iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-089113

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03002777

Gene Name

AMBRA1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000002355.2	ENSOGAT00000002360.2	ENSOGAP00000002106.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-08	32.5	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTisGLIASGCLDGEVRIWDLH 126
           6777779*****76779***************97 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MKVVSEKNAV RILWGRERGT RAMGAQRLLQ ELVEDKTRWM KWEGKRVELP DSPRSTFLLA 60
FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTTG TTTCAGAGAA GAATGCTGTC CGGATACTCT GGGGGCGAGA ACGGGGCACT 60
CGGGCCATGG GAGCTCAGCG GCTTCTGCAG GAACTAGTGG AAGATAAAAC CCGGTGGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	95.51	0.00e+00	1752.00
IUUC-Atr-002557	Amborella trichopoda	33.89	2.00e-30	128.00
IUUC-Apl-004186	Anas platyrhynchos	80.61	0.00e+00	1909.00
IUUC-Aca-004419	Anolis carolinensis	76.25	0.00e+00	1796.00
IUUC-Aly-005774	Arabidopsis lyrata	41.10	2.00e-26	114.00
IUUC-Ath-007656	Arabidopsis thaliana	41.78	5.00e-27	116.00
IUUC-Ame-011354	Astyanax mexicanus	57.04	0.00e+00	1253.00
IUUC-Bta-012455	Bos taurus	92.66	0.00e+00	2184.00
IUUC-Bdi-014580	Brachypodium distachyon	37.50	8.00e-28	119.00
IUUC-Bol-016094	Brassica oleracea	38.92	1.00e-27	118.00
IUUC-Bra-017308	Brassica rapa	38.64	1.00e-28	121.00
IUUC-Cja-019073	Callithrix jacchus	96.17	2.00e-164	572.00
IUUC-Cfa-020994	Canis familiaris	93.76	0.00e+00	1528.00
IUUC-Cpo-022101	Cavia porcellus	93.08	0.00e+00	2153.00
IUUC-Csa-023273	Chlorocebus sabaeus	96.35	0.00e+00	1607.00
IUUC-Cin-025567	Ciona intestinalis	52.13	3.00e-51	196.00
IUUC-Csv-026005	Ciona savignyi	49.23	9.00e-50	189.00
IUUC-Dre-028282	Danio rerio	56.83	0.00e+00	1242.00
IUUC-Dno-029948	Dasypus novemcinctus	94.30	0.00e+00	2178.00
IUUC-Dor-030568	Dipodomys ordii	93.98	0.00e+00	1206.00
IUUC-Ete-032864	Echinops telfairi	91.67	0.00e+00	1131.00
IUUC-Eca-034392	Equus caballus	96.45	0.00e+00	1639.00
IUUC-Eeu-034440	Erinaceus europaeus	84.83	0.00e+00	1188.00
IUUC-Fca-035359	Felis catus	92.49	0.00e+00	2134.00
IUUC-Fal-037483	Ficedula albicollis	81.27	0.00e+00	1951.00
IUUC-Gmo-039343	Gadus morhua	75.54	0.00e+00	781.00
IUUC-Gga-040787	Gallus gallus	80.75	0.00e+00	1191.00
IUUC-Gac-041321	Gasterosteus aculeatus	61.03	0.00e+00	1321.00
IUUC-Gma-044022	Glycine max	33.82	3.00e-28	120.00
IUUC-Ggo-044775	Gorilla gorilla	95.81	0.00e+00	1072.00
IUUC-Hsa-045708	Homo sapiens	95.54	0.00e+00	2227.00
IUUC-Hvu-047536	Hordeum vulgare	34.59	1.00e-27	118.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	94.51	0.00e+00	1203.00
IUUC-Lch-050255	Latimeria chalumnae	68.95	0.00e+00	1370.00
IUUC-Lpe-050684	Leersia perrieri	35.98	8.00e-30	125.00
IUUC-Loc-052881	Lepisosteus oculatus	66.48	0.00e+00	1461.00
IUUC-Laf-053342	Loxodonta africana	97.63	0.00e+00	835.00
IUUC-Mcc-055848	Macaca mulatta	93.53	0.00e+00	2205.00
IUUC-Meu-056320	Macropus eugenii	81.97	0.00e+00	1040.00
IUUC-Mtr-058484	Medicago truncatula	35.75	3.00e-28	120.00
IUUC-Mga-059401	Meleagris gallopavo	83.90	0.00e+00	1627.00
IUUC-Mmr-061037	Microcebus murinus	94.62	0.00e+00	2166.00
IUUC-Mdo-062484	Monodelphis domestica	73.79	0.00e+00	1654.00
IUUC-Mmu-064090	Mus musculus	93.46	0.00e+00	2170.00
IUUC-Mac-065675	Musa acuminata	35.79	8.00e-28	119.00
IUUC-Mpu-066165	Mustela putorius furo	94.99	0.00e+00	1537.00
IUUC-Mlu-068038	Myotis lucifugus	93.63	0.00e+00	2264.00
IUUC-Nle-069361	Nomascus leucogenys	96.21	0.00e+00	1908.00
IUUC-Opr-070360	Ochotona princeps	93.83	0.00e+00	886.00
IUUC-Ont-071277	Oreochromis niloticus	61.95	0.00e+00	1327.00
IUUC-Oan-073623	Ornithorhynchus anatinus	83.05	0.00e+00	1035.00
IUUC-Ocu-074600	Oryctolagus cuniculus	97.08	0.00e+00	1412.00
IUUC-Oba-075024	Oryza barthii	37.13	3.00e-29	123.00
IUUC-Obr-076273	Oryza brachyantha	36.90	1.00e-28	122.00
IUUC-Ogl-077411	Oryza glaberrima	32.86	3.00e-29	123.00
IUUC-Ogu-078025	Oryza glumaepatula	37.13	4.00e-29	124.00
IUUC-Oni-082463	Oryza nivara	37.13	3.00e-29	124.00
IUUC-Opu-084041	Oryza punctata	37.13	6.00e-29	122.00
IUUC-Oru-085075	Oryza rufipogon	37.13	8.00e-29	122.00
IUUC-Osa-085781	Oryza sativa	32.86	3.00e-29	123.00
IUUC-Ola-086729	Oryzias latipes	62.08	0.00e+00	1355.00
IUUC-Olu-087735	Ostreococcus lucimarinus	40.32	6.00e-24	105.00
IUUC-Oar-090171	Ovis aries	94.12	0.00e+00	2033.00
IUUC-Ptr-090970	Pan troglodytes	95.61	0.00e+00	2229.00
IUUC-Pan-092778	Papio anubis	96.24	0.00e+00	1629.00
IUUC-Psi-093571	Pelodiscus sinensis	80.68	0.00e+00	1926.00
IUUC-Pma-094563	Petromyzon marinus	65.98	1.00e-92	332.00
IUUC-Ppa-095832	Physcomitrella patens	34.39	4.00e-28	120.00
IUUC-Pfo-097365	Poecilia formosa	58.93	0.00e+00	1231.00
IUUC-Pab-098647	Pongo abelii	94.72	0.00e+00	1200.00
IUUC-Pop-099742	Populus trichocarpa	36.70	2.00e-27	117.00
IUUC-Pca-101035	Procavia capensis	90.14	0.00e+00	1140.00
IUUC-Ppe-101411	Prunus persica	35.35	2.00e-28	120.00
IUUC-Pva-103187	Pteropus vampyrus	94.65	0.00e+00	886.00
IUUC-Rno-105701	Rattus norvegicus	93.46	0.00e+00	2152.00
IUUC-Sha-107612	Sarcophilus harrisii	84.48	0.00e+00	1960.00
IUUC-Smo-109107	Selaginella moellendorffii	42.74	9.00e-25	108.00
IUUC-Sit-110786	Setaria italica	37.50	8.00e-30	125.00
IUUC-Sly-110859	Solanum lycopersicum	34.43	1.00e-29	125.00
IUUC-Stu-112031	Solanum tuberosum	34.91	8.00e-30	125.00
IUUC-Sar-113242	Sorex araneus	91.12	0.00e+00	1030.00
IUUC-Ssc-116094	Sus scrofa	94.85	0.00e+00	2212.00
IUUC-Tru-118308	Takifugu rubripes	60.48	0.00e+00	1280.00
IUUC-Tsy-119552	Tarsius syrichta	92.08	0.00e+00	1190.00
IUUC-Tca-121616	Theobroma cacao	36.14	3.00e-29	123.00
IUUC-Tae-124768	Triticum aestivum	35.14	3.00e-28	120.00
IUUC-Tur-126480	Triticum urartu	35.14	2.00e-28	120.00
IUUC-Tbe-127902	Tupaia belangeri	90.29	0.00e+00	918.00
IUUC-Ttr-129278	Tursiops truncatus	92.08	0.00e+00	1156.00
IUUC-Vpa-130741	Vicugna pacos	89.98	0.00e+00	844.00
IUUC-Vvi-131437	Vitis vinifera	38.17	2.00e-27	118.00
IUUC-Xtr-132247	Xenopus tropicalis	63.51	0.00e+00	1268.00
IUUC-Xma-134277	Xiphophorus maculatus	59.92	0.00e+00	1348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence