iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111125

Ensembl Protein ID

Solyc08g082100.2.1

UniProt Accession

K4CPK6; K4CPK6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g082100.2	Solyc08g082100.2.1	Solyc08g082100.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-14	53.3	278	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           +H ++v+ +++  s+ +l++ + Dg++++W 
   Q: 278  THDSEVWQMEWdmSGMTLATTGSDGVVRLWQ 308
           599********887766899999*******6 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDKAIIKLEE GTTCTAWNYS GHRLAAGSTD GTLFVFDSTD PASSVFSGSS KFKVHESSIV 60
KVVWAPPEYG DVVACICADG SLLLWEEVVE DSELLQWKLC KCFDRISSLV LDVQFGVSQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCCAAAAA CCCTAGAAGA GAAAAGGGGT TTTTAGAACC AGCAAAATCT GCAGATTTAG 60
GGTTTAAGAT TTGTTACATT TGGTGAAGAA GGAAGAATGG ATAAAGCAAT TATTAAGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	67.66	5.00e-82	296.00
IUUC-Apl-003654	Anas platyrhynchos	28.82	2.00e-28	119.00
IUUC-Aca-004378	Anolis carolinensis	27.68	2.00e-28	119.00
IUUC-Aly-005963	Arabidopsis lyrata	67.18	4.00e-125	440.00
IUUC-Ath-007107	Arabidopsis thaliana	66.87	7.00e-127	446.00
IUUC-Bdi-014594	Brachypodium distachyon	60.94	8.00e-118	415.00
IUUC-Bol-016565	Brassica oleracea	66.36	2.00e-123	434.00
IUUC-Bra-017831	Brassica rapa	67.39	3.00e-124	437.00
IUUC-Cho-024660	Choloepus hoffmanni	28.12	6.00e-28	117.00
IUUC-Dre-028068	Danio rerio	27.81	1.00e-34	139.00
IUUC-Eca-033425	Equus caballus	28.12	7.00e-28	117.00
IUUC-Fal-037234	Ficedula albicollis	29.60	6.00e-28	120.00
IUUC-Gma-044300	Glycine max	71.17	2.00e-132	464.00
IUUC-Hvu-047455	Hordeum vulgare	60.31	2.00e-116	410.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	28.47	3.00e-28	118.00
IUUC-Lpe-051064	Leersia perrieri	60.00	1.00e-117	415.00
IUUC-Meu-055958	Macropus eugenii	27.27	1.00e-17	83.60
IUUC-Mtr-057876	Medicago truncatula	66.46	1.00e-126	445.00
IUUC-Mla-058820	Melampsora laricipopulina	23.94	2.00e-16	79.00
IUUC-Mga-059348	Meleagris gallopavo	29.18	6.00e-29	120.00
IUUC-Mac-064960	Musa acuminata	62.85	5.00e-114	403.00
IUUC-Nle-068977	Nomascus leucogenys	27.80	5.00e-29	120.00
IUUC-Opr-070773	Ochotona princeps	23.22	2.00e-11	62.80
IUUC-Oan-073098	Ornithorhynchus anatinus	28.83	4.00e-29	121.00
IUUC-Oba-075325	Oryza barthii	56.56	1.00e-104	372.00
IUUC-Obr-076089	Oryza brachyantha	59.06	1.00e-114	405.00
IUUC-Ogl-077279	Oryza glaberrima	59.38	3.00e-114	404.00
IUUC-Ogu-078901	Oryza glumaepatula	56.25	3.00e-104	370.00
IUUC-Oin-079385	Oryza indica	55.75	6.00e-112	396.00
IUUC-Ome-081809	Oryza meridionalis	63.84	7.00e-108	384.00
IUUC-Oni-082185	Oryza nivara	54.38	4.00e-99	353.00
IUUC-Opu-083324	Oryza punctata	57.19	1.00e-109	388.00
IUUC-Oru-084801	Oryza rufipogon	59.69	5.00e-115	406.00
IUUC-Osa-085790	Oryza sativa	59.38	3.00e-114	404.00
IUUC-Oar-090298	Ovis aries	30.69	8.00e-27	116.00
IUUC-Psi-093508	Pelodiscus sinensis	28.71	9.00e-30	123.00
IUUC-Ppa-095228	Physcomitrella patens	43.55	4.00e-72	263.00
IUUC-Pop-099015	Populus trichocarpa	69.23	4.00e-134	469.00
IUUC-Ppe-101303	Prunus persica	71.17	2.00e-138	483.00
IUUC-Rno-104895	Rattus norvegicus	30.32	6.00e-31	130.00
IUUC-Sha-106829	Sarcophilus harrisii	28.12	4.00e-29	121.00
IUUC-Smo-109282	Selaginella moellendorffii	44.62	3.00e-74	270.00
IUUC-Sit-110393	Setaria italica	61.25	1.00e-118	418.00
IUUC-Stu-112745	Solanum tuberosum	87.05	0.00e+00	628.00
IUUC-Sar-113279	Sorex araneus	28.11	1.00e-27	116.00
IUUC-Sbi-114110	Sorghum bicolor	59.38	4.00e-117	413.00
IUUC-Ssc-115589	Sus scrofa	28.62	6.00e-28	117.00
IUUC-Tru-117985	Takifugu rubripes	27.65	2.00e-27	118.00
IUUC-Tsy-118913	Tarsius syrichta	27.80	2.00e-24	106.00
IUUC-Tca-120999	Theobroma cacao	64.56	2.00e-124	439.00
IUUC-Tae-122796	Triticum aestivum	61.25	3.00e-119	420.00
IUUC-Tur-126582	Triticum urartu	62.14	4.00e-105	374.00
IUUC-Tbe-127344	Tupaia belangeri	27.52	5.00e-17	81.30
IUUC-Ttr-128347	Tursiops truncatus	28.82	5.00e-28	117.00
IUUC-Vpa-130656	Vicugna pacos	29.89	6.00e-28	117.00
IUUC-Vvi-131103	Vitis vinifera	73.85	2.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence