iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-10	39.1	184	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgt.ikvWDlrtgvllk 37
           H++  +c+a+  ++t+++++s  gt i+++D+++g+l++
   Q: 184  HEGVLSCIALnlQGTRIATASEKGTlIRIFDTSSGHLIQ 222
           9999******9777********************99887 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNLLPCNPHG NGLLYAGFNQ DHGCFACGME NGFRVYNTDP LKEKEKQEFL EGGVGHVEML 60
FRCNYLALVG GGKKPKYPPN KVMIWDDLKK KTVIEIEFST EVKAVKLRRD RIVVVLDSMI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACACGCAC TACGCAAGCC CCTAGGACCC TCGCTTCCGG CCGCGGCGGC CCTAGCGCCG 60
CGCGACCGGA TAGATCGTCT GGTTTTGAGC GGTATGCGGT GCTGAGGAGC GACGGACCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

rno:360682

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000966	Aegilops tauschii	43.96	1.00e-76	280.00
IUUC-Aml-001504	Ailuropoda melanoleuca	98.84	0.00e+00	652.00
IUUC-Atr-002710	Amborella trichopoda	43.24	4.00e-72	265.00
IUUC-Apl-003741	Anas platyrhynchos	97.52	1.00e-172	598.00
IUUC-Aca-004629	Anolis carolinensis	95.93	0.00e+00	637.00
IUUC-Aly-006440	Arabidopsis lyrata	43.07	3.00e-64	239.00
IUUC-Ath-006629	Arabidopsis thaliana	44.21	1.00e-65	243.00
IUUC-Ame-011233	Astyanax mexicanus	95.35	0.00e+00	634.00
IUUC-Bta-012842	Bos taurus	98.55	0.00e+00	652.00
IUUC-Bdi-014739	Brachypodium distachyon	45.09	2.00e-77	283.00
IUUC-Bol-015119	Brassica oleracea	44.41	7.00e-67	247.00
IUUC-Bra-017319	Brassica rapa	44.88	7.00e-67	247.00
IUUC-Cja-018855	Callithrix jacchus	98.73	4.00e-171	593.00
IUUC-Cfa-020539	Canis familiaris	98.73	2.00e-170	591.00
IUUC-Cpo-021981	Cavia porcellus	99.13	0.00e+00	655.00
IUUC-Csa-023140	Chlorocebus sabaeus	99.13	0.00e+00	655.00
IUUC-Cin-025655	Ciona intestinalis	63.66	6.00e-116	410.00
IUUC-Csv-025977	Ciona savignyi	63.35	3.00e-122	431.00
IUUC-Dre-028091	Danio rerio	95.35	0.00e+00	633.00
IUUC-Dno-029987	Dasypus novemcinctus	97.97	0.00e+00	650.00
IUUC-Dme-031881	Drosophila melanogaster	67.93	2.00e-134	472.00
IUUC-Ete-032771	Echinops telfairi	85.50	6.00e-120	423.00
IUUC-Eca-033323	Equus caballus	99.07	2.00e-175	607.00
IUUC-Eeu-034479	Erinaceus europaeus	97.42	1.00e-124	438.00
IUUC-Fca-035675	Felis catus	96.96	2.00e-175	607.00
IUUC-Fal-037218	Ficedula albicollis	96.51	0.00e+00	639.00
IUUC-Fso-038422	Fusarium solani	36.16	2.00e-48	186.00
IUUC-Ggr-039909	Gaeumannomyces graminis	37.80	2.00e-52	199.00
IUUC-Gga-040977	Gallus gallus	96.80	0.00e+00	639.00
IUUC-Gac-042096	Gasterosteus aculeatus	94.77	0.00e+00	654.00
IUUC-Gma-043922	Glycine max	46.55	1.00e-74	273.00
IUUC-Ggo-045466	Gorilla gorilla	79.65	3.00e-145	507.00
IUUC-Hsa-046532	Homo sapiens	99.13	0.00e+00	655.00
IUUC-Hvu-047851	Hordeum vulgare	43.96	7.00e-77	281.00
IUUC-Itr-048277	Ictidomys tridecemlineatus	98.84	0.00e+00	655.00
IUUC-Lch-049800	Latimeria chalumnae	95.06	0.00e+00	634.00
IUUC-Lpe-051205	Leersia perrieri	46.40	6.00e-77	281.00
IUUC-Loc-052379	Lepisosteus oculatus	96.58	2.00e-171	594.00
IUUC-Laf-054084	Loxodonta africana	92.31	5.00e-169	586.00
IUUC-Mcc-055304	Macaca mulatta	99.05	2.00e-171	594.00
IUUC-Meu-056020	Macropus eugenii	87.70	5.00e-141	493.00
IUUC-Mpo-057416	Magnaporthe poae	39.37	4.00e-54	205.00
IUUC-Mtr-058609	Medicago truncatula	45.43	5.00e-65	241.00
IUUC-Mla-058885	Melampsora laricipopulina	37.50	1.00e-37	149.00
IUUC-Mga-060051	Meleagris gallopavo	95.48	2.00e-174	604.00
IUUC-Mmr-061076	Microcebus murinus	91.33	2.00e-169	587.00
IUUC-Mdo-062465	Monodelphis domestica	97.97	0.00e+00	647.00
IUUC-Mmu-063289	Mus musculus	100.00	0.00e+00	660.00
IUUC-Mac-064838	Musa acuminata	42.70	4.00e-74	271.00
IUUC-Mpu-066052	Mustela putorius furo	97.83	4.00e-174	603.00
IUUC-Mlu-067972	Myotis lucifugus	98.84	0.00e+00	654.00
IUUC-Nfi-068596	Neosartorya fischeri	36.34	2.00e-53	202.00
IUUC-Nle-069047	Nomascus leucogenys	100.00	2.00e-176	611.00
IUUC-Ont-071875	Oreochromis niloticus	95.35	0.00e+00	658.00
IUUC-Ocu-074736	Oryctolagus cuniculus	90.27	6.00e-160	556.00
IUUC-Oba-075827	Oryza barthii	45.77	3.00e-77	282.00
IUUC-Obr-076476	Oryza brachyantha	45.48	7.00e-77	281.00
IUUC-Ogl-077630	Oryza glaberrima	45.77	3.00e-77	282.00
IUUC-Ogu-078126	Oryza glumaepatula	46.06	1.00e-77	283.00
IUUC-Oin-080115	Oryza indica	45.77	3.00e-77	282.00
IUUC-Olo-080657	Oryza longistaminata	45.91	6.00e-77	282.00
IUUC-Ome-081702	Oryza meridionalis	45.72	4.00e-75	275.00
IUUC-Oni-082884	Oryza nivara	46.51	4.00e-77	282.00
IUUC-Opu-083460	Oryza punctata	46.51	1.00e-76	281.00
IUUC-Oru-084193	Oryza rufipogon	45.77	3.00e-77	282.00
IUUC-Osa-085948	Oryza sativa	45.77	3.00e-77	282.00
IUUC-Ola-086628	Oryzias latipes	94.19	0.00e+00	652.00
IUUC-Olu-087808	Ostreococcus lucimarinus	41.57	6.00e-72	264.00
IUUC-Oga-088642	Otolemur garnettii	99.13	0.00e+00	655.00
IUUC-Oar-089538	Ovis aries	93.62	4.00e-175	607.00
IUUC-Ptr-091326	Pan troglodytes	99.13	0.00e+00	655.00
IUUC-Pan-091795	Papio anubis	99.13	0.00e+00	655.00
IUUC-Psi-093258	Pelodiscus sinensis	97.20	8.00e-173	599.00
IUUC-Pno-094851	Phaeosphaeria nodorum	34.08	2.00e-44	173.00
IUUC-Ppa-095480	Physcomitrella patens	43.42	1.00e-69	257.00
IUUC-Pfo-096099	Poecilia formosa	95.06	0.00e+00	656.00
IUUC-Pab-098681	Pongo abelii	99.13	0.00e+00	655.00
IUUC-Pop-099760	Populus trichocarpa	45.54	2.00e-76	280.00
IUUC-Ppe-101963	Prunus persica	46.08	5.00e-65	241.00
IUUC-Pva-103006	Pteropus vampyrus	98.44	8.00e-174	602.00
IUUC-Pgr-103258	Puccinia graminis	36.08	1.00e-40	161.00
IUUC-Ptt-103915	Puccinia triticina	34.63	4.00e-38	152.00
IUUC-Pte-104115	Pyrenophora teres	35.05	4.00e-46	178.00
IUUC-Sce-106327	Saccharomyces cerevisiae	29.58	2.00e-35	143.00
IUUC-Sha-107573	Sarcophilus harrisii	97.67	0.00e+00	647.00
IUUC-Sja-107791	Schizosaccharomyces japonicus	34.78	2.00e-44	172.00
IUUC-Spo-108254	Schizosaccharomyces pombe	34.16	5.00e-41	161.00
IUUC-Smo-108755	Selaginella moellendorffii	42.93	4.00e-80	291.00
IUUC-Sit-110095	Setaria italica	45.09	6.00e-77	281.00
IUUC-Sly-111030	Solanum lycopersicum	40.77	2.00e-69	256.00
IUUC-Stu-111954	Solanum tuberosum	44.12	1.00e-66	247.00
IUUC-Sar-113276	Sorex araneus	88.05	4.00e-109	387.00
IUUC-Sbi-114020	Sorghum bicolor	44.51	1.00e-76	280.00
IUUC-Ssc-116163	Sus scrofa	98.26	0.00e+00	653.00
IUUC-Tgu-116488	Taeniopygia guttata	96.89	4.00e-171	593.00
IUUC-Tru-118329	Takifugu rubripes	94.48	0.00e+00	683.00
IUUC-Tni-119729	Tetraodon nigroviridis	86.82	0.00e+00	627.00
IUUC-Tca-121459	Theobroma cacao	45.32	4.00e-60	225.00
IUUC-Tre-122255	Trichoderma reesei	37.07	6.00e-51	194.00
IUUC-Tvi-122643	Trichoderma virens	39.00	3.00e-55	208.00
IUUC-Tae-125776	Triticum aestivum	43.96	8.00e-77	280.00
IUUC-Tur-126757	Triticum urartu	43.68	8.00e-77	280.00
IUUC-Ttr-128940	Tursiops truncatus	98.65	4.00e-158	550.00
IUUC-Vda-129980	Verticillium dahliae	31.11	1.00e-42	167.00
IUUC-Vvi-131053	Vitis vinifera	46.39	4.00e-75	275.00
IUUC-Xtr-131806	Xenopus tropicalis	96.51	0.00e+00	641.00
IUUC-Xma-134275	Xiphophorus maculatus	95.06	0.00e+00	656.00
IUUC-Yli-134566	Yarrowia lipolytica	35.71	2.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence