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Tag Content
UUCD2 ID IUUC-Ppa-095365
UUCD1 version UUC-PhP-00480
Ensembl Protein ID PP1S234_65V6.1
UniProt Accession A9THW9; A9THW9_PHYPA
Genbank Protein ID EDQ56973.1
Protein Name Predicted protein
Genbank Nucleotide ID DS545123
Gene Name PHYPADRAFT_195222
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S234_65V6 PP1S234_65V6.1 PP1S234_65V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.40e-18 66.2 88 121
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gHtd vt++af s+ + ++s++ D +i+v+ l++
   Q: 88   GHTDAVTGIAFsSNgRGIASACADRVIRVFKLDD 121
           8**********9664559************9865 PP
   
Organism Physcomitrella patens
Protein Sequence
(Fasta)
MADAAASSSS PALLVTLVTV FLGLLTFVLL ALRSRASKPE SSPAHATSPT DFATQPAKKS 60
TNPKQRSLAA KKAHPQRHHH LEINMLKGHT DAVTGIAFSS NGRGIASACA DRVIRVFKLD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ppa-095365|E3,WD_repeat|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCGTGGCAT TGCAATTGCA GCAAATCGAT CAGCCATGGC GGATGCCGCC GCCTCCTCCT 60
CCTCCCCTGC GTTGCTGGTG ACCCTCGTCA CCGTCTTCCT GGGTTTACTC ACCTTCGTGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ppa-095365|E3,WD_repeat|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0016021--C:integral component of membrane
KEGG ppp:PHYPADRAFT_195222
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000109 Aegilops tauschii 56.93 2.00e-63 234.00
IUUC-Aml-002212 Ailuropoda melanoleuca 30.21 3.00e-39 155.00
IUUC-Atr-002903 Amborella trichopoda 52.57 8.00e-129 452.00
IUUC-Apl-003635 Anas platyrhynchos 28.44 4.00e-34 137.00
IUUC-Aca-004472 Anolis carolinensis 30.82 3.00e-35 142.00
IUUC-Aly-005761 Arabidopsis lyrata 57.18 3.00e-128 451.00
IUUC-Ath-007476 Arabidopsis thaliana 54.08 7.00e-131 459.00
IUUC-Ame-011221 Astyanax mexicanus 30.46 1.00e-38 153.00
IUUC-Bta-013186 Bos taurus 29.28 4.00e-38 151.00
IUUC-Bdi-014298 Brachypodium distachyon 56.30 2.00e-120 424.00
IUUC-Bol-015192 Brassica oleracea 52.68 3.00e-125 440.00
IUUC-Bra-017078 Brassica rapa 53.04 8.00e-127 446.00
IUUC-Cel-018602 Caenorhabditis elegans 26.41 7.00e-25 107.00
IUUC-Cja-018909 Callithrix jacchus 29.91 4.00e-37 148.00
IUUC-Cfa-020970 Canis familiaris 30.38 9.00e-39 153.00
IUUC-Cpo-022215 Cavia porcellus 29.70 3.00e-37 148.00
IUUC-Cre-022949 Chlamydomonas reinhardtii 40.45 1.00e-34 138.00
IUUC-Csa-023530 Chlorocebus sabaeus 29.39 2.00e-40 159.00
IUUC-Cho-024598 Choloepus hoffmanni 27.72 5.00e-23 101.00
IUUC-Cin-025486 Ciona intestinalis 25.96 4.00e-31 128.00
IUUC-Csv-025930 Ciona savignyi 26.13 2.00e-23 102.00
IUUC-Dre-027507 Danio rerio 30.95 7.00e-40 157.00
IUUC-Dno-029726 Dasypus novemcinctus 29.59 6.00e-37 147.00
IUUC-Dor-030501 Dipodomys ordii 37.70 3.00e-33 135.00
IUUC-Ete-032794 Echinops telfairi 38.42 8.00e-34 136.00
IUUC-Eca-033982 Equus caballus 29.11 2.00e-34 139.00
IUUC-Eeu-035090 Erinaceus europaeus 34.38 3.00e-33 135.00
IUUC-Fca-035944 Felis catus 29.33 1.00e-38 153.00
IUUC-Fal-036992 Ficedula albicollis 29.55 3.00e-36 145.00
IUUC-Gmo-038710 Gadus morhua 28.72 8.00e-38 150.00
IUUC-Gga-040885 Gallus gallus 33.33 1.00e-28 119.00
IUUC-Gac-041922 Gasterosteus aculeatus 30.84 4.00e-40 158.00
IUUC-Gma-044233 Glycine max 60.93 7.00e-131 459.00
IUUC-Ggo-045172 Gorilla gorilla 30.21 1.00e-38 153.00
IUUC-Hsa-045711 Homo sapiens 29.11 3.00e-39 155.00
IUUC-Itr-048196 Ictidomys tridecemlineatus 29.79 1.00e-38 153.00
IUUC-Lch-049739 Latimeria chalumnae 31.82 2.00e-40 159.00
IUUC-Lpe-050795 Leersia perrieri 50.70 1.00e-98 352.00
IUUC-Loc-052113 Lepisosteus oculatus 29.73 4.00e-36 144.00
IUUC-Laf-053751 Loxodonta africana 29.78 2.00e-38 152.00
IUUC-Mcc-055022 Macaca mulatta 29.39 3.00e-40 159.00
IUUC-Meu-056003 Macropus eugenii 29.45 6.00e-33 134.00
IUUC-Mtr-058500 Medicago truncatula 59.67 5.00e-129 453.00
IUUC-Mga-059278 Meleagris gallopavo 34.38 5.00e-29 120.00
IUUC-Mmr-061148 Microcebus murinus 31.27 1.00e-39 156.00
IUUC-Mdo-063002 Monodelphis domestica 29.13 1.00e-32 133.00
IUUC-Mmu-063607 Mus musculus 28.74 9.00e-37 147.00
IUUC-Mac-065359 Musa acuminata 59.13 3.00e-128 451.00
IUUC-Mpu-066323 Mustela putorius furo 29.81 2.00e-36 145.00
IUUC-Mlu-067946 Myotis lucifugus 29.50 6.00e-39 154.00
IUUC-Nle-069019 Nomascus leucogenys 30.68 1.00e-38 153.00
IUUC-Opr-071047 Ochotona princeps 29.88 8.00e-40 157.00
IUUC-Ont-071694 Oreochromis niloticus 29.86 2.00e-38 152.00
IUUC-Ocu-074493 Oryctolagus cuniculus 30.00 3.00e-37 148.00
IUUC-Oba-075468 Oryza barthii 53.43 3.00e-118 417.00
IUUC-Obr-076681 Oryza brachyantha 56.42 8.00e-114 402.00
IUUC-Ogl-077870 Oryza glaberrima 53.43 3.00e-118 417.00
IUUC-Ogu-078536 Oryza glumaepatula 53.43 4.00e-118 417.00
IUUC-Oin-080175 Oryza indica 53.43 3.00e-118 417.00
IUUC-Olo-080796 Oryza longistaminata 56.39 4.00e-117 414.00
IUUC-Oni-082076 Oryza nivara 53.43 3.00e-118 417.00
IUUC-Opu-083267 Oryza punctata 55.03 3.00e-117 414.00
IUUC-Oru-084553 Oryza rufipogon 53.43 2.00e-118 418.00
IUUC-Osa-085389 Oryza sativa 53.43 3.00e-118 417.00
IUUC-Ola-086414 Oryzias latipes 30.47 4.00e-39 154.00
IUUC-Oga-088656 Otolemur garnettii 30.68 1.00e-37 150.00
IUUC-Oar-089719 Ovis aries 28.24 7.00e-38 150.00
IUUC-Ptr-091087 Pan troglodytes 29.11 4.00e-39 155.00
IUUC-Pan-091709 Papio anubis 29.39 3.00e-40 158.00
IUUC-Psi-093265 Pelodiscus sinensis 28.02 6.00e-35 140.00
IUUC-Pfo-097494 Poecilia formosa 31.63 1.00e-40 159.00
IUUC-Pab-098362 Pongo abelii 29.39 9.00e-40 157.00
IUUC-Pop-099163 Populus trichocarpa 60.50 2.00e-128 452.00
IUUC-Pca-101019 Procavia capensis 37.89 3.00e-34 138.00
IUUC-Ppe-102101 Prunus persica 55.20 9.00e-134 469.00
IUUC-Pva-102849 Pteropus vampyrus 30.49 9.00e-38 150.00
IUUC-Rno-105511 Rattus norvegicus 28.74 7.00e-37 147.00
IUUC-Sha-107265 Sarcophilus harrisii 28.99 5.00e-34 138.00
IUUC-Smo-108866 Selaginella moellendorffii 61.67 1.00e-131 462.00
IUUC-Sit-110806 Setaria italica 56.09 1.00e-117 415.00
IUUC-Sly-110994 Solanum lycopersicum 55.00 4.00e-121 427.00
IUUC-Stu-112493 Solanum tuberosum 60.31 5.00e-93 333.00
IUUC-Sar-113628 Sorex araneus 30.79 8.00e-38 150.00
IUUC-Sbi-114397 Sorghum bicolor 56.58 1.00e-118 419.00
IUUC-Ssc-116418 Sus scrofa 31.07 2.00e-41 162.00
IUUC-Tgu-117054 Taeniopygia guttata 29.41 3.00e-38 151.00
IUUC-Tru-118504 Takifugu rubripes 28.68 2.00e-39 155.00
IUUC-Tni-120254 Tetraodon nigroviridis 29.05 7.00e-40 157.00
IUUC-Tca-121085 Theobroma cacao 58.74 6.00e-129 453.00
IUUC-Tae-124351 Triticum aestivum 55.74 2.00e-119 421.00
IUUC-Tur-126756 Triticum urartu 50.54 3.00e-106 377.00
IUUC-Tbe-127903 Tupaia belangeri 30.18 7.00e-36 144.00
IUUC-Ttr-129118 Tursiops truncatus 29.49 1.00e-38 152.00
IUUC-Vvi-131125 Vitis vinifera 61.75 3.00e-134 470.00
IUUC-Xtr-132287 Xenopus tropicalis 30.09 6.00e-37 147.00
IUUC-Xma-134246 Xiphophorus maculatus 31.33 6.00e-41 160.00
Created Date 25-Jun-2017

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