iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058624

Ensembl Protein ID

KEH31514

UniProt Accession

A0A072UNV5; A0A072UNV5_MEDTR

Genbank Protein ID

KEH31514.1

Protein Name

F-box-like/WD repeat TBL1XR1-like protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g095058

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g095058	KEH31513	KEH31513
MTR_4g095058	KEH31514	KEH31514

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-53	176.0	411	447
UBD/Beta-Prp	1.70e-70	239.0	223	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+c+++ ++ tll+s+sdD t k+W++++++ 
   Q: 411  GHQGEVNCVKWdPTgTLLASCSDDITAKIWSVKQDKY 447
           8***********888*****************99875 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           v++l+gh+++v++++++psg+ l+sGs d+t+r+w +++g c +                   +++++ v+++ ++++g ll++Gs+D++ r+W   +g+l
   Q: 223  VIILEGHTSEVCACAWCPSGSLLASGSGDSTARIWAIPEGRCKSGsqsvpldalvlrhvrgNTNEKSKDVTSIDWNGEGTLLATGSYDGQARIWTT-NGEL 322
           789****************************************989***************9999999**************************66.9*** PP
   S: 172  lrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
            +tl++ h++++ sl++++   ++++gs+d+t ++wd++++ec +++  h+ ++++v+    ++ ++s s D+ i++  +  + +++t+
   Q: 323  KTTLSK-HKGPIFSLKWNKRCDYILTGSCDQTAIVWDVKAEECKQQFGFHSGPTLDVDWR-TNTSFASSSTDNMIYVCKIGENHPTQTF 409
           ****99.***************************************************88.899999999*****99877777777776 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASITSVELN FLIFRYLNES GFTHSAYTFG NEASINKCPI DGNLVPPGAL VTFVQKGLQY 60
FEMEANLNNC DADLDEDFSL LQPLDLITKD VHELRQIISE RRKKLHKERS KELEKENEAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATAACCG CTTGTATTAT GATTTAGTAG GAAATAGACG GAAAAAGAGA AGAAGAAACG 60
GAAGCGTCGG AAAGTAAGTA ACGGTGGGGA GACGGAGCTG AACCTGACCC CTTGCGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	77.46	5.00e-69	252.00
IUUC-Aml-001717	Ailuropoda melanoleuca	60.44	2.00e-126	445.00
IUUC-Atr-002514	Amborella trichopoda	73.26	8.00e-170	589.00
IUUC-Apl-003708	Anas platyrhynchos	60.44	3.00e-126	444.00
IUUC-Aca-004611	Anolis carolinensis	60.44	2.00e-126	444.00
IUUC-Aly-005622	Arabidopsis lyrata	75.06	3.00e-173	601.00
IUUC-Ath-007137	Arabidopsis thaliana	71.83	1.00e-173	602.00
IUUC-Ame-011601	Astyanax mexicanus	60.99	2.00e-127	448.00
IUUC-Bta-012418	Bos taurus	59.89	3.00e-133	468.00
IUUC-Bdi-014315	Brachypodium distachyon	62.52	0.00e+00	703.00
IUUC-Bol-016277	Brassica oleracea	75.06	2.00e-178	618.00
IUUC-Bra-016944	Brassica rapa	75.06	3.00e-179	621.00
IUUC-Cja-018832	Callithrix jacchus	60.44	2.00e-126	445.00
IUUC-Cfa-020029	Canis familiaris	60.44	2.00e-126	445.00
IUUC-Cpo-021682	Cavia porcellus	60.44	7.00e-133	466.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	59.28	3.00e-126	444.00
IUUC-Csa-023943	Chlorocebus sabaeus	46.80	6.00e-144	503.00
IUUC-Cin-025704	Ciona intestinalis	45.97	2.00e-147	514.00
IUUC-Csv-026257	Ciona savignyi	47.24	3.00e-145	507.00
IUUC-Cme-027258	Cyanidioschyzon merolae	43.54	4.00e-94	338.00
IUUC-Dre-027906	Danio rerio	60.71	2.00e-126	444.00
IUUC-Dno-029196	Dasypus novemcinctus	60.44	2.00e-126	445.00
IUUC-Dor-030732	Dipodomys ordii	60.97	3.00e-122	431.00
IUUC-Dme-031939	Drosophila melanogaster	58.09	2.00e-121	429.00
IUUC-Ete-033150	Echinops telfairi	59.82	8.00e-112	396.00
IUUC-Eca-033897	Equus caballus	47.15	1.00e-148	518.00
IUUC-Eeu-034952	Erinaceus europaeus	52.22	1.00e-103	369.00
IUUC-Fca-035734	Felis catus	60.44	2.00e-126	445.00
IUUC-Fal-037185	Ficedula albicollis	60.44	2.00e-126	445.00
IUUC-Gmo-038870	Gadus morhua	59.89	7.00e-132	463.00
IUUC-Gga-041161	Gallus gallus	60.44	2.00e-126	445.00
IUUC-Gac-041851	Gasterosteus aculeatus	59.62	1.00e-130	459.00
IUUC-Gma-043369	Glycine max	83.25	0.00e+00	711.00
IUUC-Ggo-044882	Gorilla gorilla	60.44	2.00e-126	445.00
IUUC-Itr-047958	Ictidomys tridecemlineatus	60.44	2.00e-125	441.00
IUUC-Kpa-049338	Komagataella pastoris	29.30	1.00e-29	123.00
IUUC-Lch-050672	Latimeria chalumnae	59.89	2.00e-125	441.00
IUUC-Lpe-051084	Leersia perrieri	62.11	0.00e+00	703.00
IUUC-Loc-052030	Lepisosteus oculatus	60.71	6.00e-135	473.00
IUUC-Laf-054280	Loxodonta africana	60.16	5.00e-134	470.00
IUUC-Mcc-055124	Macaca mulatta	59.83	2.00e-128	451.00
IUUC-Meu-056563	Macropus eugenii	64.56	8.00e-88	316.00
IUUC-Mga-059660	Meleagris gallopavo	60.44	2.00e-126	445.00
IUUC-Mvi-060557	Microbotryum violaceum	37.86	1.00e-72	267.00
IUUC-Mmr-060925	Microcebus murinus	60.44	1.00e-125	442.00
IUUC-Mdo-062078	Monodelphis domestica	60.16	7.00e-126	443.00
IUUC-Mmu-063603	Mus musculus	60.71	7.00e-127	446.00
IUUC-Mac-065508	Musa acuminata	60.12	4.00e-154	537.00
IUUC-Mpu-066741	Mustela putorius furo	60.44	2.00e-126	445.00
IUUC-Mlu-068152	Myotis lucifugus	60.44	2.00e-126	445.00
IUUC-Nle-069151	Nomascus leucogenys	46.38	2.00e-147	515.00
IUUC-Opr-070277	Ochotona princeps	51.00	2.00e-93	335.00
IUUC-Ont-071569	Oreochromis niloticus	60.99	2.00e-135	474.00
IUUC-Oan-073562	Ornithorhynchus anatinus	47.50	2.00e-146	511.00
IUUC-Ocu-074280	Oryctolagus cuniculus	47.67	5.00e-145	506.00
IUUC-Oba-075618	Oryza barthii	61.31	0.00e+00	684.00
IUUC-Obr-076718	Oryza brachyantha	73.28	1.00e-167	582.00
IUUC-Ogl-077302	Oryza glaberrima	63.39	0.00e+00	723.00
IUUC-Ogu-078718	Oryza glumaepatula	63.39	0.00e+00	724.00
IUUC-Oin-079515	Oryza indica	55.48	3.00e-137	482.00
IUUC-Olo-080427	Oryza longistaminata	59.65	0.00e+00	649.00
IUUC-Ome-081696	Oryza meridionalis	62.69	0.00e+00	708.00
IUUC-Oni-082137	Oryza nivara	63.39	0.00e+00	724.00
IUUC-Opu-083505	Oryza punctata	61.49	0.00e+00	692.00
IUUC-Oru-085276	Oryza rufipogon	63.21	0.00e+00	723.00
IUUC-Osa-085791	Oryza sativa	63.39	0.00e+00	724.00
IUUC-Ola-087365	Oryzias latipes	60.16	1.00e-133	469.00
IUUC-Olu-087589	Ostreococcus lucimarinus	62.17	8.00e-144	503.00
IUUC-Oga-088357	Otolemur garnettii	58.52	3.00e-117	414.00
IUUC-Oar-089214	Ovis aries	60.16	4.00e-134	471.00
IUUC-Ptr-091532	Pan troglodytes	60.44	2.00e-126	445.00
IUUC-Pan-091909	Papio anubis	47.94	3.00e-149	521.00
IUUC-Psi-093941	Pelodiscus sinensis	60.27	7.00e-125	440.00
IUUC-Ppa-095868	Physcomitrella patens	68.88	1.00e-153	535.00
IUUC-Pfo-097214	Poecilia formosa	47.68	3.00e-143	501.00
IUUC-Pab-098317	Pongo abelii	48.23	2.00e-146	512.00
IUUC-Pop-098989	Populus trichocarpa	82.01	0.00e+00	642.00
IUUC-Pca-100256	Procavia capensis	59.72	5.00e-123	434.00
IUUC-Ppe-101572	Prunus persica	62.18	0.00e+00	653.00
IUUC-Pva-102616	Pteropus vampyrus	60.06	5.00e-123	434.00
IUUC-Rno-105411	Rattus norvegicus	60.44	3.00e-126	444.00
IUUC-Sce-106132	Saccharomyces cerevisiae	24.92	2.00e-36	146.00
IUUC-Smo-109205	Selaginella moellendorffii	66.31	8.00e-153	533.00
IUUC-Sit-110710	Setaria italica	60.45	0.00e+00	695.00
IUUC-Sly-111336	Solanum lycopersicum	73.47	2.00e-172	598.00
IUUC-Stu-112786	Solanum tuberosum	63.75	7.00e-154	536.00
IUUC-Sar-112971	Sorex araneus	52.63	7.00e-113	400.00
IUUC-Sbi-114420	Sorghum bicolor	62.76	0.00e+00	717.00
IUUC-Sre-115175	Sporisorium reilianum	41.53	3.00e-53	203.00
IUUC-Ssc-115695	Sus scrofa	60.44	2.00e-126	445.00
IUUC-Tgu-116898	Taeniopygia guttata	59.89	1.00e-132	466.00
IUUC-Tru-118254	Takifugu rubripes	60.71	1.00e-134	472.00
IUUC-Tsy-119424	Tarsius syrichta	47.70	1.00e-85	310.00
IUUC-Tni-119656	Tetraodon nigroviridis	57.07	1.00e-130	459.00
IUUC-Tca-121739	Theobroma cacao	76.24	0.00e+00	655.00
IUUC-Tae-125368	Triticum aestivum	61.73	0.00e+00	715.00
IUUC-Tur-126856	Triticum urartu	55.77	2.00e-115	408.00
IUUC-Tbe-127767	Tupaia belangeri	62.67	2.00e-113	401.00
IUUC-Ttr-128826	Tursiops truncatus	60.37	5.00e-116	410.00
IUUC-Vpa-130768	Vicugna pacos	59.72	4.00e-123	434.00
IUUC-Vvi-131193	Vitis vinifera	70.35	0.00e+00	810.00
IUUC-Xtr-132842	Xenopus tropicalis	57.85	3.00e-119	421.00
IUUC-Xma-133591	Xiphophorus maculatus	48.88	7.00e-145	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence