iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017046

Ensembl Protein ID

Bra017592.1-P

UniProt Accession

M4DM60; M4DM60_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017592	Bra017592.1	Bra017592.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-14	52.1	263	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDlr 31
           gH++ v+c+af   ++  ++l+sG++D+++k+WD  
   Q: 263  GHKAAVSCVAFsqfQEkgRFLISGGNDKSVKIWDCV 298
           8************9444589**************75 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAMAEPRKLR GHKATATCCI ASRDRPGLVV TSGEDGCVCW FDLRCKDVQF TIDVGTEPVS 60
SLCFKTGNED ILYASHGNEI KSFDVHMLSA GSWKPLESYS YNKDEVNQVV CNGRSSFLAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGG CGGAACCAAG GAAGCTGAGA GGCCACAAAG CGACCGCCAC GTGTTGTATA 60
GCTTCTCGTG ACCGGCCCGG ACTTGTTGTC ACTTCCGGCG AGGTCTCTCT AACTGAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13855--LRR_8
PF00400--WD40

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	52.25	6.00e-90	324.00
IUUC-Aml-001203	Ailuropoda melanoleuca	30.67	2.00e-28	119.00
IUUC-Atr-002680	Amborella trichopoda	57.24	5.00e-92	330.00
IUUC-Apl-003656	Anas platyrhynchos	28.87	3.00e-20	92.00
IUUC-Aca-004987	Anolis carolinensis	32.40	7.00e-27	114.00
IUUC-Aly-006254	Arabidopsis lyrata	86.01	5.00e-166	576.00
IUUC-Ath-006632	Arabidopsis thaliana	86.63	6.00e-162	563.00
IUUC-Ame-011032	Astyanax mexicanus	27.57	5.00e-25	108.00
IUUC-Bta-012588	Bos taurus	31.33	2.00e-30	125.00
IUUC-Bdi-014532	Brachypodium distachyon	57.78	8.00e-107	379.00
IUUC-Bol-015542	Brassica oleracea	85.02	0.00e+00	1036.00
IUUC-Cja-019365	Callithrix jacchus	29.36	2.00e-28	119.00
IUUC-Cfa-021090	Canis familiaris	30.67	2.00e-28	119.00
IUUC-Cpo-021517	Cavia porcellus	29.00	4.00e-25	108.00
IUUC-Csa-023041	Chlorocebus sabaeus	31.35	8.00e-28	117.00
IUUC-Cho-024801	Choloepus hoffmanni	29.37	3.00e-27	115.00
IUUC-Dre-028437	Danio rerio	29.63	2.00e-18	86.30
IUUC-Dno-029267	Dasypus novemcinctus	29.24	6.00e-26	111.00
IUUC-Ete-032726	Echinops telfairi	24.32	1.00e-09	57.00
IUUC-Eca-033621	Equus caballus	30.67	2.00e-27	115.00
IUUC-Eeu-034461	Erinaceus europaeus	32.01	1.00e-30	126.00
IUUC-Fca-036410	Felis catus	30.33	7.00e-27	114.00
IUUC-Fal-036676	Ficedula albicollis	29.25	2.00e-23	102.00
IUUC-Gac-041905	Gasterosteus aculeatus	31.89	6.00e-27	114.00
IUUC-Gma-043066	Glycine max	58.33	1.00e-109	389.00
IUUC-Ggo-044881	Gorilla gorilla	28.53	7.00e-28	117.00
IUUC-Hsa-046836	Homo sapiens	28.81	2.00e-28	119.00
IUUC-Hvu-047651	Hordeum vulgare	57.78	3.00e-107	381.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	32.03	2.00e-29	122.00
IUUC-Lch-050406	Latimeria chalumnae	30.59	1.00e-20	93.60
IUUC-Lpe-051023	Leersia perrieri	47.62	5.00e-86	311.00
IUUC-Loc-052878	Lepisosteus oculatus	29.01	4.00e-29	121.00
IUUC-Laf-053547	Loxodonta africana	28.69	5.00e-28	118.00
IUUC-Mcc-054646	Macaca mulatta	30.33	4.00e-27	115.00
IUUC-Meu-056381	Macropus eugenii	29.63	9.00e-26	110.00
IUUC-Mtr-058656	Medicago truncatula	57.10	3.00e-109	387.00
IUUC-Mmr-061601	Microcebus murinus	27.98	3.00e-28	119.00
IUUC-Mdo-062305	Monodelphis domestica	28.81	5.00e-25	108.00
IUUC-Mmu-063213	Mus musculus	30.90	2.00e-27	116.00
IUUC-Mac-064940	Musa acuminata	58.17	9.00e-124	436.00
IUUC-Mpu-066629	Mustela putorius furo	29.49	6.00e-28	117.00
IUUC-Nle-069860	Nomascus leucogenys	28.65	3.00e-28	119.00
IUUC-Opr-071180	Ochotona princeps	31.64	3.00e-21	95.50
IUUC-Ont-071912	Oreochromis niloticus	29.43	6.00e-26	111.00
IUUC-Ocu-074874	Oryctolagus cuniculus	30.67	2.00e-28	119.00
IUUC-Oba-075815	Oryza barthii	45.30	2.00e-80	292.00
IUUC-Obr-076835	Oryza brachyantha	53.55	7.00e-78	283.00
IUUC-Ogu-077977	Oryza glumaepatula	44.48	1.00e-78	286.00
IUUC-Oin-079206	Oryza indica	51.82	4.00e-103	367.00
IUUC-Olo-080621	Oryza longistaminata	45.81	7.00e-82	296.00
IUUC-Ome-081261	Oryza meridionalis	44.82	1.00e-78	286.00
IUUC-Oni-082280	Oryza nivara	52.24	4.00e-35	141.00
IUUC-Opu-083256	Oryza punctata	45.60	8.00e-79	286.00
IUUC-Oru-084531	Oryza rufipogon	41.88	9.00e-70	256.00
IUUC-Osa-085892	Oryza sativa	51.82	4.00e-103	367.00
IUUC-Ola-086701	Oryzias latipes	28.24	2.00e-24	106.00
IUUC-Olu-087593	Ostreococcus lucimarinus	21.85	2.00e-06	46.60
IUUC-Oga-088152	Otolemur garnettii	29.48	3.00e-28	118.00
IUUC-Oar-089681	Ovis aries	30.67	4.00e-29	121.00
IUUC-Ptr-091142	Pan troglodytes	28.81	3.00e-28	119.00
IUUC-Pan-092435	Papio anubis	32.42	1.00e-26	113.00
IUUC-Psi-093255	Pelodiscus sinensis	28.09	1.00e-24	107.00
IUUC-Ppa-095829	Physcomitrella patens	38.84	2.00e-61	229.00
IUUC-Pfo-097339	Poecilia formosa	29.10	2.00e-26	113.00
IUUC-Pab-098274	Pongo abelii	30.33	7.00e-27	114.00
IUUC-Pop-099705	Populus trichocarpa	60.63	2.00e-120	424.00
IUUC-Pca-100451	Procavia capensis	31.54	2.00e-28	119.00
IUUC-Ppe-101220	Prunus persica	63.69	5.00e-133	466.00
IUUC-Pva-102385	Pteropus vampyrus	30.67	1.00e-28	120.00
IUUC-Rno-105765	Rattus norvegicus	31.56	4.00e-28	118.00
IUUC-Sha-106533	Sarcophilus harrisii	30.79	3.00e-27	115.00
IUUC-Smo-109248	Selaginella moellendorffii	38.87	1.00e-64	239.00
IUUC-Sit-110297	Setaria italica	55.93	2.00e-74	271.00
IUUC-Sly-111617	Solanum lycopersicum	58.01	4.00e-116	410.00
IUUC-Stu-112531	Solanum tuberosum	58.84	8.00e-118	416.00
IUUC-Sar-113647	Sorex araneus	29.49	8.00e-27	114.00
IUUC-Sbi-114621	Sorghum bicolor	58.06	7.00e-116	410.00
IUUC-Tgu-116482	Taeniopygia guttata	29.59	2.00e-19	89.70
IUUC-Tru-118622	Takifugu rubripes	28.48	9.00e-23	100.00
IUUC-Tsy-119474	Tarsius syrichta	30.00	5.00e-27	114.00
IUUC-Tni-120250	Tetraodon nigroviridis	25.84	2.00e-15	76.60
IUUC-Tca-121583	Theobroma cacao	64.82	4.00e-140	490.00
IUUC-Tae-123764	Triticum aestivum	57.22	6.00e-107	380.00
IUUC-Tur-126076	Triticum urartu	47.62	1.00e-81	296.00
IUUC-Tbe-127545	Tupaia belangeri	30.69	4.00e-28	118.00
IUUC-Ttr-128497	Tursiops truncatus	27.67	5.00e-28	118.00
IUUC-Vpa-130772	Vicugna pacos	30.33	1.00e-26	113.00
IUUC-Vvi-131632	Vitis vinifera	65.01	3.00e-140	490.00
IUUC-Xma-133432	Xiphophorus maculatus	30.20	3.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence