iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107640

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01173301

Gene Name

NUP43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000017463.1	ENSSHAT00000020756.1	ENSSHAP00000020591.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-18	65.1	261	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++++ ++f  s+ ++l ++s Dg++  WD +t v++ks
   Q: 261  HEAEMWEVHFhpSNpDHLFTCSEDGSLWHWDASTEVPEKS 300
           99999******8778****************999998875 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MEEIFAKFVS QKISKTRWRP VPPGSLQPAE TFVTGSWDNE ENSVSLWCIG DFGNLSSDGG 60
FEGDHQLLCD IKHHGDVMDL QFLDQERIVA ASSTGCVTIF LHHPNNQTLS VSQEWVGAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAATGCA AAGGATGCCT GTAAGAGAGT CCCACCCAGA TGGTTAAAAT AGCAGTTTGA 60
AGCAAAAGGG GAAGGATCAT GAAGACCAAG TAAGGAAACT GTGCTTTCTC TTGTAACTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	90.03	0.00e+00	684.00
IUUC-Atr-002526	Amborella trichopoda	28.92	3.00e-11	62.40
IUUC-Apl-003533	Anas platyrhynchos	73.81	6.00e-140	489.00
IUUC-Aca-004965	Anolis carolinensis	71.65	1.00e-163	569.00
IUUC-Aly-006431	Arabidopsis lyrata	27.40	2.00e-14	73.20
IUUC-Ath-007253	Arabidopsis thaliana	27.54	2.00e-14	73.20
IUUC-Ame-011694	Astyanax mexicanus	64.29	9.00e-123	432.00
IUUC-Bta-013161	Bos taurus	90.81	0.00e+00	718.00
IUUC-Bdi-014758	Brachypodium distachyon	26.14	6.00e-12	64.70
IUUC-Bol-016489	Brassica oleracea	24.73	5.00e-08	53.10
IUUC-Bra-017838	Brassica rapa	24.73	7.00e-09	54.70
IUUC-Cel-018567	Caenorhabditis elegans	29.05	2.00e-10	59.70
IUUC-Cja-020000	Callithrix jacchus	77.32	1.00e-173	602.00
IUUC-Cfa-021112	Canis familiaris	90.81	0.00e+00	723.00
IUUC-Cpo-022095	Cavia porcellus	85.83	0.00e+00	673.00
IUUC-Csa-023460	Chlorocebus sabaeus	90.03	0.00e+00	692.00
IUUC-Cho-024279	Choloepus hoffmanni	88.56	5.00e-169	586.00
IUUC-Cin-025360	Ciona intestinalis	35.05	5.00e-60	224.00
IUUC-Csv-026301	Ciona savignyi	36.81	4.00e-53	201.00
IUUC-Dre-028097	Danio rerio	62.01	2.00e-135	474.00
IUUC-Dno-029131	Dasypus novemcinctus	90.03	0.00e+00	707.00
IUUC-Dor-030496	Dipodomys ordii	77.49	1.00e-174	605.00
IUUC-Dme-031834	Drosophila melanogaster	28.15	3.00e-44	172.00
IUUC-Ete-032448	Echinops telfairi	87.87	1.00e-162	565.00
IUUC-Eca-034409	Equus caballus	89.50	0.00e+00	706.00
IUUC-Eeu-035343	Erinaceus europaeus	76.12	1.00e-153	535.00
IUUC-Fca-036177	Felis catus	90.29	0.00e+00	716.00
IUUC-Fal-037657	Ficedula albicollis	69.03	2.00e-152	531.00
IUUC-Gmo-038946	Gadus morhua	65.53	4.00e-141	493.00
IUUC-Gga-041070	Gallus gallus	72.44	5.00e-158	550.00
IUUC-Gac-042442	Gasterosteus aculeatus	67.02	8.00e-146	509.00
IUUC-Gma-043812	Glycine max	26.09	8.00e-13	67.80
IUUC-Ggo-045223	Gorilla gorilla	89.50	0.00e+00	716.00
IUUC-Hsa-045956	Homo sapiens	89.76	0.00e+00	718.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	91.86	0.00e+00	731.00
IUUC-Lch-050035	Latimeria chalumnae	70.98	2.00e-159	555.00
IUUC-Laf-053404	Loxodonta africana	87.93	0.00e+00	687.00
IUUC-Mcc-055813	Macaca mulatta	90.03	0.00e+00	691.00
IUUC-Meu-056388	Macropus eugenii	81.13	2.00e-169	588.00
IUUC-Mga-060193	Meleagris gallopavo	70.34	1.00e-163	568.00
IUUC-Mmr-060818	Microcebus murinus	91.08	0.00e+00	716.00
IUUC-Mdo-062822	Monodelphis domestica	96.59	0.00e+00	756.00
IUUC-Mmu-064182	Mus musculus	89.24	0.00e+00	707.00
IUUC-Mac-065317	Musa acuminata	30.40	1.00e-09	57.00
IUUC-Mpu-066865	Mustela putorius furo	90.32	0.00e+00	637.00
IUUC-Mlu-067329	Myotis lucifugus	89.76	0.00e+00	674.00
IUUC-Nle-069093	Nomascus leucogenys	90.29	0.00e+00	719.00
IUUC-Opr-070481	Ochotona princeps	81.15	0.00e+00	635.00
IUUC-Ont-072445	Oreochromis niloticus	67.55	3.00e-147	514.00
IUUC-Oan-073029	Ornithorhynchus anatinus	76.90	2.00e-171	595.00
IUUC-Ocu-074275	Oryctolagus cuniculus	89.24	0.00e+00	707.00
IUUC-Ola-086862	Oryzias latipes	61.68	3.00e-133	468.00
IUUC-Oga-088952	Otolemur garnettii	91.05	0.00e+00	719.00
IUUC-Oar-089300	Ovis aries	91.60	0.00e+00	723.00
IUUC-Ptr-091389	Pan troglodytes	90.03	0.00e+00	719.00
IUUC-Pan-092174	Papio anubis	90.29	0.00e+00	694.00
IUUC-Psi-093326	Pelodiscus sinensis	76.32	1.00e-158	551.00
IUUC-Pfo-096331	Poecilia formosa	65.51	2.00e-144	504.00
IUUC-Pab-098306	Pongo abelii	90.29	0.00e+00	719.00
IUUC-Pop-099166	Populus trichocarpa	26.27	2.00e-12	66.60
IUUC-Pca-100455	Procavia capensis	85.33	5.00e-75	275.00
IUUC-Ppe-101380	Prunus persica	27.65	3.00e-13	69.30
IUUC-Pva-102578	Pteropus vampyrus	91.08	0.00e+00	689.00
IUUC-Pgr-103555	Puccinia graminis	39.68	4.00e-08	53.90
IUUC-Rno-105146	Rattus norvegicus	89.24	0.00e+00	679.00
IUUC-Sly-111767	Solanum lycopersicum	26.29	2.00e-10	59.70
IUUC-Stu-112515	Solanum tuberosum	26.29	2.00e-10	59.70
IUUC-Sar-113681	Sorex araneus	92.89	7.00e-106	377.00
IUUC-Sbi-113809	Sorghum bicolor	25.79	3.00e-06	45.80
IUUC-Ssc-116129	Sus scrofa	89.76	0.00e+00	690.00
IUUC-Tgu-117456	Taeniopygia guttata	68.08	4.00e-80	290.00
IUUC-Tru-117630	Takifugu rubripes	68.67	3.00e-100	357.00
IUUC-Tsy-119331	Tarsius syrichta	90.55	0.00e+00	719.00
IUUC-Tni-120077	Tetraodon nigroviridis	62.80	3.00e-136	478.00
IUUC-Tca-121814	Theobroma cacao	27.36	1.00e-11	64.30
IUUC-Tae-123605	Triticum aestivum	25.54	2.00e-11	63.50
IUUC-Tbe-127359	Tupaia belangeri	81.75	3.00e-179	620.00
IUUC-Ttr-128461	Tursiops truncatus	91.08	0.00e+00	696.00
IUUC-Vpa-130162	Vicugna pacos	91.08	0.00e+00	691.00
IUUC-Vvi-131114	Vitis vinifera	26.70	3.00e-11	62.80
IUUC-Xtr-132446	Xenopus tropicalis	69.37	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence