iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-085139

Ensembl Protein ID

ORUFI01G05280.2

UniProt Accession

A0A0E0MS42; A0A0E0MS42_ORYRU

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI01G05280	ORUFI01G05280.1	ORUFI01G05280.1
ORUFI01G05280	ORUFI01G05280.2	ORUFI01G05280.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.80e-42	146.3	356	797
UBD/Alpha-Helix/UBA	1.20e-16	61.4	675	713

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 41   npkepkgellkslqklfeelw........kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedksel 126
           +p +p+ +l ++++kl + ++        ++ ++ + pr+++++++++++efs+++qqDa +f+ +l+dq++++                    
   Q: 356  APADPTLDLNMQMTKLAHGMLsgkysvpnQEGQEGIHPRMFKTVIAAKHPEFSSMRQQDALDFFLHLIDQVDQAN------------------- 430
           34788889************76666667688888**************************************988................... PP
   S: 127  sdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.............................slqdcL 191
                   ++ ++    + F++ ++++++c++  +vs  + + + lsl++p +e t+ke                              l+ cL
   Q: 431  --------TRNHELNPFTGFKFIIEERLQCPSG-KVSYNKRSDYILSLNIPLHEATNKEqleafhekkaamdldgkevsneeivrprvPLEACL 515
           ........33344445578***********985.566566667888888888887777788********************************* PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts.................. 267
           +sf+ +ee+ +   +y++  ++k++a k+ ++k++P++L+l++ +f + e++++++k++ +v++p+ +d+s++ ++                  
   Q: 516  ASFSGAEEVPE---FYSTALNSKTTAIKTAGFKTFPDYLVLQMRKF-VMEAGWVPKKLDVYVDVPDIIDISHMRSKgiqsgeellpegasgdnk 605
           *********96...********************************.77889*******************99999888888888888888888 PP
   S: 268  ................................................................peekqke....................... 274
                                                                                 e                       
   Q: 606  aepvhpvasedivsqlasmgfnylhcqkaaistsntgveeamnwllshmddpdindpiskdsqaA-----Eqtvdetsvqtlvsfgfqedvark 694
           88888777777777777777777777777777777776666666666666666666666555550.....055555666666666666666666 PP
   S: 275  .............................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeev 322
                                                        + +Y+L+a v+H+G s+++GHYva+v + +g+W+ f+DskV ++   + 
   Q: 695  alaasggnieratdwifshpeafssvptdsstsnmedddahipdgSGRYKLMAFVSHMGtSTHCGHYVAHVLK-DGRWVIFNDSKVAAS--VDL 785
           677777777777777777777777777777777888999999999****************************.9***********999..688 PP
   S: 323  leetgstaYvlfYkr 337
            +   + +Y++f++r
   Q: 786  PK---DMGYLYFFQR 797
           88...999**99997 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de  ++ lv+ GF ++ a++aL+a+++n+e+A+++++++
   Q: 675  DETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSH 713
           7999*********************************97 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MDLLRSHLHK VRIPEPGSRI HKDECCVSFD TPRSEGGLYV DMTSFLGFGR EHVAWNYEKS 60
GNPVYLHIVQ RRKPEPDDEA DRPLKKPTLL AIGVEGGFTD QEPEYDEAFE IVILPEFTSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCTAATCA CTCCTCCCCT CTTCCACCCT CCCCCCACCT CGTCGCCTCG CCGTCTCCAT 60
CCCCAAAACC CTAGCCGCCG CCGCGCTCCT CCTCCTCCGC CGCCGCCCGG CGCCGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP

SMART

SM00165--UBA
SM00290--ZnF_UBP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000394	Aegilops tauschii	82.11	0.00e+00	1288.00
IUUC-Aml-002104	Ailuropoda melanoleuca	45.81	0.00e+00	720.00
IUUC-Atr-002580	Amborella trichopoda	70.50	2.00e-164	572.00
IUUC-Apl-003774	Anas platyrhynchos	45.94	0.00e+00	704.00
IUUC-Aca-005368	Anolis carolinensis	47.70	0.00e+00	753.00
IUUC-Aly-005727	Arabidopsis lyrata	65.30	0.00e+00	1084.00
IUUC-Ath-006974	Arabidopsis thaliana	65.54	0.00e+00	1088.00
IUUC-Ago-007890	Ashbya gossypii	27.23	2.00e-67	250.00
IUUC-Acl-008057	Aspergillus clavatus	34.11	1.00e-115	410.00
IUUC-Afl-008547	Aspergillus flavus	34.98	9.00e-105	373.00
IUUC-Afu-008805	Aspergillus fumigatus	36.44	4.00e-99	355.00
IUUC-Ani-009441	Aspergillus nidulans	37.01	9.00e-90	324.00
IUUC-Ang-009720	Aspergillus niger	33.61	1.00e-105	377.00
IUUC-Aor-010111	Aspergillus oryzae	33.13	2.00e-112	399.00
IUUC-Ate-010531	Aspergillus terreus	32.42	6.00e-94	338.00
IUUC-Ame-011470	Astyanax mexicanus	40.70	0.00e+00	633.00
IUUC-Bgr-012183	Blumeria graminis	30.97	4.00e-99	355.00
IUUC-Bta-013179	Bos taurus	46.14	0.00e+00	725.00
IUUC-Bci-013858	Botrytis cinerea	31.53	1.00e-105	377.00
IUUC-Bdi-014904	Brachypodium distachyon	85.19	0.00e+00	1373.00
IUUC-Bol-015536	Brassica oleracea	65.94	0.00e+00	1083.00
IUUC-Bra-017939	Brassica rapa	65.86	0.00e+00	1084.00
IUUC-Cel-018625	Caenorhabditis elegans	31.57	6.00e-109	387.00
IUUC-Cja-019063	Callithrix jacchus	45.12	0.00e+00	715.00
IUUC-Cfa-020976	Canis familiaris	47.40	0.00e+00	736.00
IUUC-Cpo-022265	Cavia porcellus	47.23	0.00e+00	736.00
IUUC-Cre-022640	Chlamydomonas reinhardtii	42.77	4.00e-120	424.00
IUUC-Csa-024177	Chlorocebus sabaeus	47.34	0.00e+00	642.00
IUUC-Cho-024522	Choloepus hoffmanni	34.96	3.00e-124	438.00
IUUC-Cin-025411	Ciona intestinalis	42.15	6.00e-180	624.00
IUUC-Csv-026347	Ciona savignyi	41.90	2.00e-179	622.00
IUUC-Cgl-026667	Colletotrichum gloeosporioides	30.57	2.00e-89	323.00
IUUC-Cne-026831	Cryptococcus neoformans	33.57	2.00e-107	382.00
IUUC-Cme-027335	Cyanidioschyzon merolae	29.36	4.00e-30	126.00
IUUC-Dre-027651	Danio rerio	41.37	0.00e+00	670.00
IUUC-Dno-029034	Dasypus novemcinctus	46.38	0.00e+00	731.00
IUUC-Dor-030130	Dipodomys ordii	35.95	3.00e-98	352.00
IUUC-Dse-031467	Dothistroma septosporum	32.98	3.00e-107	382.00
IUUC-Dme-032075	Drosophila melanogaster	42.64	0.00e+00	633.00
IUUC-Ete-032865	Echinops telfairi	43.46	0.00e+00	657.00
IUUC-Eca-034059	Equus caballus	46.16	0.00e+00	724.00
IUUC-Eeu-035304	Erinaceus europaeus	43.84	0.00e+00	644.00
IUUC-Fca-035515	Felis catus	46.14	0.00e+00	729.00
IUUC-Fal-037271	Ficedula albicollis	47.04	0.00e+00	691.00
IUUC-Fox-037745	Fusarium oxysporum	32.93	4.00e-109	388.00
IUUC-Fso-038158	Fusarium solani	31.78	3.00e-104	372.00
IUUC-Gmo-039071	Gadus morhua	43.02	0.00e+00	634.00
IUUC-Ggr-040098	Gaeumannomyces graminis	30.87	4.00e-99	355.00
IUUC-Gga-040635	Gallus gallus	46.50	0.00e+00	749.00
IUUC-Gac-042528	Gasterosteus aculeatus	42.03	0.00e+00	648.00
IUUC-Gma-043614	Glycine max	64.78	0.00e+00	1059.00
IUUC-Ggo-044602	Gorilla gorilla	46.26	0.00e+00	729.00
IUUC-Hsa-045959	Homo sapiens	46.26	0.00e+00	729.00
IUUC-Hvu-047563	Hordeum vulgare	83.02	0.00e+00	1048.00
IUUC-Itr-048712	Ictidomys tridecemlineatus	45.80	0.00e+00	731.00
IUUC-Kpa-049156	Komagataella pastoris	30.63	4.00e-98	352.00
IUUC-Lch-049648	Latimeria chalumnae	46.81	0.00e+00	730.00
IUUC-Lpe-051523	Leersia perrieri	90.37	0.00e+00	1490.00
IUUC-Loc-052072	Lepisosteus oculatus	41.72	0.00e+00	636.00
IUUC-Lma-053216	Leptosphaeria maculans	32.85	7.00e-102	365.00
IUUC-Laf-054327	Loxodonta africana	46.26	0.00e+00	731.00
IUUC-Mcc-055443	Macaca mulatta	46.14	0.00e+00	724.00
IUUC-Meu-056298	Macropus eugenii	49.08	5.00e-148	518.00
IUUC-Mor-057106	Magnaporthe oryzae	32.22	1.00e-106	380.00
IUUC-Mpo-057589	Magnaporthe poae	31.15	3.00e-101	362.00
IUUC-Mtr-058680	Medicago truncatula	64.78	0.00e+00	1085.00
IUUC-Mla-058903	Melampsora laricipopulina	31.18	2.00e-96	346.00
IUUC-Mga-059669	Meleagris gallopavo	45.92	0.00e+00	696.00
IUUC-Mvi-060476	Microbotryum violaceum	31.94	4.00e-95	342.00
IUUC-Mmr-060575	Microcebus murinus	46.38	0.00e+00	726.00
IUUC-Mdo-062183	Monodelphis domestica	46.28	0.00e+00	725.00
IUUC-Mmu-063592	Mus musculus	46.49	0.00e+00	733.00
IUUC-Mac-065634	Musa acuminata	68.64	1.00e-180	625.00
IUUC-Mpu-066082	Mustela putorius furo	47.40	0.00e+00	729.00
IUUC-Mlu-067345	Myotis lucifugus	45.46	0.00e+00	718.00
IUUC-Nfi-068558	Neosartorya fischeri	34.01	6.00e-112	397.00
IUUC-Ncr-068960	Neurospora crassa	29.93	4.00e-91	328.00
IUUC-Nle-070173	Nomascus leucogenys	47.40	0.00e+00	735.00
IUUC-Opr-070556	Ochotona princeps	46.03	0.00e+00	737.00
IUUC-Ont-071502	Oreochromis niloticus	44.59	0.00e+00	657.00
IUUC-Oan-072959	Ornithorhynchus anatinus	51.33	3.00e-62	231.00
IUUC-Ocu-074861	Oryctolagus cuniculus	47.16	0.00e+00	743.00
IUUC-Oba-075109	Oryza barthii	96.62	0.00e+00	1565.00
IUUC-Obr-076292	Oryza brachyantha	89.36	0.00e+00	1415.00
IUUC-Ogl-077065	Oryza glaberrima	94.49	0.00e+00	1556.00
IUUC-Ogu-078776	Oryza glumaepatula	96.24	0.00e+00	1561.00
IUUC-Oin-080048	Oryza indica	93.88	0.00e+00	1524.00
IUUC-Olo-080711	Oryza longistaminata	94.06	0.00e+00	1438.00
IUUC-Ome-081506	Oryza meridionalis	96.17	0.00e+00	1448.00
IUUC-Oni-082320	Oryza nivara	99.50	0.00e+00	1603.00
IUUC-Opu-083801	Oryza punctata	94.74	0.00e+00	1489.00
IUUC-Osa-085713	Oryza sativa	94.49	0.00e+00	1558.00
IUUC-Ola-086951	Oryzias latipes	41.92	0.00e+00	632.00
IUUC-Olu-087822	Ostreococcus lucimarinus	39.57	3.00e-159	555.00
IUUC-Oga-088625	Otolemur garnettii	45.28	0.00e+00	718.00
IUUC-Oar-089995	Ovis aries	45.29	0.00e+00	717.00
IUUC-Ptr-090640	Pan troglodytes	45.34	0.00e+00	726.00
IUUC-Pan-091974	Papio anubis	45.35	0.00e+00	717.00
IUUC-Psi-093957	Pelodiscus sinensis	46.16	0.00e+00	750.00
IUUC-Pma-094242	Petromyzon marinus	44.68	3.00e-92	331.00
IUUC-Pno-094835	Phaeosphaeria nodorum	36.56	3.00e-96	345.00
IUUC-Ppa-095901	Physcomitrella patens	58.65	0.00e+00	988.00
IUUC-Pfo-097148	Poecilia formosa	43.53	0.00e+00	652.00
IUUC-Pab-098672	Pongo abelii	40.28	5.00e-174	604.00
IUUC-Pop-098943	Populus trichocarpa	68.44	0.00e+00	1102.00
IUUC-Pca-100738	Procavia capensis	43.45	2.00e-134	473.00
IUUC-Ppe-101315	Prunus persica	66.63	0.00e+00	1087.00
IUUC-Pva-102154	Pteropus vampyrus	45.80	0.00e+00	719.00
IUUC-Pgr-103343	Puccinia graminis	31.06	3.00e-89	322.00
IUUC-Ptt-103928	Puccinia triticina	29.93	1.00e-86	313.00
IUUC-Pte-104306	Pyrenophora teres	35.04	1.00e-88	320.00
IUUC-Pyt-104696	Pyrenophora triticirepentis	35.66	1.00e-92	334.00
IUUC-Rno-105801	Rattus norvegicus	46.49	0.00e+00	733.00
IUUC-Sce-106304	Saccharomyces cerevisiae	30.25	3.00e-68	253.00
IUUC-Sha-107635	Sarcophilus harrisii	47.34	0.00e+00	730.00
IUUC-Sja-107678	Schizosaccharomyces japonicus	30.58	1.00e-88	320.00
IUUC-Spo-108144	Schizosaccharomyces pombe	31.98	6.00e-107	381.00
IUUC-Smo-108848	Selaginella moellendorffii	57.07	0.00e+00	899.00
IUUC-Sit-110728	Setaria italica	84.58	0.00e+00	1405.00
IUUC-Sly-111523	Solanum lycopersicum	63.65	0.00e+00	1094.00
IUUC-Stu-112498	Solanum tuberosum	61.76	3.00e-07	49.70
IUUC-Sar-113733	Sorex araneus	41.63	4.00e-82	298.00
IUUC-Sbi-114419	Sorghum bicolor	84.58	0.00e+00	1395.00
IUUC-Sre-115225	Sporisorium reilianum	31.66	5.00e-95	342.00
IUUC-Ssc-115686	Sus scrofa	45.22	0.00e+00	724.00
IUUC-Tgu-117346	Taeniopygia guttata	46.22	0.00e+00	729.00
IUUC-Tru-118350	Takifugu rubripes	41.51	0.00e+00	635.00
IUUC-Tsy-119278	Tarsius syrichta	37.49	7.00e-154	537.00
IUUC-Tni-120658	Tetraodon nigroviridis	41.58	5.00e-179	620.00
IUUC-Tca-121585	Theobroma cacao	66.95	0.00e+00	1087.00
IUUC-Tre-122043	Trichoderma reesei	32.69	2.00e-104	373.00
IUUC-Tvi-122303	Trichoderma virens	32.61	1.00e-103	370.00
IUUC-Tae-123798	Triticum aestivum	83.35	0.00e+00	1377.00
IUUC-Tur-126732	Triticum urartu	81.95	0.00e+00	1338.00
IUUC-Tme-126909	Tuber melanosporum	32.27	7.00e-95	341.00
IUUC-Tbe-127261	Tupaia belangeri	39.20	1.00e-110	394.00
IUUC-Ttr-129119	Tursiops truncatus	49.48	1.00e-100	360.00
IUUC-Uma-129599	Ustilago maydis	32.66	7.00e-106	377.00
IUUC-Vda-129688	Verticillium dahliae	31.97	3.00e-98	352.00
IUUC-Vpa-130170	Vicugna pacos	35.11	1.00e-134	473.00
IUUC-Vvi-131116	Vitis vinifera	68.67	0.00e+00	1089.00
IUUC-Xtr-131953	Xenopus tropicalis	45.13	0.00e+00	686.00
IUUC-Xma-133837	Xiphophorus maculatus	43.41	0.00e+00	650.00
IUUC-Yli-134510	Yarrowia lipolytica	32.72	3.00e-101	362.00
IUUC-Zma-135786	Zea mays	82.50	0.00e+00	1331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence