module within this complex. Appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.
 Component of the CUL4-RBX1-DDB1-DCAF1 E3 ubiquitin-protein ligase complex, DCAF1 may function as the substrate recognition module within this complex. Appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.
Protein Sequence
(Fasta)
MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED 60
ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS HNSGKLCILI RENDEFFELI 120
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Protein Fasta Sequence


>IUUC-Ath-007548|E3,WD_repeat|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
ACAATTGAAA ACGACGTCGT AGTTATTGAC AGTAAAACTA TGGGCCTTTA AAAGGCCCAT 60
TATTAAAAAA AACTATGGGT TAGGGTTTGT TTAGTGAAAG AAACGGGTCG GGTCATATTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007548|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat
Interpro

IPR011989--ARM-like
IPR006594--LisH
IPR033270--VPRBP/DCAF1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
PROSITE

PS50896--LISH
PS50294--WD_REPEATS_REGION
Pfam

PF08513--LisH
SMART

SM00667--LisH
Gene Ontology

GO:0005634--C:nucleus
GO:0009793--P:embryo development ending in seed dormancy
GO:0009908--P:flower development
GO:0010154--P:fruit development
GO:0048366--P:leaf development
GO:0048827--P:phyllome development
GO:0016567--P:protein ubiquitination
GO:0048367--P:shoot system development
KEGG ath:AT4G31160
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000876 Aegilops tauschii 46.50 0.00e+00 1275.00
IUUC-Aml-001487 Ailuropoda melanoleuca 37.86 4.00e-66 246.00
IUUC-Apl-004137 Anas platyrhynchos 37.14 4.00e-64 239.00
IUUC-Aca-004721 Anolis carolinensis 37.14 3.00e-63 237.00
IUUC-Ame-011378 Astyanax mexicanus 37.23 2.00e-64 241.00
IUUC-Bta-012499 Bos taurus 37.62 1.00e-64 241.00
IUUC-Bdi-014023 Brachypodium distachyon 47.02 0.00e+00 1219.00
IUUC-Bra-017818 Brassica rapa 83.00 0.00e+00 2627.00
IUUC-Cel-018657 Caenorhabditis elegans 28.27 3.00e-39 157.00
IUUC-Cja-019341 Callithrix jacchus 37.71 3.00e-66 247.00
IUUC-Cfa-020745 Canis familiaris 37.86 3.00e-66 246.00
IUUC-Cpo-021525 Cavia porcellus 37.62 5.00e-66 246.00
IUUC-Csa-023213 Chlorocebus sabaeus 37.86 3.00e-66 247.00
IUUC-Cin-025759 Ciona intestinalis 28.19 9.00e-48 185.00
IUUC-Dno-029592 Dasypus novemcinctus 37.86 3.00e-66 246.00
IUUC-Dme-031706 Drosophila melanogaster 29.74 3.00e-43 170.00
IUUC-Ete-033014 Echinops telfairi 37.73 1.00e-51 198.00
IUUC-Eca-034424 Equus caballus 37.86 5.00e-66 246.00
IUUC-Eeu-034747 Erinaceus europaeus 37.23 1.00e-63 238.00
IUUC-Fca-035608 Felis catus 37.86 5.00e-66 246.00
IUUC-Fal-037661 Ficedula albicollis 37.14 4.00e-64 239.00
IUUC-Gmo-039173 Gadus morhua 29.23 5.00e-42 166.00
IUUC-Gga-040754 Gallus gallus 37.14 3.00e-64 240.00
IUUC-Gac-042394 Gasterosteus aculeatus 29.48 2.00e-42 167.00
IUUC-Gma-043360 Glycine max 58.86 0.00e+00 956.00
IUUC-Ggo-044876 Gorilla gorilla 37.86 4.00e-66 246.00
IUUC-Hsa-046935 Homo sapiens 37.86 3.00e-66 247.00
IUUC-Hvu-047505 Hordeum vulgare 48.12 0.00e+00 1233.00
IUUC-Lch-050623 Latimeria chalumnae 39.08 2.00e-67 251.00
IUUC-Lpe-051488 Leersia perrieri 48.32 0.00e+00 1297.00
IUUC-Loc-052384 Lepisosteus oculatus 37.47 1.00e-66 248.00
IUUC-Laf-053421 Loxodonta africana 37.86 5.00e-66 246.00
IUUC-Mcc-055301 Macaca mulatta 37.86 4.00e-66 246.00
IUUC-Meu-056281 Macropus eugenii 37.86 9.00e-66 245.00
IUUC-Mtr-058027 Medicago truncatula 58.46 0.00e+00 1081.00
IUUC-Mga-059987 Meleagris gallopavo 37.14 3.00e-64 240.00
IUUC-Mmr-060718 Microcebus murinus 37.86 3.00e-66 246.00
IUUC-Mdo-062744 Monodelphis domestica 37.86 1.00e-65 245.00
IUUC-Mmu-063088 Mus musculus 37.62 9.00e-65 242.00
IUUC-Mpu-066788 Mustela putorius furo 37.86 4.00e-66 246.00
IUUC-Mlu-067568 Myotis lucifugus 36.80 2.00e-62 234.00
IUUC-Nle-069773 Nomascus leucogenys 37.86 2.00e-66 247.00
IUUC-Opr-070786 Ochotona princeps 32.52 3.00e-46 180.00
IUUC-Ont-072210 Oreochromis niloticus 36.12 3.00e-61 230.00
IUUC-Ocu-074945 Oryctolagus cuniculus 37.38 3.00e-65 243.00
IUUC-Olo-080575 Oryza longistaminata 45.32 0.00e+00 1103.00
IUUC-Ome-081217 Oryza meridionalis 47.59 0.00e+00 1295.00
IUUC-Opu-083522 Oryza punctata 47.76 0.00e+00 1303.00
IUUC-Ola-087313 Oryzias latipes 36.89 4.00e-64 240.00
IUUC-Olu-087714 Ostreococcus lucimarinus 37.53 6.00e-65 242.00
IUUC-Oga-088943 Otolemur garnettii 32.21 1.00e-43 172.00
IUUC-Oar-089356 Ovis aries 37.62 1.00e-64 241.00
IUUC-Psi-093315 Pelodiscus sinensis 36.74 8.00e-64 238.00
IUUC-Ppa-095994 Physcomitrella patens 47.93 0.00e+00 1024.00
IUUC-Pfo-097433 Poecilia formosa 35.33 8.00e-65 242.00
IUUC-Pab-098284 Pongo abelii 35.28 2.00e-58 221.00
IUUC-Pop-099939 Populus trichocarpa 57.97 0.00e+00 1606.00
IUUC-Pca-100616 Procavia capensis 40.00 3.00e-25 110.00
IUUC-Ppe-102063 Prunus persica 60.01 0.00e+00 1660.00
IUUC-Rno-104955 Rattus norvegicus 37.62 1.00e-64 241.00
IUUC-Sha-107589 Sarcophilus harrisii 37.86 1.00e-65 245.00
IUUC-Sar-112949 Sorex araneus 37.86 6.00e-66 246.00
IUUC-Ssc-116123 Sus scrofa 37.86 3.00e-66 246.00
IUUC-Tgu-117468 Taeniopygia guttata 37.14 6.00e-64 239.00
IUUC-Tru-117804 Takifugu rubripes 35.70 2.00e-59 224.00
IUUC-Tsy-118801 Tarsius syrichta 34.47 7.00e-54 205.00
IUUC-Tni-120578 Tetraodon nigroviridis 36.05 1.00e-62 235.00
IUUC-Tur-126857 Triticum urartu 49.35 0.00e+00 674.00
IUUC-Tbe-128066 Tupaia belangeri 44.31 3.00e-35 144.00
IUUC-Ttr-128293 Tursiops truncatus 37.62 6.00e-65 242.00
IUUC-Vpa-130272 Vicugna pacos 32.50 2.00e-24 108.00
IUUC-Vvi-131322 Vitis vinifera 57.66 0.00e+00 1667.00
IUUC-Xtr-132357 Xenopus tropicalis 37.59 9.00e-65 242.00
Created Date 25-Jun-2017

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