iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptt-103868

Ensembl Protein ID

PTTG_02115P0

UniProt Accession

A0A0C4EMX5; A0A0C4EMX5_PUCT1

Genbank Protein ID

OAV96090.1

Protein Name

Coatomer subunit beta'

Genbank Nucleotide ID

ADAS01002178

Gene Name

PTTG_02115

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTTG_02115	PTTG_02115T0	PTTG_02115P0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-32	107.6	96	126
UBD/Beta-Prp	4.60e-67	225.5	13	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d ++cla  ++ +l+++GsdD tik+WD+
   Q: 96   HPDYIRCLAVhPTqPLVLTGSDDMTIKLWDW 126
           99********9888****************7 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
           ++++++v+f+p +++l++g ++g++ vw ++tg ll+++   e +v++ +f+ +++++v gs+D +++v++++t+  v ++++h d++++l+++p++
   Q: 13   SERVKSVDFHPTEPWLLAGLYSGKVFVWHTETGALLKTFTPTEVPVRCARFIARKNWFVCGSDDFHLRVFNYNTSARVAAFEAHPDYIRCLAVHPTQ 109
           67899******************************************************************************************** PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsl 200
             +++Gs+d ti++wd+++ ++  ++++gh++ ++ ++++p++ n ++s++lDrtv++W+l + +   tl   h++ v+ +++ + g  ++lv+ ++
   Q: 110  PLVLTGSDDMTIKLWDWDKSWKCLQVFEGHTHYIMNLAFNPKDsNTFASSCLDRTVKVWSLGSHTANFTLDA-HEKGVNYVEYYHGGdkPYLVTTGD 205
           ******************9987777*********************************************98.*********9988888******** PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskv 289
           d+ +k+wd+ +++c++tl+gh++nv+   f+p   +++sgs+Dg+++iW + +  l +tl++  ++ ++v++ + ++n + lg ++++v
   Q: 206  DRLIKIWDYLSKSCIQTLEGHQSNVSYAIFHPSLPIIISGSEDGTVKIWHSSTYRLENTLNYGLERAWCVTY-GKNGNDIGLGFDEGSV 293
           ***********************************************************************9.6667766555444444 PP

Organism

Puccinia triticina

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Protein Sequence
(Fasta)

MLLDITRKLL TRSERVKSVD FHPTEPWLLA GLYSGKVFVW HTETGALLKT FTPTEVPVRC 60
ARFIARKNWF VCGSDDFHLR VFNYNTSARV AAFEAHPDYI RCLAVHPTQP LVLTGSDDMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCTAG ATATCACTCG CAAGCTTCTC ACACGGTCTG GTCGGTCTTC GCAAATTTTT 60
ACGTTGTCAT TTGCTTTTGG TATAATCGTG GAGCTGATTG ATCTTTTGAC TGAATCGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030663--C:COPI-coated vesicle membrane
GO:0000139--C:Golgi membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	45.72	0.00e+00	765.00
IUUC-Aml-002154	Ailuropoda melanoleuca	54.55	0.00e+00	939.00
IUUC-Atr-003090	Amborella trichopoda	50.96	0.00e+00	877.00
IUUC-Apl-003976	Anas platyrhynchos	53.96	0.00e+00	940.00
IUUC-Aca-004301	Anolis carolinensis	54.67	0.00e+00	943.00
IUUC-Aly-005643	Arabidopsis lyrata	52.61	0.00e+00	892.00
IUUC-Ath-007635	Arabidopsis thaliana	52.52	0.00e+00	898.00
IUUC-Ago-007914	Ashbya gossypii	48.28	0.00e+00	778.00
IUUC-Acl-008237	Aspergillus clavatus	58.50	0.00e+00	1006.00
IUUC-Afl-008535	Aspergillus flavus	57.92	0.00e+00	964.00
IUUC-Afu-008845	Aspergillus fumigatus	58.74	0.00e+00	990.00
IUUC-Ani-009135	Aspergillus nidulans	57.59	0.00e+00	971.00
IUUC-Ang-009654	Aspergillus niger	61.49	0.00e+00	885.00
IUUC-Aor-009939	Aspergillus oryzae	58.32	0.00e+00	1020.00
IUUC-Ate-010355	Aspergillus terreus	58.37	0.00e+00	976.00
IUUC-Ame-010922	Astyanax mexicanus	48.64	0.00e+00	795.00
IUUC-Bgr-012249	Blumeria graminis	55.28	0.00e+00	941.00
IUUC-Bta-013579	Bos taurus	54.52	0.00e+00	843.00
IUUC-Bci-013866	Botrytis cinerea	57.24	0.00e+00	956.00
IUUC-Bdi-015046	Brachypodium distachyon	52.93	0.00e+00	903.00
IUUC-Bol-016271	Brassica oleracea	52.64	0.00e+00	912.00
IUUC-Bra-017758	Brassica rapa	52.75	0.00e+00	903.00
IUUC-Cel-018387	Caenorhabditis elegans	49.52	0.00e+00	869.00
IUUC-Cja-019145	Callithrix jacchus	54.55	0.00e+00	938.00
IUUC-Cfa-020564	Canis familiaris	54.55	0.00e+00	938.00
IUUC-Cpo-022201	Cavia porcellus	54.55	0.00e+00	938.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	51.77	0.00e+00	850.00
IUUC-Csa-023383	Chlorocebus sabaeus	58.63	0.00e+00	737.00
IUUC-Cho-024454	Choloepus hoffmanni	51.71	0.00e+00	805.00
IUUC-Cin-025681	Ciona intestinalis	51.47	0.00e+00	872.00
IUUC-Csv-026012	Ciona savignyi	53.00	0.00e+00	868.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	53.08	0.00e+00	844.00
IUUC-Cne-026986	Cryptococcus neoformans	63.00	0.00e+00	1099.00
IUUC-Cme-027219	Cyanidioschyzon merolae	43.44	0.00e+00	793.00
IUUC-Dre-027846	Danio rerio	53.56	0.00e+00	934.00
IUUC-Dor-030462	Dipodomys ordii	53.23	0.00e+00	750.00
IUUC-Dse-031268	Dothistroma septosporum	57.37	0.00e+00	981.00
IUUC-Dme-031791	Drosophila melanogaster	51.90	0.00e+00	878.00
IUUC-Ete-033166	Echinops telfairi	51.70	1.00e-175	607.00
IUUC-Eca-034180	Equus caballus	53.61	0.00e+00	904.00
IUUC-Eeu-035086	Erinaceus europaeus	42.27	4.00e-93	333.00
IUUC-Fca-036265	Felis catus	54.55	0.00e+00	938.00
IUUC-Fal-037202	Ficedula albicollis	53.15	0.00e+00	897.00
IUUC-Fox-037711	Fusarium oxysporum	57.28	0.00e+00	896.00
IUUC-Fso-038268	Fusarium solani	56.90	0.00e+00	890.00
IUUC-Gmo-039046	Gadus morhua	53.55	0.00e+00	928.00
IUUC-Ggr-039863	Gaeumannomyces graminis	57.53	0.00e+00	922.00
IUUC-Gga-041112	Gallus gallus	54.67	0.00e+00	941.00
IUUC-Gac-041733	Gasterosteus aculeatus	52.56	0.00e+00	901.00
IUUC-Gma-044333	Glycine max	53.71	0.00e+00	917.00
IUUC-Ggo-044984	Gorilla gorilla	54.55	0.00e+00	937.00
IUUC-Hsa-046698	Homo sapiens	54.55	0.00e+00	938.00
IUUC-Hvu-047669	Hordeum vulgare	59.49	7.00e-137	478.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	54.55	0.00e+00	936.00
IUUC-Kpa-049265	Komagataella pastoris	50.96	0.00e+00	904.00
IUUC-Lch-050473	Latimeria chalumnae	54.55	0.00e+00	941.00
IUUC-Lpe-051579	Leersia perrieri	54.06	0.00e+00	919.00
IUUC-Loc-052675	Lepisosteus oculatus	54.05	0.00e+00	936.00
IUUC-Lma-053218	Leptosphaeria maculans	54.83	0.00e+00	934.00
IUUC-Laf-053757	Loxodonta africana	54.53	0.00e+00	934.00
IUUC-Mcc-054859	Macaca mulatta	54.55	0.00e+00	938.00
IUUC-Meu-056174	Macropus eugenii	45.40	4.00e-81	294.00
IUUC-Mor-057264	Magnaporthe oryzae	57.52	0.00e+00	909.00
IUUC-Mpo-057538	Magnaporthe poae	57.28	0.00e+00	935.00
IUUC-Mtr-058310	Medicago truncatula	53.06	0.00e+00	913.00
IUUC-Mla-058937	Melampsora laricipopulina	75.76	0.00e+00	1291.00
IUUC-Mga-059875	Meleagris gallopavo	54.42	0.00e+00	937.00
IUUC-Mvi-060240	Microbotryum violaceum	71.52	0.00e+00	1238.00
IUUC-Mmr-061261	Microcebus murinus	54.55	0.00e+00	938.00
IUUC-Mdo-062076	Monodelphis domestica	54.92	0.00e+00	944.00
IUUC-Mmu-063324	Mus musculus	54.67	0.00e+00	941.00
IUUC-Mac-064636	Musa acuminata	51.82	0.00e+00	893.00
IUUC-Mpu-065961	Mustela putorius furo	54.55	0.00e+00	938.00
IUUC-Mlu-067059	Myotis lucifugus	54.17	0.00e+00	915.00
IUUC-Nfi-068277	Neosartorya fischeri	58.95	0.00e+00	986.00
IUUC-Ncr-068659	Neurospora crassa	55.92	0.00e+00	958.00
IUUC-Nle-069034	Nomascus leucogenys	54.55	0.00e+00	938.00
IUUC-Opr-070334	Ochotona princeps	55.66	0.00e+00	874.00
IUUC-Ont-071563	Oreochromis niloticus	53.42	0.00e+00	926.00
IUUC-Oan-073416	Ornithorhynchus anatinus	54.25	0.00e+00	899.00
IUUC-Ocu-074522	Oryctolagus cuniculus	54.42	0.00e+00	933.00
IUUC-Oba-075760	Oryza barthii	51.04	0.00e+00	875.00
IUUC-Obr-076163	Oryza brachyantha	54.03	0.00e+00	907.00
IUUC-Ogl-077450	Oryza glaberrima	52.02	0.00e+00	903.00
IUUC-Ogu-078994	Oryza glumaepatula	51.04	0.00e+00	874.00
IUUC-Oin-079856	Oryza indica	53.69	0.00e+00	902.00
IUUC-Olo-080731	Oryza longistaminata	51.52	0.00e+00	863.00
IUUC-Ome-081554	Oryza meridionalis	50.37	0.00e+00	831.00
IUUC-Oni-082324	Oryza nivara	51.04	0.00e+00	874.00
IUUC-Opu-083400	Oryza punctata	52.45	0.00e+00	889.00
IUUC-Oru-085196	Oryza rufipogon	52.58	0.00e+00	877.00
IUUC-Osa-086026	Oryza sativa	52.14	0.00e+00	904.00
IUUC-Ola-087245	Oryzias latipes	53.18	0.00e+00	926.00
IUUC-Olu-087655	Ostreococcus lucimarinus	51.70	0.00e+00	906.00
IUUC-Oga-088163	Otolemur garnettii	53.17	0.00e+00	895.00
IUUC-Oar-089842	Ovis aries	54.67	0.00e+00	939.00
IUUC-Ptr-090501	Pan troglodytes	54.55	0.00e+00	938.00
IUUC-Pan-092011	Papio anubis	54.55	0.00e+00	939.00
IUUC-Psi-093308	Pelodiscus sinensis	54.55	0.00e+00	939.00
IUUC-Pma-094695	Petromyzon marinus	52.19	0.00e+00	849.00
IUUC-Pno-094785	Phaeosphaeria nodorum	61.15	1.00e-107	382.00
IUUC-Ppa-095911	Physcomitrella patens	52.70	0.00e+00	908.00
IUUC-Pfo-096587	Poecilia formosa	53.06	0.00e+00	927.00
IUUC-Pab-097926	Pongo abelii	53.10	0.00e+00	873.00
IUUC-Pop-099634	Populus trichocarpa	53.67	0.00e+00	914.00
IUUC-Pca-100965	Procavia capensis	53.42	0.00e+00	902.00
IUUC-Ppe-101470	Prunus persica	54.09	0.00e+00	922.00
IUUC-Pva-102451	Pteropus vampyrus	52.63	0.00e+00	743.00
IUUC-Pgr-103453	Puccinia graminis	97.12	0.00e+00	1665.00
IUUC-Pte-104274	Pyrenophora teres	55.84	0.00e+00	963.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	55.39	0.00e+00	916.00
IUUC-Rno-105979	Rattus norvegicus	48.17	0.00e+00	710.00
IUUC-Sce-106269	Saccharomyces cerevisiae	49.08	0.00e+00	806.00
IUUC-Sha-106905	Sarcophilus harrisii	54.92	0.00e+00	944.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	49.49	0.00e+00	843.00
IUUC-Spo-108299	Schizosaccharomyces pombe	50.25	0.00e+00	863.00
IUUC-Smo-108828	Selaginella moellendorffii	51.53	0.00e+00	898.00
IUUC-Sit-110239	Setaria italica	52.88	0.00e+00	914.00
IUUC-Sly-111775	Solanum lycopersicum	52.74	0.00e+00	901.00
IUUC-Stu-112906	Solanum tuberosum	52.31	0.00e+00	821.00
IUUC-Sar-113472	Sorex araneus	51.38	0.00e+00	678.00
IUUC-Sbi-113801	Sorghum bicolor	53.42	0.00e+00	904.00
IUUC-Sre-115040	Sporisorium reilianum	65.28	0.00e+00	1134.00
IUUC-Ssc-115593	Sus scrofa	54.42	0.00e+00	936.00
IUUC-Tgu-117239	Taeniopygia guttata	53.84	0.00e+00	941.00
IUUC-Tru-118025	Takifugu rubripes	52.50	0.00e+00	924.00
IUUC-Tsy-118824	Tarsius syrichta	51.83	0.00e+00	692.00
IUUC-Tni-120142	Tetraodon nigroviridis	53.18	0.00e+00	920.00
IUUC-Tca-121613	Theobroma cacao	53.85	0.00e+00	919.00
IUUC-Tre-122072	Trichoderma reesei	55.76	0.00e+00	943.00
IUUC-Tvi-122546	Trichoderma virens	55.68	0.00e+00	942.00
IUUC-Tae-125395	Triticum aestivum	52.39	0.00e+00	904.00
IUUC-Tur-126283	Triticum urartu	46.14	0.00e+00	766.00
IUUC-Tme-127041	Tuber melanosporum	58.68	0.00e+00	999.00
IUUC-Tbe-127770	Tupaia belangeri	55.19	0.00e+00	786.00
IUUC-Ttr-129294	Tursiops truncatus	54.42	0.00e+00	935.00
IUUC-Uma-129351	Ustilago maydis	64.30	0.00e+00	1137.00
IUUC-Vda-129716	Verticillium dahliae	58.14	0.00e+00	988.00
IUUC-Vpa-130037	Vicugna pacos	42.63	3.00e-102	364.00
IUUC-Vvi-131689	Vitis vinifera	53.96	0.00e+00	911.00
IUUC-Xtr-132633	Xenopus tropicalis	55.17	0.00e+00	946.00
IUUC-Xma-133347	Xiphophorus maculatus	53.18	0.00e+00	929.00
IUUC-Yli-134455	Yarrowia lipolytica	50.98	0.00e+00	852.00
IUUC-Zma-135867	Zea mays	54.03	0.00e+00	929.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence