iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012588

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat-containing protein 53

Genbank Nucleotide ID

DAAA02001689

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000014660.4	ENSBTAT00000019520.4	ENSBTAP00000019520.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-27	94.2	239	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+ +v+ ++f  +  ll++G++Dg+ik+WD+++
   Q: 239  GHSLGVSQVCFlREsYLLLTGGNDGKIKLWDVSS 272
           79999*******66699**************976 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAVKWTGGHS SPILCLNASQ EGLVASGAEG GDLVVWGEDG TLLGHTCFQG AEDVTNVLFS 60
PSCPTKLYAS HGETISILDV RSLKEPLDDF HVNEEEINCL SLNETENLLA SADDSGTIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGCCCGC CGGTGAGGTC ATCGCCAGGC GCCTTGGAGG GAAGCGGGAA GCACAGGTAT 60
GAGGTTGGCG CGGGTGGGTT TCAGGCTGTC CTCCGCCTTT CCCCCTTCTT GATCTAGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	24.44	5.00e-19	89.00
IUUC-Aml-001203	Ailuropoda melanoleuca	86.31	6.00e-170	590.00
IUUC-Atr-002680	Amborella trichopoda	27.83	1.00e-26	113.00
IUUC-Apl-003656	Anas platyrhynchos	65.43	6.00e-98	350.00
IUUC-Aca-004987	Anolis carolinensis	61.02	4.00e-119	421.00
IUUC-Aly-006254	Arabidopsis lyrata	28.93	1.00e-31	130.00
IUUC-Ath-006632	Arabidopsis thaliana	27.95	4.00e-30	125.00
IUUC-Ame-011032	Astyanax mexicanus	55.40	5.00e-86	311.00
IUUC-Bdi-014532	Brachypodium distachyon	28.49	8.00e-30	124.00
IUUC-Bol-015542	Brassica oleracea	27.07	2.00e-23	104.00
IUUC-Bra-017046	Brassica rapa	31.33	5.00e-30	126.00
IUUC-Cja-019365	Callithrix jacchus	83.52	5.00e-174	603.00
IUUC-Cfa-021090	Canis familiaris	85.75	6.00e-171	593.00
IUUC-Cpo-021517	Cavia porcellus	77.99	1.00e-163	568.00
IUUC-Csa-023041	Chlorocebus sabaeus	78.77	1.00e-164	572.00
IUUC-Cho-024801	Choloepus hoffmanni	81.23	1.00e-170	592.00
IUUC-Dre-028437	Danio rerio	45.58	1.00e-81	296.00
IUUC-Dno-029267	Dasypus novemcinctus	82.07	8.00e-173	599.00
IUUC-Ete-032726	Echinops telfairi	66.48	7.00e-134	469.00
IUUC-Eca-033621	Equus caballus	83.10	6.00e-163	566.00
IUUC-Eeu-034461	Erinaceus europaeus	73.74	2.00e-152	531.00
IUUC-Fca-036410	Felis catus	82.96	2.00e-170	591.00
IUUC-Fal-036676	Ficedula albicollis	63.38	1.00e-122	432.00
IUUC-Gmo-039597	Gadus morhua	32.64	8.00e-13	67.80
IUUC-Gga-040760	Gallus gallus	62.44	2.00e-64	238.00
IUUC-Gac-041905	Gasterosteus aculeatus	46.85	2.00e-89	322.00
IUUC-Gma-043066	Glycine max	24.47	2.00e-20	93.20
IUUC-Ggo-044881	Gorilla gorilla	79.05	5.00e-165	573.00
IUUC-Hsa-046836	Homo sapiens	79.05	9.00e-165	572.00
IUUC-Hvu-047651	Hordeum vulgare	26.87	2.00e-27	116.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	81.79	3.00e-170	590.00
IUUC-Lch-050406	Latimeria chalumnae	52.30	1.00e-88	319.00
IUUC-Lpe-051023	Leersia perrieri	24.66	2.00e-12	67.00
IUUC-Loc-052878	Lepisosteus oculatus	51.41	1.00e-96	346.00
IUUC-Laf-053547	Loxodonta africana	81.23	1.00e-164	572.00
IUUC-Mcc-054646	Macaca mulatta	78.49	8.00e-164	569.00
IUUC-Meu-056381	Macropus eugenii	72.63	1.00e-150	525.00
IUUC-Mtr-058656	Medicago truncatula	27.75	1.00e-19	90.90
IUUC-Mmr-061601	Microcebus murinus	80.95	4.00e-170	590.00
IUUC-Mdo-062305	Monodelphis domestica	73.46	1.00e-153	535.00
IUUC-Mmu-063213	Mus musculus	77.93	3.00e-154	537.00
IUUC-Mac-064940	Musa acuminata	26.26	3.00e-32	132.00
IUUC-Mpu-066629	Mustela putorius furo	82.40	3.00e-171	594.00
IUUC-Nle-069860	Nomascus leucogenys	78.77	5.00e-164	570.00
IUUC-Opr-071180	Ochotona princeps	78.31	1.00e-135	476.00
IUUC-Ont-071912	Oreochromis niloticus	45.97	9.00e-94	337.00
IUUC-Ocu-074874	Oryctolagus cuniculus	82.68	7.00e-174	602.00
IUUC-Oba-075815	Oryza barthii	25.07	5.00e-18	85.10
IUUC-Obr-076835	Oryza brachyantha	33.54	5.00e-21	94.70
IUUC-Ogu-077977	Oryza glumaepatula	30.00	3.00e-15	76.30
IUUC-Oin-079206	Oryza indica	27.70	4.00e-24	105.00
IUUC-Olo-080621	Oryza longistaminata	28.72	5.00e-14	72.00
IUUC-Ome-081261	Oryza meridionalis	25.16	4.00e-17	82.00
IUUC-Opu-083256	Oryza punctata	24.86	5.00e-17	82.00
IUUC-Osa-085892	Oryza sativa	27.70	4.00e-24	105.00
IUUC-Ola-086701	Oryzias latipes	45.17	4.00e-89	321.00
IUUC-Oga-088152	Otolemur garnettii	82.30	1.00e-171	595.00
IUUC-Oar-089681	Ovis aries	86.59	2.00e-179	621.00
IUUC-Ptr-091142	Pan troglodytes	79.33	1.00e-165	575.00
IUUC-Pan-092435	Papio anubis	78.49	8.00e-156	543.00
IUUC-Psi-093255	Pelodiscus sinensis	65.44	3.00e-133	468.00
IUUC-Ppa-095829	Physcomitrella patens	28.31	2.00e-32	133.00
IUUC-Pfo-097339	Poecilia formosa	44.59	3.00e-86	311.00
IUUC-Pab-098274	Pongo abelii	79.89	4.00e-159	553.00
IUUC-Pop-099705	Populus trichocarpa	25.95	2.00e-28	119.00
IUUC-Pca-100451	Procavia capensis	80.28	1.00e-168	585.00
IUUC-Ppe-101220	Prunus persica	27.01	3.00e-27	115.00
IUUC-Pva-102385	Pteropus vampyrus	81.84	3.00e-170	590.00
IUUC-Rno-105765	Rattus norvegicus	77.37	2.00e-154	538.00
IUUC-Sha-106533	Sarcophilus harrisii	71.23	3.00e-148	518.00
IUUC-Smo-108698	Selaginella moellendorffii	27.58	1.00e-29	123.00
IUUC-Sit-110297	Setaria italica	27.21	5.00e-24	104.00
IUUC-Sly-111617	Solanum lycopersicum	32.04	7.00e-24	104.00
IUUC-Stu-112531	Solanum tuberosum	31.55	4.00e-23	102.00
IUUC-Sar-113647	Sorex araneus	76.47	4.00e-161	560.00
IUUC-Sbi-114621	Sorghum bicolor	28.30	1.00e-29	124.00
IUUC-Tgu-116482	Taeniopygia guttata	65.07	1.00e-119	422.00
IUUC-Tru-118622	Takifugu rubripes	47.12	3.00e-87	315.00
IUUC-Tsy-119474	Tarsius syrichta	80.73	2.00e-169	588.00
IUUC-Tni-120250	Tetraodon nigroviridis	44.41	4.00e-78	284.00
IUUC-Tca-121583	Theobroma cacao	28.12	1.00e-30	127.00
IUUC-Tae-123764	Triticum aestivum	27.98	1.00e-27	117.00
IUUC-Tur-126076	Triticum urartu	24.30	3.00e-17	82.80
IUUC-Tbe-127545	Tupaia belangeri	79.44	7.00e-163	566.00
IUUC-Ttr-128497	Tursiops truncatus	81.28	3.00e-169	587.00
IUUC-Vpa-130772	Vicugna pacos	83.24	1.00e-168	585.00
IUUC-Vvi-131632	Vitis vinifera	26.77	3.00e-32	132.00
IUUC-Xma-133432	Xiphophorus maculatus	44.09	1.00e-87	316.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence