iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126403

Ensembl Protein ID

TRIUR3_33325-P1

UniProt Accession

M7ZFF8; M7ZFF8_TRIUA

Genbank Protein ID

EMS58812.1

Protein Name

WD repeat-containing protein 13

Genbank Nucleotide ID

KD127910

Gene Name

TRIUR3_33325

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_33325	TRIUR3_33325-T1	TRIUR3_33325-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-15	56.4	163	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ ++t+++f s+  +++s+s D+t++vW++++g++++
   Q: 163  GHSKDITDFDFsSNnQYIASCSMDKTVRVWEISKGTCIR 201
           8***********555********************9986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGMLQEWRCN GKGYVAYRNF LLRRIEAASS SAHSTPSNSG RWFASPTTFS EADSWSSIRV 60
CSSSFSHEAC SVPEEDLRSN SGKLSRTMSV SSKQSEPERH VRFAEPAYSF VGMHCIFDNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGATGC TGCAGGAGTG GCGGTGCAAC GGCAAGGGCT ACGTCGCCTA CCGGAACTTC 60
CTCCTCCGCC GTATCGAAGC CGCCTCAAGC AGCGCCCACA GCACGCCCAG CAACAGGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	98.06	0.00e+00	667.00
IUUC-Aml-001761	Ailuropoda melanoleuca	33.33	1.00e-27	116.00
IUUC-Atr-002577	Amborella trichopoda	59.71	9.00e-118	416.00
IUUC-Aca-004423	Anolis carolinensis	32.64	6.00e-26	110.00
IUUC-Aly-005453	Arabidopsis lyrata	55.56	5.00e-100	357.00
IUUC-Ath-007256	Arabidopsis thaliana	55.56	8.00e-100	356.00
IUUC-Ame-010600	Astyanax mexicanus	34.52	1.00e-25	110.00
IUUC-Bta-013511	Bos taurus	33.33	1.00e-27	116.00
IUUC-Bdi-014322	Brachypodium distachyon	83.04	1.00e-153	535.00
IUUC-Bol-015992	Brassica oleracea	56.25	2.00e-100	358.00
IUUC-Bra-017399	Brassica rapa	55.52	2.00e-99	355.00
IUUC-Cja-019508	Callithrix jacchus	33.84	8.00e-28	117.00
IUUC-Cfa-020273	Canis familiaris	33.84	9.00e-28	117.00
IUUC-Cpo-022002	Cavia porcellus	32.83	1.00e-27	116.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	25.29	3.00e-13	68.90
IUUC-Csa-023862	Chlorocebus sabaeus	33.33	9.00e-28	117.00
IUUC-Cin-025687	Ciona intestinalis	32.25	5.00e-35	141.00
IUUC-Csv-025992	Ciona savignyi	35.95	3.00e-34	138.00
IUUC-Dre-028697	Danio rerio	34.52	1.00e-26	113.00
IUUC-Dno-029208	Dasypus novemcinctus	33.33	1.00e-27	116.00
IUUC-Eca-033362	Equus caballus	33.33	6.00e-28	117.00
IUUC-Eeu-034599	Erinaceus europaeus	33.15	2.00e-23	102.00
IUUC-Fca-035874	Felis catus	33.33	1.00e-27	116.00
IUUC-Gmo-039176	Gadus morhua	35.53	3.00e-27	115.00
IUUC-Gga-040458	Gallus gallus	38.84	6.00e-20	89.00
IUUC-Gac-041802	Gasterosteus aculeatus	33.72	7.00e-29	120.00
IUUC-Gma-043787	Glycine max	56.94	4.00e-103	367.00
IUUC-Ggo-045546	Gorilla gorilla	33.84	4.00e-28	118.00
IUUC-Hsa-046407	Homo sapiens	33.84	4.00e-28	118.00
IUUC-Hvu-047726	Hordeum vulgare	86.55	3.00e-160	556.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	33.33	1.00e-27	116.00
IUUC-Lpe-051374	Leersia perrieri	76.32	3.00e-138	484.00
IUUC-Loc-052403	Lepisosteus oculatus	35.03	6.00e-26	111.00
IUUC-Laf-053721	Loxodonta africana	33.33	1.00e-27	116.00
IUUC-Mcc-055449	Macaca mulatta	33.33	1.00e-27	117.00
IUUC-Meu-056487	Macropus eugenii	32.64	2.00e-25	108.00
IUUC-Mtr-058659	Medicago truncatula	53.12	5.00e-100	357.00
IUUC-Mmr-061406	Microcebus murinus	33.33	2.00e-27	115.00
IUUC-Mdo-062331	Monodelphis domestica	32.64	1.00e-25	110.00
IUUC-Mmu-064001	Mus musculus	33.33	1.00e-27	116.00
IUUC-Mac-064934	Musa acuminata	63.79	8.00e-116	409.00
IUUC-Mpu-065871	Mustela putorius furo	33.33	1.00e-27	116.00
IUUC-Mlu-067463	Myotis lucifugus	33.84	1.00e-26	113.00
IUUC-Nle-070136	Nomascus leucogenys	33.33	8.00e-28	117.00
IUUC-Opr-070913	Ochotona princeps	32.49	3.00e-25	108.00
IUUC-Ont-071347	Oreochromis niloticus	33.72	2.00e-28	119.00
IUUC-Oan-073527	Ornithorhynchus anatinus	33.68	9.00e-24	103.00
IUUC-Ocu-074829	Oryctolagus cuniculus	32.83	3.00e-27	115.00
IUUC-Oba-075666	Oryza barthii	77.55	5.00e-144	503.00
IUUC-Obr-076413	Oryza brachyantha	74.42	2.00e-136	478.00
IUUC-Ogl-076998	Oryza glaberrima	77.55	7.00e-144	502.00
IUUC-Ogu-078287	Oryza glumaepatula	77.55	7.00e-144	502.00
IUUC-Oin-079359	Oryza indica	77.26	7.00e-144	502.00
IUUC-Olo-080438	Oryza longistaminata	82.81	1.00e-129	455.00
IUUC-Ome-081328	Oryza meridionalis	76.97	9.00e-148	515.00
IUUC-Oni-082574	Oryza nivara	77.55	5.00e-144	503.00
IUUC-Opu-083376	Oryza punctata	71.35	4.00e-121	427.00
IUUC-Oru-085162	Oryza rufipogon	75.22	1.00e-137	482.00
IUUC-Osa-085507	Oryza sativa	75.22	1.00e-137	482.00
IUUC-Ola-087387	Oryzias latipes	34.52	7.00e-25	107.00
IUUC-Oga-088694	Otolemur garnettii	33.33	1.00e-27	116.00
IUUC-Oar-090355	Ovis aries	33.33	1.00e-27	116.00
IUUC-Ptr-091488	Pan troglodytes	34.01	2.00e-28	118.00
IUUC-Pan-092516	Papio anubis	33.33	1.00e-27	117.00
IUUC-Pma-094572	Petromyzon marinus	33.47	3.00e-29	122.00
IUUC-Ppa-096003	Physcomitrella patens	44.99	8.00e-64	236.00
IUUC-Pfo-096819	Poecilia formosa	35.39	3.00e-28	118.00
IUUC-Pab-098373	Pongo abelii	34.34	2.00e-26	112.00
IUUC-Pop-099930	Populus trichocarpa	58.21	6.00e-108	383.00
IUUC-Pca-100248	Procavia capensis	33.33	2.00e-27	116.00
IUUC-Ppe-101592	Prunus persica	56.03	2.00e-102	365.00
IUUC-Pva-102971	Pteropus vampyrus	33.33	1.00e-27	116.00
IUUC-Rno-105386	Rattus norvegicus	33.33	2.00e-27	115.00
IUUC-Sha-107418	Sarcophilus harrisii	32.64	2.00e-25	109.00
IUUC-Smo-108859	Selaginella moellendorffii	42.82	7.00e-69	253.00
IUUC-Sit-109987	Setaria italica	78.89	8.00e-144	502.00
IUUC-Sly-111433	Solanum lycopersicum	66.38	5.00e-86	309.00
IUUC-Stu-112677	Solanum tuberosum	58.31	8.00e-108	383.00
IUUC-Sar-113317	Sorex araneus	39.83	8.00e-20	90.90
IUUC-Sbi-114115	Sorghum bicolor	76.07	3.00e-116	410.00
IUUC-Ssc-115697	Sus scrofa	38.78	2.00e-16	79.00
IUUC-Tru-118749	Takifugu rubripes	33.33	2.00e-28	119.00
IUUC-Tni-119685	Tetraodon nigroviridis	33.72	2.00e-28	119.00
IUUC-Tca-121769	Theobroma cacao	56.53	1.00e-101	362.00
IUUC-Tae-125563	Triticum aestivum	89.44	3.00e-69	253.00
IUUC-Tbe-127245	Tupaia belangeri	29.79	6.00e-10	58.20
IUUC-Ttr-128854	Tursiops truncatus	33.06	2.00e-29	122.00
IUUC-Vvi-131113	Vitis vinifera	59.38	1.00e-106	379.00
IUUC-Xtr-132420	Xenopus tropicalis	35.68	2.00e-27	115.00
IUUC-Xma-134302	Xiphophorus maculatus	32.95	4.00e-28	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence