iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071675

Ensembl Protein ID

ENSONIP00000013281.1

UniProt Accession

I3JWN6; I3JWN6_ORENI

Genbank Protein ID

ENSONIP00000013281

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01003241

Gene Name

nedd1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000010563.1	ENSONIT00000013291.1	ENSONIP00000013281.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	67.0	84	112
UBD/Beta-Prp	1.60e-49	169.1	80	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++ s+  +lvsG+ D+ +++WDl+t +l 
   Q: 84   CLsSSsQFLVSGGLDHCVHIWDLKTKRLH 112
           55534489***************998875 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlsl 100
            t v+ s ++++l++g+ d+++ +wd++t+ l rsl++h++evt+v+f+ ++++ ++gs+ + + + +l t+   + +  g ++ + +l
   Q: 80   QTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKEEVTCVSFNANDSYVASGSTSGDLVLHSLTTNLSSRPFGhGSNQPIHDL 168
           45678888999999999999999999999999999999999999999999999999999999999999998877777755999999999 PP
   S: 101  sfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           ++s  +++ l s s+  t+ +wd +t+++l+ ++  h++  ++++++p++  l+vs +lD+++  +d +++ +lr  +   +++ + ++
   Q: 169  RLSTvKRSLLGSVSDSGTVVLWDSNTQKELHMFDGAHKAPGSGLAFSPTSdLLVVSVGLDKKIVCYDTASKIVLRSIRV--DSPLTAVD 255
           9999666999999999999999999999999888888888999999999988999999999999999999999999985..99999999 PP
   S: 188  fdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnder 236
           f+ +g+ lv gs+ g++  +dl+ ++   r+  +h++ v+++rf +n+ r
   Q: 256  FTLDGTGLVVGSTHGKIYQYDLRnSSAPTRITVAHKTSVTCLRFQSNTSR 305
           99999999999999999999999666679999999999999999987765 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MEEVTRLVST GDCVKIWDAV SMAPLEQFNP HSTSHPVAQA CWSSNNQYLV SASSSGDKLV 60
VSSLKSTPVP VVELADGKKQ TRVCLSSSSQ FLVSGGLDHC VHIWDLKTKR LHRSLKDHKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGG TGACACGGCT GGTGTCGACC GGAGACTGCG TGAAGATCTG GGATGCGGTT 60
TCCATGGCGC CGCTGGAGCA GTTTAACCCA CACAGCACAA GCCACCCTGT CGCTCAGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0071539--P:protein localization to centrosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	26.80	8.00e-16	79.70
IUUC-Aml-002397	Ailuropoda melanoleuca	44.41	4.00e-141	495.00
IUUC-Atr-002464	Amborella trichopoda	32.89	2.00e-35	144.00
IUUC-Apl-003870	Anas platyrhynchos	44.35	2.00e-136	479.00
IUUC-Aca-004925	Anolis carolinensis	42.65	2.00e-135	476.00
IUUC-Aly-005931	Arabidopsis lyrata	31.33	2.00e-33	137.00
IUUC-Ath-006681	Arabidopsis thaliana	29.20	2.00e-34	140.00
IUUC-Ame-010906	Astyanax mexicanus	57.40	0.00e+00	665.00
IUUC-Bta-013389	Bos taurus	44.48	2.00e-139	489.00
IUUC-Bdi-014340	Brachypodium distachyon	31.29	3.00e-35	144.00
IUUC-Bol-016282	Brassica oleracea	33.55	5.00e-34	139.00
IUUC-Bra-017178	Brassica rapa	34.19	9.00e-35	142.00
IUUC-Cja-019541	Callithrix jacchus	45.49	4.00e-147	515.00
IUUC-Cfa-021218	Canis familiaris	43.82	4.00e-139	489.00
IUUC-Cpo-021697	Cavia porcellus	43.71	1.00e-130	460.00
IUUC-Csa-023620	Chlorocebus sabaeus	45.15	2.00e-144	506.00
IUUC-Cho-025105	Choloepus hoffmanni	40.07	2.00e-97	350.00
IUUC-Cin-025293	Ciona intestinalis	41.00	6.00e-55	209.00
IUUC-Csv-026234	Ciona savignyi	35.74	2.00e-43	169.00
IUUC-Dre-028251	Danio rerio	58.78	0.00e+00	644.00
IUUC-Dno-029281	Dasypus novemcinctus	44.77	2.00e-114	406.00
IUUC-Dor-031020	Dipodomys ordii	62.91	2.00e-55	211.00
IUUC-Ete-033113	Echinops telfairi	47.22	2.00e-91	330.00
IUUC-Eca-034230	Equus caballus	44.35	3.00e-139	489.00
IUUC-Eeu-034671	Erinaceus europaeus	59.68	7.00e-88	318.00
IUUC-Fca-035775	Felis catus	45.11	2.00e-144	506.00
IUUC-Fal-037557	Ficedula albicollis	42.98	8.00e-126	444.00
IUUC-Gmo-038586	Gadus morhua	54.57	2.00e-168	585.00
IUUC-Gga-040153	Gallus gallus	43.87	1.00e-138	487.00
IUUC-Gac-041385	Gasterosteus aculeatus	71.69	0.00e+00	815.00
IUUC-Gma-042844	Glycine max	33.44	1.00e-38	154.00
IUUC-Ggo-044576	Gorilla gorilla	45.08	1.00e-145	510.00
IUUC-Hsa-046198	Homo sapiens	44.93	9.00e-146	510.00
IUUC-Hvu-047794	Hordeum vulgare	31.41	7.00e-16	76.60
IUUC-Lch-050561	Latimeria chalumnae	36.26	6.00e-100	358.00
IUUC-Lpe-051469	Leersia perrieri	31.68	6.00e-34	139.00
IUUC-Loc-052816	Lepisosteus oculatus	48.66	1.00e-144	506.00
IUUC-Laf-053880	Loxodonta africana	43.54	4.00e-132	465.00
IUUC-Mcc-054977	Macaca mulatta	44.88	4.00e-145	508.00
IUUC-Meu-056141	Macropus eugenii	53.00	1.00e-92	333.00
IUUC-Mtr-058441	Medicago truncatula	33.44	6.00e-37	149.00
IUUC-Mga-060141	Meleagris gallopavo	44.23	6.00e-136	478.00
IUUC-Mmr-061201	Microcebus murinus	45.45	1.00e-145	510.00
IUUC-Mdo-061855	Monodelphis domestica	42.84	2.00e-135	476.00
IUUC-Mmu-064342	Mus musculus	45.25	1.00e-141	497.00
IUUC-Mac-065368	Musa acuminata	30.87	4.00e-33	137.00
IUUC-Mpu-066191	Mustela putorius furo	43.82	4.00e-140	492.00
IUUC-Mlu-067310	Myotis lucifugus	43.24	4.00e-137	482.00
IUUC-Nle-069990	Nomascus leucogenys	44.93	7.00e-146	511.00
IUUC-Opr-070336	Ochotona princeps	43.20	2.00e-127	449.00
IUUC-Oan-072772	Ornithorhynchus anatinus	43.27	1.00e-111	397.00
IUUC-Ocu-074095	Oryctolagus cuniculus	46.59	1.00e-147	516.00
IUUC-Oba-075327	Oryza barthii	32.01	4.00e-35	143.00
IUUC-Obr-076119	Oryza brachyantha	32.34	3.00e-35	144.00
IUUC-Ogl-077820	Oryza glaberrima	32.34	2.00e-35	144.00
IUUC-Ogu-078679	Oryza glumaepatula	32.01	8.00e-35	142.00
IUUC-Oin-079891	Oryza indica	32.01	3.00e-35	144.00
IUUC-Olo-080414	Oryza longistaminata	32.32	3.00e-32	134.00
IUUC-Ome-081888	Oryza meridionalis	32.34	3.00e-35	144.00
IUUC-Oni-082417	Oryza nivara	32.01	5.00e-35	143.00
IUUC-Opu-083393	Oryza punctata	32.01	4.00e-35	143.00
IUUC-Oru-084698	Oryza rufipogon	32.01	3.00e-35	144.00
IUUC-Osa-086121	Oryza sativa	32.01	5.00e-35	143.00
IUUC-Ola-086806	Oryzias latipes	68.69	0.00e+00	822.00
IUUC-Olu-087591	Ostreococcus lucimarinus	27.11	6.00e-14	72.40
IUUC-Oga-088622	Otolemur garnettii	46.72	3.00e-149	522.00
IUUC-Oar-090391	Ovis aries	42.45	1.00e-115	410.00
IUUC-Ptr-091036	Pan troglodytes	45.10	1.00e-145	510.00
IUUC-Pan-092576	Papio anubis	44.74	5.00e-145	508.00
IUUC-Psi-093450	Pelodiscus sinensis	44.23	5.00e-140	491.00
IUUC-Pma-094101	Petromyzon marinus	51.66	8.00e-88	317.00
IUUC-Ppa-095262	Physcomitrella patens	33.44	9.00e-38	152.00
IUUC-Pfo-097142	Poecilia formosa	74.45	0.00e+00	900.00
IUUC-Pab-097829	Pongo abelii	45.08	4.00e-147	515.00
IUUC-Pop-099687	Populus trichocarpa	33.01	9.00e-37	149.00
IUUC-Pca-100217	Procavia capensis	43.58	1.00e-94	340.00
IUUC-Ppe-101502	Prunus persica	31.82	1.00e-35	145.00
IUUC-Pva-102736	Pteropus vampyrus	45.21	1.00e-143	503.00
IUUC-Rno-104977	Rattus norvegicus	43.93	2.00e-136	479.00
IUUC-Sha-107003	Sarcophilus harrisii	44.13	9.00e-137	480.00
IUUC-Smo-109002	Selaginella moellendorffii	31.58	1.00e-34	141.00
IUUC-Sit-109796	Setaria italica	31.63	3.00e-34	140.00
IUUC-Sly-110941	Solanum lycopersicum	31.15	4.00e-35	143.00
IUUC-Stu-112314	Solanum tuberosum	31.48	2.00e-35	144.00
IUUC-Sar-112926	Sorex araneus	39.70	3.00e-117	416.00
IUUC-Sbi-113822	Sorghum bicolor	34.09	9.00e-23	102.00
IUUC-Ssc-116242	Sus scrofa	60.07	4.00e-111	394.00
IUUC-Tgu-116765	Taeniopygia guttata	44.95	4.00e-130	458.00
IUUC-Tru-117738	Takifugu rubripes	70.71	0.00e+00	912.00
IUUC-Tsy-118856	Tarsius syrichta	42.83	4.00e-121	428.00
IUUC-Tni-120871	Tetraodon nigroviridis	68.67	0.00e+00	877.00
IUUC-Tca-120965	Theobroma cacao	30.90	1.00e-34	142.00
IUUC-Tae-123957	Triticum aestivum	32.67	3.00e-37	150.00
IUUC-Tur-126840	Triticum urartu	32.67	3.00e-37	150.00
IUUC-Ttr-128551	Tursiops truncatus	43.97	2.00e-134	472.00
IUUC-Vpa-130324	Vicugna pacos	44.74	7.00e-143	501.00
IUUC-Vvi-131699	Vitis vinifera	31.49	5.00e-36	146.00
IUUC-Xtr-131956	Xenopus tropicalis	48.32	7.00e-151	527.00
IUUC-Xma-132982	Xiphophorus maculatus	78.40	0.00e+00	914.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence