iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112587

Ensembl Protein ID

PGSC0003DMT400019938

UniProt Accession

M1ACT5; M1ACT5_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400007716	PGSC0003DMT400019938	PGSC0003DMT400019938
PGSC0003DMG400007716	PGSC0003DMT400019941	PGSC0003DMT400019941

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-16	60.0	266	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+ +a+ +d t+l+++++  ++k+WD+ tg++ ++
   Q: 266  HEKPVSFVAWsPDdTMLLTCGNIEVLKLWDVETGTCKHT 304
           9999*******777**********************885 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

METPLANLGS KKLIKKHEFV RVIIQCLYSL GYRKSAVSLE SESGISYKSD EFETLESCIR 60
DANWDACIET LNRLNGLTNE TRASALFLVL KQWFLEYLNL GEDSLALEIL QKKMSGLEVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGACTC CATTGGCTAA TCTTGGGTCG AAAAAGCTAA TAAAGAAGCA TGAATTTGTT 60
AGGGTCATCA TTCAATGTCT ATATTCTTTA GGTTACAGAA AGTCTGCTGT GAGTTTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005958	Arabidopsis lyrata	59.95	2.00e-151	527.00
IUUC-Ath-006873	Arabidopsis thaliana	60.18	2.00e-155	541.00
IUUC-Bdi-014476	Brachypodium distachyon	48.98	5.00e-118	416.00
IUUC-Bol-015916	Brassica oleracea	59.59	3.00e-156	543.00
IUUC-Bra-017911	Brassica rapa	59.23	3.00e-156	545.00
IUUC-Cne-026805	Cryptococcus neoformans	28.87	1.00e-36	146.00
IUUC-Gma-043704	Glycine max	65.24	1.00e-162	565.00
IUUC-Hvu-047777	Hordeum vulgare	48.27	1.00e-112	398.00
IUUC-Mtr-058724	Medicago truncatula	60.79	1.00e-166	578.00
IUUC-Opr-071198	Ochotona princeps	48.94	7.00e-20	90.90
IUUC-Olo-080734	Oryza longistaminata	48.41	2.00e-107	381.00
IUUC-Pop-098968	Populus trichocarpa	70.16	3.00e-122	430.00
IUUC-Ppe-101881	Prunus persica	68.20	9.00e-177	612.00
IUUC-Sly-111624	Solanum lycopersicum	80.10	2.00e-86	310.00
IUUC-Tur-126823	Triticum urartu	43.44	3.00e-107	382.00
IUUC-Tbe-128063	Tupaia belangeri	27.73	2.00e-14	72.40
IUUC-Uma-129354	Ustilago maydis	33.33	7.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence