iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099714

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_589822; POPTR_0001s16230g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s16230	POPTR_0001s16230.1	POPTR_0001s16230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	8.70e-27	94.7	9	129

Active Site

Position(s)	Description	Evidence
87	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilk.eee 90
           Rl+ke+ +l k+p+++++a+p+ + d+ ew+++++G e+tp++gg++  +i+fp++YP+kPP + ++t+  ++ + ++ k+Cls+ + ++e
   Q: 9    RLQKEYRALCKEPVSHVVARPSPS-DILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGIIMITP--NGRFMTQKKICLSMSDfHPE 96
           9**********************9.9*******************************************..999************889** PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaa 123
            W+p++sv+s+l+++ s++++  p  +  +  a
   Q: 97   SWNPMWSVSSILTGLLSFMTDNSPTTGSVNTTA 129
           *******************99777666554444 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAEKSCVKRL QKEYRALCKE PVSHVVARPS PSDILEWHYV LEGSEGTPFA GGYYYGKIKF 60
PPEYPYKPPG IIMITPNGRF MTQKKICLSM SDFHPESWNP MWSVSSILTG LLSFMTDNSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGGTCG TACGTACGAT CTTAAACTCT CTCTCTCCCT TGCCGTTACA TGAGTTTTTT 60
TTTTTAATCT TCTGCTTCGA TTGTTCGTTT GAGCTTTAGA TTCTGACATC TGATTCTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0000209--P:protein polyubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pop:POPTR_0001s16230g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002152	Ailuropoda melanoleuca	53.49	6.00e-55	206.00
IUUC-Atr-003156	Amborella trichopoda	66.67	5.00e-89	319.00
IUUC-Apl-004224	Anas platyrhynchos	56.21	1.00e-51	195.00
IUUC-Aca-005049	Anolis carolinensis	54.39	7.00e-54	203.00
IUUC-Aly-005734	Arabidopsis lyrata	74.48	2.00e-106	377.00
IUUC-Ath-006640	Arabidopsis thaliana	72.13	3.00e-94	337.00
IUUC-Ago-007987	Ashbya gossypii	39.61	2.00e-44	171.00
IUUC-Acl-008060	Aspergillus clavatus	52.70	1.00e-43	169.00
IUUC-Afl-008561	Aspergillus flavus	52.03	2.00e-43	168.00
IUUC-Afu-008860	Aspergillus fumigatus	52.70	2.00e-43	168.00
IUUC-Ani-009333	Aspergillus nidulans	52.70	2.00e-43	168.00
IUUC-Ang-009810	Aspergillus niger	52.70	2.00e-43	168.00
IUUC-Aor-010127	Aspergillus oryzae	52.03	2.00e-43	168.00
IUUC-Ate-010362	Aspergillus terreus	52.03	5.00e-43	167.00
IUUC-Ame-010627	Astyanax mexicanus	51.45	1.00e-53	202.00
IUUC-Bgr-012069	Blumeria graminis	47.97	2.00e-39	154.00
IUUC-Bta-012472	Bos taurus	52.91	2.00e-54	204.00
IUUC-Bci-013843	Botrytis cinerea	49.01	7.00e-41	160.00
IUUC-Bdi-014467	Brachypodium distachyon	59.34	5.00e-82	296.00
IUUC-Bol-016116	Brassica oleracea	74.17	1.00e-101	361.00
IUUC-Bra-017777	Brassica rapa	75.11	2.00e-103	367.00
IUUC-Cel-018278	Caenorhabditis elegans	46.56	1.00e-43	168.00
IUUC-Cja-018817	Callithrix jacchus	55.24	1.00e-45	176.00
IUUC-Cfa-020885	Canis familiaris	52.91	2.00e-54	204.00
IUUC-Cpo-022326	Cavia porcellus	49.23	9.00e-55	206.00
IUUC-Cre-022635	Chlamydomonas reinhardtii	63.52	4.00e-63	232.00
IUUC-Csa-023646	Chlorocebus sabaeus	53.49	6.00e-55	206.00
IUUC-Cho-025075	Choloepus hoffmanni	44.76	3.00e-32	130.00
IUUC-Cin-025389	Ciona intestinalis	51.61	5.00e-49	186.00
IUUC-Csv-026315	Ciona savignyi	40.00	1.00e-49	189.00
IUUC-Cgl-026602	Colletotrichum gloeosporioides	42.33	6.00e-41	160.00
IUUC-Cne-026808	Cryptococcus neoformans	45.86	8.00e-38	149.00
IUUC-Dre-028455	Danio rerio	53.71	9.00e-55	206.00
IUUC-Dno-029667	Dasypus novemcinctus	54.07	1.00e-54	206.00
IUUC-Dor-030747	Dipodomys ordii	49.65	1.00e-39	155.00
IUUC-Dse-031231	Dothistroma septosporum	49.65	8.00e-39	153.00
IUUC-Dme-031841	Drosophila melanogaster	50.00	6.00e-52	196.00
IUUC-Ete-032258	Echinops telfairi	47.34	2.00e-48	185.00
IUUC-Eeu-034443	Erinaceus europaeus	55.74	3.00e-39	154.00
IUUC-Fca-036167	Felis catus	48.28	9.00e-45	172.00
IUUC-Fal-037114	Ficedula albicollis	56.21	2.00e-51	194.00
IUUC-Fox-037957	Fusarium oxysporum	38.36	3.00e-41	161.00
IUUC-Fso-038277	Fusarium solani	54.55	3.00e-44	171.00
IUUC-Gmo-039501	Gadus morhua	49.13	3.00e-52	197.00
IUUC-Ggr-040010	Gaeumannomyces graminis	51.05	4.00e-41	160.00
IUUC-Gga-041257	Gallus gallus	56.21	1.00e-51	195.00
IUUC-Gac-041433	Gasterosteus aculeatus	50.87	7.00e-54	202.00
IUUC-Gma-043529	Glycine max	81.59	3.00e-113	400.00
IUUC-Ggo-044437	Gorilla gorilla	55.03	3.00e-46	177.00
IUUC-Hsa-046693	Homo sapiens	53.49	9.00e-55	206.00
IUUC-Itr-048477	Ictidomys tridecemlineatus	49.23	2.00e-54	204.00
IUUC-Kpa-049391	Komagataella pastoris	45.41	1.00e-42	165.00
IUUC-Lch-049617	Latimeria chalumnae	55.56	5.00e-51	193.00
IUUC-Lpe-050949	Leersia perrieri	59.58	2.00e-80	291.00
IUUC-Loc-052157	Lepisosteus oculatus	51.16	4.00e-53	200.00
IUUC-Lma-053128	Leptosphaeria maculans	49.32	2.00e-41	161.00
IUUC-Laf-054455	Loxodonta africana	52.33	6.00e-54	203.00
IUUC-Mcc-054756	Macaca mulatta	53.49	6.00e-55	206.00
IUUC-Meu-056106	Macropus eugenii	56.56	2.00e-39	155.00
IUUC-Mor-057202	Magnaporthe oryzae	50.68	4.00e-42	164.00
IUUC-Mpo-057349	Magnaporthe poae	51.05	3.00e-41	161.00
IUUC-Mtr-058271	Medicago truncatula	76.76	3.00e-102	363.00
IUUC-Mla-058894	Melampsora laricipopulina	56.64	8.00e-46	175.00
IUUC-Mga-059493	Meleagris gallopavo	56.21	1.00e-51	195.00
IUUC-Mvi-060232	Microbotryum violaceum	40.41	5.00e-50	190.00
IUUC-Mmr-060957	Microcebus murinus	52.91	5.00e-54	203.00
IUUC-Mdo-062141	Monodelphis domestica	52.91	2.00e-54	204.00
IUUC-Mmu-063882	Mus musculus	51.74	1.00e-53	202.00
IUUC-Mac-064510	Musa acuminata	62.18	4.00e-84	303.00
IUUC-Mpu-065902	Mustela putorius furo	53.49	6.00e-55	206.00
IUUC-Mlu-068008	Myotis lucifugus	52.33	2.00e-52	198.00
IUUC-Nfi-068515	Neosartorya fischeri	52.70	1.00e-43	169.00
IUUC-Ncr-068755	Neurospora crassa	48.65	4.00e-41	160.00
IUUC-Opr-071201	Ochotona princeps	51.06	5.00e-39	153.00
IUUC-Ont-071311	Oreochromis niloticus	50.29	2.00e-53	201.00
IUUC-Oan-073310	Ornithorhynchus anatinus	48.72	2.00e-54	204.00
IUUC-Ocu-074514	Oryctolagus cuniculus	52.91	5.00e-54	203.00
IUUC-Oba-075200	Oryza barthii	59.58	4.00e-79	286.00
IUUC-Obr-076396	Oryza brachyantha	59.75	9.00e-84	302.00
IUUC-Ogl-077398	Oryza glaberrima	58.33	5.00e-77	279.00
IUUC-Ogu-078362	Oryza glumaepatula	59.58	4.00e-79	286.00
IUUC-Oin-079625	Oryza indica	59.58	4.00e-79	286.00
IUUC-Olo-080620	Oryza longistaminata	47.49	5.00e-55	206.00
IUUC-Ome-081187	Oryza meridionalis	59.58	4.00e-79	286.00
IUUC-Oni-082271	Oryza nivara	59.58	4.00e-79	286.00
IUUC-Opu-083487	Oryza punctata	59.17	4.00e-78	283.00
IUUC-Oru-085263	Oryza rufipogon	59.58	4.00e-79	286.00
IUUC-Osa-085694	Oryza sativa	59.58	4.00e-79	286.00
IUUC-Ola-086450	Oryzias latipes	50.87	2.00e-53	201.00
IUUC-Olu-087733	Ostreococcus lucimarinus	42.50	3.00e-32	130.00
IUUC-Oga-088054	Otolemur garnettii	45.02	1.00e-49	189.00
IUUC-Oar-089486	Ovis aries	52.91	2.00e-54	204.00
IUUC-Pan-092633	Papio anubis	53.49	6.00e-55	206.00
IUUC-Pno-095025	Phaeosphaeria nodorum	48.03	6.00e-42	163.00
IUUC-Ppa-095641	Physcomitrella patens	59.76	3.00e-87	313.00
IUUC-Pfo-096423	Poecilia formosa	55.19	3.00e-51	194.00
IUUC-Pab-097771	Pongo abelii	53.49	6.00e-55	206.00
IUUC-Ppe-102054	Prunus persica	80.33	2.00e-111	394.00
IUUC-Pva-102224	Pteropus vampyrus	53.14	3.00e-53	201.00
IUUC-Pgr-103530	Puccinia graminis	50.63	3.00e-49	187.00
IUUC-Ptt-103776	Puccinia triticina	55.06	3.00e-49	187.00
IUUC-Pte-104166	Pyrenophora teres	51.05	6.00e-41	160.00
IUUC-Pyt-104570	Pyrenophora triticirepentis	51.05	7.00e-41	160.00
IUUC-Rno-105593	Rattus norvegicus	51.74	1.00e-53	202.00
IUUC-Sce-106212	Saccharomyces cerevisiae	43.75	2.00e-51	194.00
IUUC-Sha-106767	Sarcophilus harrisii	52.33	6.00e-54	203.00
IUUC-Sja-107907	Schizosaccharomyces japonicus	52.12	3.00e-50	191.00
IUUC-Spo-108094	Schizosaccharomyces pombe	52.12	4.00e-49	187.00
IUUC-Ssl-108556	Sclerotinia sclerotiorum	47.68	8.00e-40	156.00
IUUC-Smo-108965	Selaginella moellendorffii	61.70	5.00e-86	309.00
IUUC-Sit-110407	Setaria italica	60.42	4.00e-80	290.00
IUUC-Sly-111642	Solanum lycopersicum	76.57	3.00e-101	360.00
IUUC-Stu-112336	Solanum tuberosum	74.15	1.00e-91	328.00
IUUC-Sbi-114327	Sorghum bicolor	61.09	7.00e-83	299.00
IUUC-Sre-115170	Sporisorium reilianum	52.44	2.00e-41	162.00
IUUC-Ssc-116385	Sus scrofa	52.91	3.00e-54	204.00
IUUC-Tgu-117041	Taeniopygia guttata	56.21	1.00e-51	195.00
IUUC-Tru-117697	Takifugu rubripes	50.29	2.00e-53	201.00
IUUC-Tsy-119024	Tarsius syrichta	47.67	9.00e-43	166.00
IUUC-Tni-120466	Tetraodon nigroviridis	49.71	2.00e-51	194.00
IUUC-Tca-121569	Theobroma cacao	81.67	6.00e-113	399.00
IUUC-Tre-121882	Trichoderma reesei	50.68	7.00e-43	166.00
IUUC-Tvi-122466	Trichoderma virens	49.32	4.00e-42	164.00
IUUC-Tae-124592	Triticum aestivum	59.34	2.00e-79	288.00
IUUC-Tur-126536	Triticum urartu	59.66	2.00e-81	294.00
IUUC-Tme-127051	Tuber melanosporum	49.35	1.00e-42	166.00
IUUC-Tbe-128095	Tupaia belangeri	55.00	2.00e-37	148.00
IUUC-Ttr-128466	Tursiops truncatus	52.91	2.00e-54	204.00
IUUC-Uma-129383	Ustilago maydis	52.44	1.00e-41	162.00
IUUC-Vda-130013	Verticillium dahliae	51.08	2.00e-40	158.00
IUUC-Vvi-131251	Vitis vinifera	79.32	2.00e-106	378.00
IUUC-Xtr-132408	Xenopus tropicalis	52.33	2.00e-54	204.00
IUUC-Xma-133893	Xiphophorus maculatus	55.19	2.00e-51	194.00
IUUC-Yli-134618	Yarrowia lipolytica	48.37	1.00e-43	169.00
IUUC-Zma-135216	Zea mays	61.51	7.00e-84	302.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence