• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Zma-135867
UUCD1 version UUC-ZeM-00796
Ensembl Protein ID Zm00001d053609_T011
UniProt Accession A0A1D6QQN9; A0A1D6QQN9_MAIZE
Genbank Protein ID AQK59833.1
Protein Name Coatomer subunit beta'
Genbank Nucleotide ID CM000780
Gene Name ZEAMMB73_Zm00001d053609
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d053609 Zm00001d053609_T010 Zm00001d053609_T010
Zm00001d053609 Zm00001d053609_T032 Zm00001d053609_T032
Zm00001d053609 Zm00001d053609_T033 Zm00001d053609_T033
Zm00001d053609 Zm00001d053609_T017 Zm00001d053609_T017
Zm00001d053609 Zm00001d053609_T073 Zm00001d053609_T073
Zm00001d053609 Zm00001d053609_T044 Zm00001d053609_T044
Zm00001d053609 Zm00001d053609_T069 Zm00001d053609_T069
Zm00001d053609 Zm00001d053609_T020 Zm00001d053609_T020
Zm00001d053609 Zm00001d053609_T042 Zm00001d053609_T042
Zm00001d053609 Zm00001d053609_T076 Zm00001d053609_T076
Zm00001d053609 Zm00001d053609_T026 Zm00001d053609_T026
Zm00001d053609 Zm00001d053609_T011 Zm00001d053609_T011
Zm00001d053609 Zm00001d053609_T001 Zm00001d053609_T001
Zm00001d053609 Zm00001d053609_T043 Zm00001d053609_T043
Zm00001d053609 Zm00001d053609_T030 Zm00001d053609_T030
Zm00001d053609 Zm00001d053609_T015 Zm00001d053609_T015
Zm00001d053609 Zm00001d053609_T022 Zm00001d053609_T022
Zm00001d053609 Zm00001d053609_T035 Zm00001d053609_T035
Zm00001d053609 Zm00001d053609_T005 Zm00001d053609_T005
Zm00001d053609 Zm00001d053609_T036 Zm00001d053609_T036
Zm00001d053609 Zm00001d053609_T037 Zm00001d053609_T037
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.40e-33 113.8 183 224
UBD/Beta-Prp 3.00e-66 225.6 14 288
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 183  GHSKGVNCVDYftgGDrPYLITGSDDQTAKVWDYQTKSCVQT 224
           8********966*9778*******************999986 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           +++++++v+ +p +++++++ ++g++ vw+++t+++++s++  + +v++ kf+ ++++ v g++D++i+v++++t + v ++++h+d+++
   Q: 14   RSERVKSVDLHPTEPWILSSLYSGSVCVWNYQTQTMVKSFEVTDLPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIR 103
           5678999*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           +++++p++ +++s s+d  i++wd+++g++  ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl g h + v++++
   Q: 104  CVAVHPTQPFVISSSDDMLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWSLGSPDPNFTLDG-HSKGVNCVD 192
           *****************************9999**********************************************9.********* PP
   S: 188  ..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsf 275
                ++++l++gs+d+t k+wd+qt++cv+tl+gh  nv+ v f+p+  ++++gs+Dg++r+W +++  l +tl++  ++v++  +++ 
   Q: 193  yfTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKG 282
           7445566****************************************************************************9998666 PP
   S: 276  gdnvlv 281
           +++v++
   Q: 283  SRRVVI 288
           666654 PP
   
Organism Zea mays
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
Protein Sequence
(Fasta)
MPLRLDIKRK LAQRSERVKS VDLHPTEPWI LSSLYSGSVC VWNYQTQTMV KSFEVTDLPV 60
RSAKFIARKQ WVVAGADDMF IRVYNYNTMD KVKVFEAHTD YIRCVAVHPT QPFVISSSDD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Zma-135867|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCTACACTC CCGTCTCCAC CTCGTTTCCC CCGCAGGCCC GCACTCGCAA ATCTCCTCCC 60
CGCGCGGCGC GCCTGCACCT CCCGGTCCGG CGAGAGGCCA CCGCCCGCGC GGCCGCGCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Zma-135867|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030663--C:COPI-coated vesicle membrane
GO:0000139--C:Golgi membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-003090 Amborella trichopoda 78.13 0.00e+00 1481.00
IUUC-Ath-007635 Arabidopsis thaliana 79.78 0.00e+00 1512.00
IUUC-Ago-007914 Ashbya gossypii 46.05 0.00e+00 718.00
IUUC-Acl-008237 Aspergillus clavatus 53.24 0.00e+00 923.00
IUUC-Afl-008535 Aspergillus flavus 53.94 0.00e+00 870.00
IUUC-Afu-008845 Aspergillus fumigatus 51.72 0.00e+00 910.00
IUUC-Ani-009135 Aspergillus nidulans 54.92 0.00e+00 901.00
IUUC-Ang-009654 Aspergillus niger 56.76 0.00e+00 831.00
IUUC-Ate-010355 Aspergillus terreus 53.29 0.00e+00 895.00
IUUC-Ame-010922 Astyanax mexicanus 57.23 0.00e+00 964.00
IUUC-Bgr-012249 Blumeria graminis 53.60 0.00e+00 892.00
IUUC-Bta-013579 Bos taurus 62.94 0.00e+00 976.00
IUUC-Bci-013866 Botrytis cinerea 51.66 0.00e+00 900.00
IUUC-Bol-016271 Brassica oleracea 80.28 0.00e+00 1526.00
IUUC-Bra-017758 Brassica rapa 78.20 0.00e+00 1503.00
IUUC-Csa-023383 Chlorocebus sabaeus 67.02 0.00e+00 850.00
IUUC-Cho-024454 Choloepus hoffmanni 60.24 0.00e+00 941.00
IUUC-Cin-025681 Ciona intestinalis 57.41 0.00e+00 997.00
IUUC-Csv-026012 Ciona savignyi 58.81 0.00e+00 978.00
IUUC-Cgl-026649 Colletotrichum gloeosporioides 49.57 0.00e+00 802.00
IUUC-Cne-026986 Cryptococcus neoformans 49.16 0.00e+00 865.00
IUUC-Dre-027846 Danio rerio 63.46 0.00e+00 1114.00
IUUC-Dor-030462 Dipodomys ordii 60.57 0.00e+00 863.00
IUUC-Dse-031268 Dothistroma septosporum 52.55 0.00e+00 898.00
IUUC-Ete-033166 Echinops telfairi 59.64 0.00e+00 717.00
IUUC-Fox-037711 Fusarium oxysporum 53.93 0.00e+00 855.00
IUUC-Fso-038268 Fusarium solani 52.54 0.00e+00 860.00
IUUC-Ggr-039863 Gaeumannomyces graminis 53.69 0.00e+00 883.00
IUUC-Gac-041733 Gasterosteus aculeatus 62.72 0.00e+00 1079.00
IUUC-Gma-044333 Glycine max 83.79 0.00e+00 1578.00
IUUC-Kpa-049265 Komagataella pastoris 50.56 0.00e+00 851.00
IUUC-Lch-050473 Latimeria chalumnae 62.01 0.00e+00 1120.00
IUUC-Loc-052675 Lepisosteus oculatus 61.88 0.00e+00 1118.00
IUUC-Lma-053218 Leptosphaeria maculans 52.45 0.00e+00 872.00
IUUC-Mor-057264 Magnaporthe oryzae 53.50 0.00e+00 870.00
IUUC-Mpo-057538 Magnaporthe poae 53.32 0.00e+00 887.00
IUUC-Mtr-058618 Medicago truncatula 83.77 0.00e+00 1551.00
IUUC-Nfi-068277 Neosartorya fischeri 52.23 0.00e+00 900.00
IUUC-Ncr-068659 Neurospora crassa 53.01 0.00e+00 898.00
IUUC-Opr-070334 Ochotona princeps 63.91 0.00e+00 1016.00
IUUC-Obr-076163 Oryza brachyantha 89.76 0.00e+00 1669.00
IUUC-Olu-087655 Ostreococcus lucimarinus 66.75 0.00e+00 1145.00
IUUC-Pva-102451 Pteropus vampyrus 59.37 0.00e+00 856.00
IUUC-Pgr-103453 Puccinia graminis 53.48 0.00e+00 917.00
IUUC-Ptt-103868 Puccinia triticina 53.72 0.00e+00 917.00
IUUC-Pte-104274 Pyrenophora teres 53.36 0.00e+00 900.00
IUUC-Pyt-104794 Pyrenophora triticirepentis 51.22 0.00e+00 848.00
IUUC-Rno-105979 Rattus norvegicus 53.98 0.00e+00 816.00
IUUC-Sce-106269 Saccharomyces cerevisiae 47.10 0.00e+00 754.00
IUUC-Spo-108299 Schizosaccharomyces pombe 46.84 0.00e+00 801.00
IUUC-Sar-113472 Sorex araneus 57.42 0.00e+00 764.00
IUUC-Sbi-113801 Sorghum bicolor 97.26 0.00e+00 1759.00
IUUC-Tru-118025 Takifugu rubripes 62.52 0.00e+00 1109.00
IUUC-Tsy-118824 Tarsius syrichta 59.52 0.00e+00 801.00
IUUC-Tre-122072 Trichoderma reesei 52.68 0.00e+00 882.00
IUUC-Tvi-122546 Trichoderma virens 52.28 0.00e+00 865.00
IUUC-Tae-125385 Triticum aestivum 90.49 0.00e+00 1657.00
IUUC-Tme-127041 Tuber melanosporum 53.50 0.00e+00 913.00
IUUC-Vda-129716 Verticillium dahliae 54.49 0.00e+00 921.00
IUUC-Vvi-131689 Vitis vinifera 86.61 0.00e+00 1555.00
IUUC-Xtr-132633 Xenopus tropicalis 63.08 0.00e+00 1120.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved