iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003124

Ensembl Protein ID

ERN08911

UniProt Accession

W1PMI0; W1PMI0_AMBTC

Genbank Protein ID

ERN08911.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393208

Gene Name

AMTR_s00015p00234510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00015p00234510	ERN08911	ERN08911

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-06	27.4	161	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH ++v+ l++  s+ +l++ + D  +++W 
   Q: 161  GHDGEVWQLDWdmSGMTLATVGSDRMVRLWQ 191
           8**********8877669************5 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSLQLSQVVA FADGHVKIYE LQDPLELKRW QLQAEFQNVM DFLARSGKPS CVSASIAWNP 60
QKPQSQRAAF VLGFNSDLPQ FNSSKIWEFD ETHQRWQPVA ELALPGDEGD QVHALAWAPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCACTGC AACTTTCTCA GGTTGTTGCA TTTGCAGATG GTCATGTGAA AATATATGAA 60
TTACAAGACC CACTTGAACT AAAACGATGG CAGCTTCAGG TACATGTACA TCAGTTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005963	Arabidopsis lyrata	68.16	4.00e-81	293.00
IUUC-Ath-007107	Arabidopsis thaliana	68.66	5.00e-82	296.00
IUUC-Bdi-014594	Brachypodium distachyon	65.52	3.00e-81	293.00
IUUC-Bol-016565	Brassica oleracea	67.16	6.00e-79	286.00
IUUC-Bra-017831	Brassica rapa	67.66	1.00e-79	288.00
IUUC-Gma-044300	Glycine max	68.66	7.00e-85	305.00
IUUC-Hvu-047455	Hordeum vulgare	65.02	5.00e-81	293.00
IUUC-Lpe-051064	Leersia perrieri	67.00	3.00e-82	297.00
IUUC-Meu-055958	Macropus eugenii	27.23	1.00e-14	73.20
IUUC-Mtr-057876	Medicago truncatula	65.20	5.00e-81	293.00
IUUC-Mac-064960	Musa acuminata	70.53	2.00e-87	314.00
IUUC-Opr-070773	Ochotona princeps	23.04	8.00e-05	40.00
IUUC-Oba-075325	Oryza barthii	67.66	2.00e-83	301.00
IUUC-Obr-076089	Oryza brachyantha	66.50	6.00e-82	296.00
IUUC-Ogl-077279	Oryza glaberrima	67.49	9.00e-84	302.00
IUUC-Ogu-078901	Oryza glumaepatula	66.83	8.00e-83	298.00
IUUC-Oin-079385	Oryza indica	67.49	6.00e-84	303.00
IUUC-Ome-081809	Oryza meridionalis	67.49	2.00e-84	305.00
IUUC-Oni-082185	Oryza nivara	67.66	1.00e-83	301.00
IUUC-Opu-083324	Oryza punctata	67.50	1.00e-82	298.00
IUUC-Oru-084801	Oryza rufipogon	67.49	8.00e-84	302.00
IUUC-Osa-085790	Oryza sativa	67.49	9.00e-84	302.00
IUUC-Olu-087855	Ostreococcus lucimarinus	27.05	1.00e-09	55.80
IUUC-Ppa-095228	Physcomitrella patens	49.50	4.00e-56	210.00
IUUC-Pop-099015	Populus trichocarpa	69.15	7.00e-82	296.00
IUUC-Ppe-101303	Prunus persica	72.14	5.00e-88	316.00
IUUC-Smo-108721	Selaginella moellendorffii	45.59	5.00e-51	193.00
IUUC-Sit-110393	Setaria italica	66.01	4.00e-80	290.00
IUUC-Sly-111125	Solanum lycopersicum	67.66	1.00e-81	295.00
IUUC-Stu-112745	Solanum tuberosum	67.33	2.00e-82	298.00
IUUC-Sbi-114110	Sorghum bicolor	65.02	2.00e-80	291.00
IUUC-Tca-120999	Theobroma cacao	56.67	9.00e-75	273.00
IUUC-Tae-122890	Triticum aestivum	65.52	6.00e-82	296.00
IUUC-Tur-126582	Triticum urartu	65.52	2.00e-82	298.00
IUUC-Tbe-127344	Tupaia belangeri	25.91	8.00e-13	67.00
IUUC-Vvi-131103	Vitis vinifera	72.64	3.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence