iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048798

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01019964

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000007867.2	ENSSTOT00000007876.2	ENSSTOP00000007048.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-50	166.6	229	267
UBD/Beta-Prp	1.00e-69	235.0	12	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+++af +d + l+s+s+ gtikvWD+ tg++l 
   Q: 229  GHVAWVNSIAFsPDeGQLASASYSGTIKVWDYNTGKCLE 267
           8***********999**********************86 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk 91
           +t++g h + ++c +fspd++ l+t+s+dg +  w++++g+ll++l gh+++v+ ++fspdg +++++s+Drti++wdls  +c+ +lk
   Q: 12   VTFFGRHRGEVNCSAFSPDGQTLLTASEDGYLYGWETKSGQLLWRLGGHTGPVKFCCFSPDGYLFASSSSDRTIRLWDLSRAECLWVLK 100
           589999*********************************************************************************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           gh++sv ++sfsp++  l+sG++d+ +++w++++g +l+  l+gh++++++  ++p++n+l++Gs D+tvr+Wdl+ g+
   Q: 101  GHQRSVETISFSPDSRQLASGGWDKQVMLWEVQSGHKLR-HLEGHHDSIQSSDFSPNANCLATGSWDSTVRIWDLRVGT 178
           ***************************************.***********************************9876 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MNSRAPLSVG RVTFFGRHRG EVNCSAFSPD GQTLLTASED GYLYGWETKS GQLLWRLGGH 60
TGPVKFCCFS PDGYLFASSS SDRTIRLWDL SRAECLWVLK GHQRSVETIS FSPDSRQLAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATAGCA GGGCTCCACT TTCCGTGGGG AGAGTGACAT TCTTTGGCCG GCATCGCGGG 60
GAGGTGAGGC CCAATGGGCT TTGCCCAGGA TCTAGGCTCC TCGCTTGGGA GTCAAGTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	77.63	1.00e-128	451.00
IUUC-Ame-010858	Astyanax mexicanus	47.93	8.00e-73	266.00
IUUC-Bta-012352	Bos taurus	76.61	2.00e-128	451.00
IUUC-Cja-019585	Callithrix jacchus	78.20	6.00e-130	456.00
IUUC-Cfa-020062	Canis familiaris	73.98	6.00e-107	380.00
IUUC-Csa-023528	Chlorocebus sabaeus	81.02	5.00e-134	469.00
IUUC-Cin-025426	Ciona intestinalis	36.42	2.00e-49	189.00
IUUC-Dre-027740	Danio rerio	51.04	6.00e-49	186.00
IUUC-Dno-030012	Dasypus novemcinctus	66.47	5.00e-118	416.00
IUUC-Dor-030536	Dipodomys ordii	63.54	1.00e-95	342.00
IUUC-Ete-032871	Echinops telfairi	71.43	2.00e-87	314.00
IUUC-Eca-033729	Equus caballus	78.64	3.00e-131	460.00
IUUC-Eeu-034740	Erinaceus europaeus	75.25	3.00e-124	437.00
IUUC-Fca-036514	Felis catus	77.29	4.00e-130	457.00
IUUC-Ggo-044793	Gorilla gorilla	78.31	7.00e-128	449.00
IUUC-Hsa-046414	Homo sapiens	79.39	4.00e-129	453.00
IUUC-Lch-049905	Latimeria chalumnae	47.95	2.00e-77	281.00
IUUC-Loc-052101	Lepisosteus oculatus	49.29	6.00e-76	276.00
IUUC-Laf-053443	Loxodonta africana	74.07	7.00e-120	422.00
IUUC-Mcc-055346	Macaca mulatta	80.34	4.00e-133	467.00
IUUC-Meu-056531	Macropus eugenii	58.01	1.00e-68	252.00
IUUC-Mmr-061721	Microcebus murinus	80.68	6.00e-133	466.00
IUUC-Mdo-062379	Monodelphis domestica	58.97	2.00e-95	342.00
IUUC-Mmu-064175	Mus musculus	73.31	4.00e-121	427.00
IUUC-Mpu-066361	Mustela putorius furo	78.64	2.00e-129	454.00
IUUC-Mlu-067300	Myotis lucifugus	59.33	4.00e-84	303.00
IUUC-Nle-070150	Nomascus leucogenys	80.07	8.00e-131	459.00
IUUC-Opr-071060	Ochotona princeps	67.80	1.00e-97	349.00
IUUC-Ocu-074101	Oryctolagus cuniculus	76.61	3.00e-124	437.00
IUUC-Oga-088479	Otolemur garnettii	78.64	9.00e-133	465.00
IUUC-Oar-089608	Ovis aries	75.85	1.00e-127	449.00
IUUC-Ptr-091521	Pan troglodytes	80.68	1.00e-132	465.00
IUUC-Pan-092092	Papio anubis	80.34	2.00e-133	467.00
IUUC-Pab-098454	Pongo abelii	80.34	6.00e-133	466.00
IUUC-Pca-100981	Procavia capensis	77.97	1.00e-128	452.00
IUUC-Pva-102491	Pteropus vampyrus	77.97	1.00e-129	455.00
IUUC-Rno-105417	Rattus norvegicus	72.89	1.00e-110	391.00
IUUC-Sha-107649	Sarcophilus harrisii	59.86	1.00e-96	345.00
IUUC-Sar-113110	Sorex araneus	61.90	7.00e-77	280.00
IUUC-Ssc-116197	Sus scrofa	77.97	5.00e-130	456.00
IUUC-Tbe-127734	Tupaia belangeri	75.00	2.00e-65	241.00
IUUC-Ttr-128709	Tursiops truncatus	74.92	3.00e-122	430.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence