iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049260

Ensembl Protein ID

CAY68453

UniProt Accession

C4QYX9; C4QYX9_KOMPG

Genbank Protein ID

CAY68453.1

Protein Name

General negative regulator of transcription subunit 4

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-4_0594

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-4_0594	CAY68453	CAY68453

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	65.10	8.00e-91	329.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MMNNDDTFIS DQEEDVCPLC VEEMDISDKN FKPCPCGYQV CQFCYNNIRQ NPELNGKCPA 60
CRRPYEDKNV EYKVISQEEW KLNQAKQARK EKERKQKEKE KKDAEQASRR HLAGMRVIQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGAATA ATGACGATAC ATTCATATCG GATCAAGAAG AAGATGTTTG GTAAGTTATA 60
TTGTGTTTTT TGAAGCAACA GAAAGCTCGC TCAAGACGGG CTTTTCTTGA TGTTATAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR034261--CNOT4_RRM
IPR032710--NTF2-like_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50103--ZF_C3H1
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00360--RRM
SM00361--RRM_1

Gene Ontology

GO:0030015--C:CCR4-NOT core complex
GO:0005737--C:cytoplasm
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0032968--P:positive regulation of transcription elongation from RNA polymerase II promoter
GO:0010498--P:proteasomal protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

ppa:PAS_chr1-4_0594

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	36.30	2.00e-50	192.00
IUUC-Aml-002384	Ailuropoda melanoleuca	46.84	3.00e-55	207.00
IUUC-Atr-002462	Amborella trichopoda	36.65	2.00e-56	212.00
IUUC-Apl-003756	Anas platyrhynchos	46.84	8.00e-56	209.00
IUUC-Aca-004643	Anolis carolinensis	46.84	2.00e-55	208.00
IUUC-Aly-006093	Arabidopsis lyrata	37.34	6.00e-46	177.00
IUUC-Ath-007371	Arabidopsis thaliana	39.17	1.00e-49	189.00
IUUC-Ago-007799	Ashbya gossypii	71.31	3.00e-99	353.00
IUUC-Acl-008077	Aspergillus clavatus	49.52	2.00e-69	255.00
IUUC-Afl-008720	Aspergillus flavus	50.65	8.00e-77	280.00
IUUC-Afu-008905	Aspergillus fumigatus	45.67	2.00e-68	252.00
IUUC-Ani-009264	Aspergillus nidulans	47.83	3.00e-48	184.00
IUUC-Ang-009537	Aspergillus niger	51.15	2.00e-79	289.00
IUUC-Aor-010123	Aspergillus oryzae	49.51	8.00e-48	184.00
IUUC-Ate-010409	Aspergillus terreus	51.63	6.00e-77	281.00
IUUC-Ame-011538	Astyanax mexicanus	46.29	2.00e-47	181.00
IUUC-Bgr-012062	Blumeria graminis	49.68	4.00e-86	311.00
IUUC-Bta-012419	Bos taurus	46.84	2.00e-55	208.00
IUUC-Bci-013633	Botrytis cinerea	58.87	1.00e-81	296.00
IUUC-Bdi-014913	Brachypodium distachyon	37.86	2.00e-51	196.00
IUUC-Bol-016407	Brassica oleracea	34.06	1.00e-51	196.00
IUUC-Bra-017755	Brassica rapa	39.75	2.00e-51	195.00
IUUC-Cel-018123	Caenorhabditis elegans	38.15	4.00e-49	187.00
IUUC-Cja-019705	Callithrix jacchus	46.84	1.00e-55	209.00
IUUC-Cfa-020440	Canis familiaris	46.84	1.00e-55	209.00
IUUC-Cpo-022091	Cavia porcellus	45.15	7.00e-56	209.00
IUUC-Cre-022872	Chlamydomonas reinhardtii	43.75	6.00e-14	70.10
IUUC-Csa-024202	Chlorocebus sabaeus	46.84	1.00e-55	208.00
IUUC-Cho-024410	Choloepus hoffmanni	44.90	2.00e-38	152.00
IUUC-Cin-025558	Ciona intestinalis	40.96	7.00e-53	199.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	48.16	9.00e-79	286.00
IUUC-Cne-027084	Cryptococcus neoformans	37.03	2.00e-54	205.00
IUUC-Cme-027148	Cyanidioschyzon merolae	27.54	9.00e-19	86.70
IUUC-Dre-028377	Danio rerio	46.29	2.00e-47	182.00
IUUC-Dno-029100	Dasypus novemcinctus	46.84	2.00e-55	208.00
IUUC-Dor-030310	Dipodomys ordii	45.99	5.00e-50	190.00
IUUC-Dse-031514	Dothistroma septosporum	49.85	4.00e-80	290.00
IUUC-Dme-031735	Drosophila melanogaster	41.67	2.00e-48	185.00
IUUC-Ete-033091	Echinops telfairi	44.30	5.00e-51	193.00
IUUC-Eca-033506	Equus caballus	46.84	2.00e-55	208.00
IUUC-Eeu-034506	Erinaceus europaeus	41.35	6.00e-43	166.00
IUUC-Fca-036033	Felis catus	46.84	2.00e-55	207.00
IUUC-Fal-037540	Ficedula albicollis	46.84	8.00e-56	209.00
IUUC-Fox-037944	Fusarium oxysporum	49.05	8.00e-82	296.00
IUUC-Fso-038172	Fusarium solani	46.37	6.00e-68	251.00
IUUC-Gmo-039211	Gadus morhua	44.98	2.00e-47	181.00
IUUC-Ggr-040096	Gaeumannomyces graminis	54.22	3.00e-78	285.00
IUUC-Gga-040487	Gallus gallus	46.84	8.00e-56	209.00
IUUC-Gac-042294	Gasterosteus aculeatus	47.16	2.00e-45	175.00
IUUC-Gma-043229	Glycine max	39.58	2.00e-49	188.00
IUUC-Ggo-044950	Gorilla gorilla	44.09	9.00e-37	146.00
IUUC-Hsa-046666	Homo sapiens	46.84	2.00e-55	207.00
IUUC-Hvu-047405	Hordeum vulgare	33.53	2.00e-51	196.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	46.84	3.00e-54	202.00
IUUC-Lch-050203	Latimeria chalumnae	46.84	2.00e-55	208.00
IUUC-Lpe-051195	Leersia perrieri	38.19	6.00e-51	194.00
IUUC-Loc-052886	Lepisosteus oculatus	46.72	5.00e-48	183.00
IUUC-Lma-053073	Leptosphaeria maculans	58.44	1.00e-77	282.00
IUUC-Laf-053490	Loxodonta africana	46.84	1.00e-55	209.00
IUUC-Mcc-055724	Macaca mulatta	46.84	2.00e-55	208.00
IUUC-Meu-056787	Macropus eugenii	47.93	6.00e-25	107.00
IUUC-Mor-056921	Magnaporthe oryzae	55.42	5.00e-78	283.00
IUUC-Mpo-057616	Magnaporthe poae	55.02	4.00e-77	280.00
IUUC-Mtr-058426	Medicago truncatula	34.73	5.00e-50	191.00
IUUC-Mla-059146	Melampsora laricipopulina	40.49	4.00e-48	184.00
IUUC-Mga-059372	Meleagris gallopavo	46.84	7.00e-56	209.00
IUUC-Mvi-060479	Microbotryum violaceum	37.14	4.00e-44	171.00
IUUC-Mmr-061012	Microcebus murinus	46.84	1.00e-55	208.00
IUUC-Mdo-062330	Monodelphis domestica	46.84	1.00e-55	209.00
IUUC-Mmu-063894	Mus musculus	46.84	1.00e-55	208.00
IUUC-Mac-064805	Musa acuminata	41.67	7.00e-53	199.00
IUUC-Mpu-066894	Mustela putorius furo	46.84	1.00e-55	209.00
IUUC-Mlu-067321	Myotis lucifugus	46.84	2.00e-55	207.00
IUUC-Nfi-068451	Neosartorya fischeri	47.93	4.00e-71	261.00
IUUC-Ncr-068667	Neurospora crassa	48.59	2.00e-77	282.00
IUUC-Nle-070058	Nomascus leucogenys	45.76	2.00e-52	198.00
IUUC-Opr-071108	Ochotona princeps	49.06	2.00e-26	112.00
IUUC-Ont-071541	Oreochromis niloticus	47.16	2.00e-45	175.00
IUUC-Oan-073232	Ornithorhynchus anatinus	46.84	1.00e-55	209.00
IUUC-Ocu-074893	Oryctolagus cuniculus	46.84	1.00e-55	208.00
IUUC-Oba-075623	Oryza barthii	38.71	4.00e-26	109.00
IUUC-Obr-076653	Oryza brachyantha	33.53	1.00e-51	196.00
IUUC-Ogl-077946	Oryza glaberrima	39.25	2.00e-39	153.00
IUUC-Ogu-078775	Oryza glumaepatula	38.15	8.00e-49	184.00
IUUC-Oin-079214	Oryza indica	35.61	5.00e-50	190.00
IUUC-Olo-080799	Oryza longistaminata	29.96	2.00e-21	93.60
IUUC-Ome-081843	Oryza meridionalis	34.86	4.00e-47	180.00
IUUC-Oni-082944	Oryza nivara	39.49	3.00e-26	109.00
IUUC-Opu-083668	Oryza punctata	35.61	4.00e-50	191.00
IUUC-Oru-084249	Oryza rufipogon	35.00	3.00e-38	151.00
IUUC-Osa-086233	Oryza sativa	35.91	5.00e-50	191.00
IUUC-Ola-087121	Oryzias latipes	47.16	3.00e-45	174.00
IUUC-Olu-087772	Ostreococcus lucimarinus	38.16	9.00e-38	147.00
IUUC-Oga-088556	Otolemur garnettii	46.84	1.00e-55	208.00
IUUC-Oar-089768	Ovis aries	46.84	1.00e-55	208.00
IUUC-Ptr-090585	Pan troglodytes	46.84	2.00e-55	208.00
IUUC-Pan-092625	Papio anubis	46.84	1.00e-55	208.00
IUUC-Psi-093462	Pelodiscus sinensis	46.84	2.00e-55	208.00
IUUC-Pma-094468	Petromyzon marinus	45.15	1.00e-47	182.00
IUUC-Pno-094812	Phaeosphaeria nodorum	51.32	7.00e-46	177.00
IUUC-Ppa-095589	Physcomitrella patens	48.98	4.00e-14	70.10
IUUC-Pfo-096762	Poecilia formosa	47.16	2.00e-45	174.00
IUUC-Pab-097890	Pongo abelii	46.84	1.00e-55	208.00
IUUC-Pop-099764	Populus trichocarpa	36.12	4.00e-51	194.00
IUUC-Pca-101121	Procavia capensis	42.86	8.00e-31	126.00
IUUC-Ppe-102076	Prunus persica	40.83	3.00e-50	191.00
IUUC-Pva-102489	Pteropus vampyrus	46.84	4.00e-55	207.00
IUUC-Pgr-103568	Puccinia graminis	38.96	3.00e-48	184.00
IUUC-Ptt-103721	Puccinia triticina	34.72	9.00e-25	107.00
IUUC-Pte-104118	Pyrenophora teres	49.54	2.00e-84	304.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	51.08	7.00e-86	309.00
IUUC-Rno-105627	Rattus norvegicus	46.84	2.00e-55	208.00
IUUC-Sce-106312	Saccharomyces cerevisiae	65.49	5.00e-93	333.00
IUUC-Sha-106619	Sarcophilus harrisii	46.84	1.00e-55	209.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	45.18	4.00e-73	266.00
IUUC-Spo-108328	Schizosaccharomyces pombe	56.22	1.00e-73	268.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	58.47	2.00e-74	271.00
IUUC-Smo-108760	Selaginella moellendorffii	41.98	1.00e-54	203.00
IUUC-Sit-109923	Setaria italica	38.65	3.00e-50	192.00
IUUC-Sly-110900	Solanum lycopersicum	37.19	3.00e-46	178.00
IUUC-Stu-112226	Solanum tuberosum	37.19	5.00e-46	177.00
IUUC-Sar-113620	Sorex araneus	46.84	1.00e-53	202.00
IUUC-Sbi-114318	Sorghum bicolor	37.50	3.00e-50	191.00
IUUC-Sre-114956	Sporisorium reilianum	49.53	2.00e-80	291.00
IUUC-Ssc-116116	Sus scrofa	46.84	3.00e-54	202.00
IUUC-Tgu-117357	Taeniopygia guttata	46.84	8.00e-56	209.00
IUUC-Tru-118759	Takifugu rubripes	46.72	7.00e-47	179.00
IUUC-Tsy-119387	Tarsius syrichta	46.84	5.00e-55	207.00
IUUC-Tni-120536	Tetraodon nigroviridis	44.54	2.00e-47	181.00
IUUC-Tca-121035	Theobroma cacao	37.19	2.00e-48	185.00
IUUC-Tre-121996	Trichoderma reesei	45.60	2.00e-67	249.00
IUUC-Tvi-122371	Trichoderma virens	46.34	2.00e-76	279.00
IUUC-Tae-124373	Triticum aestivum	33.53	6.00e-52	197.00
IUUC-Tur-126324	Triticum urartu	33.53	1.00e-51	196.00
IUUC-Tme-127072	Tuber melanosporum	53.53	3.00e-64	238.00
IUUC-Tbe-128107	Tupaia belangeri	46.41	2.00e-54	204.00
IUUC-Ttr-128846	Tursiops truncatus	46.84	8.00e-55	206.00
IUUC-Uma-129607	Ustilago maydis	50.66	4.00e-81	294.00
IUUC-Vda-129971	Verticillium dahliae	43.42	4.00e-62	231.00
IUUC-Vpa-130298	Vicugna pacos	41.10	2.00e-43	168.00
IUUC-Vvi-131651	Vitis vinifera	34.82	5.00e-49	187.00
IUUC-Xtr-132728	Xenopus tropicalis	47.16	5.00e-55	206.00
IUUC-Xma-133789	Xiphophorus maculatus	47.16	3.00e-45	174.00
IUUC-Yli-134461	Yarrowia lipolytica	62.70	3.00e-97	346.00
IUUC-Zma-135031	Zea mays	35.38	3.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence