iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016277

Ensembl Protein ID

Bo9g020290.1

UniProt Accession

A0A0D3E2H9; A0A0D3E2H9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g020290	Bo9g020290.1	Bo9g020290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-51	169.3	443	479
UBD/Beta-Prp	3.80e-81	274.0	317	609

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+c+++ ++ tll+s+sdD t k+W++++++ 
   Q: 443  GHQGEVNCVKWdPTgTLLASCSDDSTAKIWNIKQHNF 479
           8***********888****************988765 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           ++++ k+v t +++  +++llatgs dg  ++w +  g+l+++ls+h++++ ++k++++g++l+tgs Drt+ vwd+++ +  + ++ h+   l+++
   Q: 317  SNEKSKDVTT-LDWNGEGTLLATGSCDGQARIWTTN-GDLISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHTGPTLDVD 411
           4566677777.**********************765.5*********************************************************** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng...... 192
           +   + ++++ s d  i + ++ +   ++ +++gh+g vncv+++p+g ll+s+s+D+t ++W++k+ + +++l+  ht+ +y + ++++g      
   Q: 412  WRN-NVSFATSSTDTFIYLCKIGETRPVK-VFAGHQGEVNCVKWDPTGTLLASCSDDSTAKIWNIKQHNFVHDLRD-HTKEIYTIRWSPTGpgtnnp 505
           *99.8899********************9.*********************************************8.******************** PP
   S: 193  ...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsed 286
                l+s+s d+tvklwd + g+++ +lngh+d v+s++fspn+e+++sgs D+si iW l+ g+++kt++++    i   +++ ++n+l+++ +d
   Q: 506  nkqLTLASASFDSTVKLWDAELGKMICSLNGHRDAVYSLAFSPNGEYIASGSVDKSIHIWSLKEGKVVKTYTGEG--GIFEVCWNKEGNKLAACFAD 600
           *9999********************************************************************54..55556679999999999999 PP
   S: 287  skvniwklk 295
           ++v +++++
   Q: 601  NSVCVLDFR 609
           999999986 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSSLTSVEMN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL VKFVQKGLQY 60
MEMEANLTNG EMETEEDFSF FQPLDLISKD VKELQDMLRE RKRKDKEKEK DKSKENDREV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCAC TCACCTCCGT CGAGATGAAT TTTCTGGTTT TCCGTTATCT TCAGGAATCA 60
GGTAACGAAT CCTTTATCTC TCCTTTGTTC TTATTTATTT GATTGAAATT TGTATCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016575--P:histone deacetylation
GO:0009409--P:response to cold

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	69.01	1.00e-62	231.00
IUUC-Aml-001717	Ailuropoda melanoleuca	59.72	1.00e-122	433.00
IUUC-Atr-002514	Amborella trichopoda	72.87	2.00e-166	578.00
IUUC-Apl-003708	Anas platyrhynchos	59.72	2.00e-122	432.00
IUUC-Aca-004611	Anolis carolinensis	59.72	7.00e-123	433.00
IUUC-Aly-005622	Arabidopsis lyrata	88.42	0.00e+00	721.00
IUUC-Ath-007137	Arabidopsis thaliana	87.07	0.00e+00	707.00
IUUC-Ame-011601	Astyanax mexicanus	60.83	1.00e-124	439.00
IUUC-Bta-012418	Bos taurus	59.44	3.00e-130	458.00
IUUC-Bdi-014315	Brachypodium distachyon	70.13	5.00e-160	557.00
IUUC-Bra-016944	Brassica rapa	98.53	0.00e+00	821.00
IUUC-Cja-018832	Callithrix jacchus	60.00	2.00e-123	435.00
IUUC-Cfa-020029	Canis familiaris	60.00	3.00e-123	435.00
IUUC-Cpo-021682	Cavia porcellus	57.59	1.00e-130	459.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	57.18	8.00e-119	420.00
IUUC-Csa-024075	Chlorocebus sabaeus	60.00	3.00e-123	435.00
IUUC-Cin-025704	Ciona intestinalis	53.01	6.00e-130	457.00
IUUC-Csv-026257	Ciona savignyi	54.97	1.00e-125	443.00
IUUC-Cme-027258	Cyanidioschyzon merolae	42.76	9.00e-94	337.00
IUUC-Dre-027906	Danio rerio	60.00	1.00e-123	436.00
IUUC-Dno-029196	Dasypus novemcinctus	60.00	3.00e-123	435.00
IUUC-Dor-030732	Dipodomys ordii	59.60	5.00e-119	421.00
IUUC-Dme-031939	Drosophila melanogaster	55.88	3.00e-115	409.00
IUUC-Ete-033150	Echinops telfairi	59.15	2.00e-108	386.00
IUUC-Eca-033897	Equus caballus	56.70	4.00e-130	457.00
IUUC-Eeu-034952	Erinaceus europaeus	52.53	1.00e-101	363.00
IUUC-Fca-035734	Felis catus	60.00	2.00e-123	435.00
IUUC-Fal-037185	Ficedula albicollis	59.72	9.00e-123	433.00
IUUC-Gmo-038870	Gadus morhua	59.17	9.00e-128	449.00
IUUC-Gga-041161	Gallus gallus	59.72	1.00e-122	433.00
IUUC-Gac-041844	Gasterosteus aculeatus	59.72	2.00e-131	462.00
IUUC-Gma-043369	Glycine max	75.81	0.00e+00	647.00
IUUC-Ggo-044882	Gorilla gorilla	60.00	3.00e-123	435.00
IUUC-Hsa-046488	Homo sapiens	60.00	3.00e-123	435.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	60.00	2.00e-122	431.00
IUUC-Lch-050672	Latimeria chalumnae	60.00	8.00e-124	437.00
IUUC-Lpe-051084	Leersia perrieri	69.17	4.00e-159	554.00
IUUC-Loc-052030	Lepisosteus oculatus	60.00	2.00e-131	462.00
IUUC-Laf-054280	Loxodonta africana	59.72	4.00e-131	461.00
IUUC-Mcc-055203	Macaca mulatta	60.00	3.00e-123	434.00
IUUC-Meu-056563	Macropus eugenii	63.29	2.00e-84	305.00
IUUC-Mtr-058624	Medicago truncatula	69.39	9.00e-38	151.00
IUUC-Mga-059660	Meleagris gallopavo	59.72	1.00e-122	433.00
IUUC-Mvi-060557	Microbotryum violaceum	37.86	1.00e-71	264.00
IUUC-Mmr-060925	Microcebus murinus	60.00	1.00e-122	432.00
IUUC-Mdo-062078	Monodelphis domestica	59.72	8.00e-123	433.00
IUUC-Mmu-063603	Mus musculus	60.28	6.00e-124	437.00
IUUC-Mac-065508	Musa acuminata	52.76	3.00e-90	325.00
IUUC-Mpu-066741	Mustela putorius furo	60.00	3.00e-123	435.00
IUUC-Mlu-068152	Myotis lucifugus	60.00	2.00e-123	435.00
IUUC-Nle-069229	Nomascus leucogenys	60.00	3.00e-123	435.00
IUUC-Opr-070277	Ochotona princeps	49.15	1.00e-89	323.00
IUUC-Ont-071569	Oreochromis niloticus	60.28	2.00e-131	462.00
IUUC-Oan-073562	Ornithorhynchus anatinus	56.96	8.00e-131	460.00
IUUC-Ocu-074280	Oryctolagus cuniculus	60.00	2.00e-123	435.00
IUUC-Oba-075618	Oryza barthii	66.67	2.00e-149	522.00
IUUC-Obr-076718	Oryza brachyantha	68.61	5.00e-159	554.00
IUUC-Ogl-077302	Oryza glaberrima	68.99	2.00e-159	555.00
IUUC-Ogu-078718	Oryza glumaepatula	68.88	1.00e-159	556.00
IUUC-Oin-079515	Oryza indica	50.30	8.00e-79	288.00
IUUC-Olo-080427	Oryza longistaminata	72.33	9.00e-151	526.00
IUUC-Ome-081696	Oryza meridionalis	67.86	9.00e-155	540.00
IUUC-Oni-082137	Oryza nivara	68.88	1.00e-159	556.00
IUUC-Opu-083505	Oryza punctata	64.44	7.00e-150	523.00
IUUC-Oru-085276	Oryza rufipogon	68.88	9.00e-160	556.00
IUUC-Osa-085791	Oryza sativa	68.88	1.00e-159	556.00
IUUC-Ola-087365	Oryzias latipes	59.17	1.00e-129	456.00
IUUC-Olu-087589	Ostreococcus lucimarinus	60.11	2.00e-135	475.00
IUUC-Oga-088357	Otolemur garnettii	58.33	1.00e-114	406.00
IUUC-Oar-089214	Ovis aries	59.72	3.00e-131	461.00
IUUC-Ptr-091532	Pan troglodytes	60.00	3.00e-123	435.00
IUUC-Pan-091927	Papio anubis	60.00	3.00e-123	435.00
IUUC-Psi-093358	Pelodiscus sinensis	56.06	1.00e-130	459.00
IUUC-Pma-094105	Petromyzon marinus	57.58	7.00e-38	150.00
IUUC-Ppa-095868	Physcomitrella patens	68.93	5.00e-153	534.00
IUUC-Pfo-096158	Poecilia formosa	59.17	1.00e-130	459.00
IUUC-Pab-098705	Pongo abelii	60.00	3.00e-123	435.00
IUUC-Pop-098989	Populus trichocarpa	77.93	6.00e-176	609.00
IUUC-Pca-100256	Procavia capensis	59.27	7.00e-120	424.00
IUUC-Ppe-101572	Prunus persica	72.73	1.00e-154	539.00
IUUC-Pva-102616	Pteropus vampyrus	59.60	9.00e-120	423.00
IUUC-Rno-105411	Rattus norvegicus	60.00	2.00e-123	435.00
IUUC-Sha-106636	Sarcophilus harrisii	59.72	9.00e-123	433.00
IUUC-Smo-109301	Selaginella moellendorffii	68.51	5.00e-149	520.00
IUUC-Sit-110710	Setaria italica	69.69	4.00e-165	574.00
IUUC-Sly-111336	Solanum lycopersicum	68.88	4.00e-163	567.00
IUUC-Stu-112786	Solanum tuberosum	62.40	4.00e-142	498.00
IUUC-Sar-112971	Sorex araneus	51.54	1.00e-108	386.00
IUUC-Sbi-114420	Sorghum bicolor	68.91	4.00e-164	571.00
IUUC-Sre-115175	Sporisorium reilianum	40.28	6.00e-54	205.00
IUUC-Ssc-115695	Sus scrofa	60.00	2.00e-123	435.00
IUUC-Tgu-116898	Taeniopygia guttata	56.70	1.00e-130	459.00
IUUC-Tru-118254	Takifugu rubripes	60.00	1.00e-130	459.00
IUUC-Tsy-119424	Tarsius syrichta	47.86	1.00e-83	303.00
IUUC-Tni-119986	Tetraodon nigroviridis	60.00	3.00e-130	458.00
IUUC-Tca-121739	Theobroma cacao	74.07	0.00e+00	630.00
IUUC-Tae-125368	Triticum aestivum	69.92	1.00e-158	552.00
IUUC-Tur-126856	Triticum urartu	69.77	8.00e-79	287.00
IUUC-Tme-127126	Tuber melanosporum	34.95	2.00e-45	176.00
IUUC-Tbe-127767	Tupaia belangeri	58.69	1.00e-108	385.00
IUUC-Ttr-128826	Tursiops truncatus	56.20	1.00e-113	402.00
IUUC-Uma-129469	Ustilago maydis	43.08	1.00e-54	208.00
IUUC-Vpa-130768	Vicugna pacos	59.27	6.00e-120	424.00
IUUC-Vvi-131193	Vitis vinifera	74.02	1.00e-179	622.00
IUUC-Xtr-132842	Xenopus tropicalis	57.10	2.00e-115	409.00
IUUC-Xma-134168	Xiphophorus maculatus	59.72	1.00e-130	459.00
IUUC-Yli-134648	Yarrowia lipolytica	29.62	2.00e-38	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence