iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095717

Ensembl Protein ID

PP1S56_52V6.1

UniProt Accession

A9RJI9; A9RJI9_PHYPA

Genbank Protein ID

EDQ72511.1; EDQ80714.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544945; DS544902

Gene Name

PHYPADRAFT_159452; PHYPADRAFT_209739

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S56_52V6	PP1S56_52V6.1	PP1S56_52V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	4.20e-41	139.8	1	76
ULD/UDP/UBQ/UBQ_PIM	1.60e-27	96.0	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k ++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK LKHKKKKVKL AVLQFYKVDD SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTCCTTTT TCCTTTGGTT TCCGAACTAC GTTCCTTGAC GCCACAGCGG AGCGGGGCGT 60
GCCGATCTGC AGCCATGCAG ATCTTCGTGA AGACCCGTGA GTTGATTGTT TGTCGATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

ppp:PHYPADRAFT_159452; ppp:PHYPADRAFT_209739

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003364	Anas platyrhynchos	75.00	4.00e-49	186.00
IUUC-Aca-005055	Anolis carolinensis	83.12	2.00e-62	230.00
IUUC-Bgr-011984	Blumeria graminis	83.66	1.00e-60	224.00
IUUC-Cpo-021905	Cavia porcellus	82.69	3.00e-55	206.00
IUUC-Cne-026972	Cryptococcus neoformans	62.25	1.00e-41	161.00
IUUC-Fal-037049	Ficedula albicollis	83.77	6.00e-57	212.00
IUUC-Gga-040938	Gallus gallus	83.77	6.00e-57	212.00
IUUC-Laf-054502	Loxodonta africana	79.58	4.00e-46	176.00
IUUC-Mtr-058743	Medicago truncatula	96.13	3.00e-72	263.00
IUUC-Nle-069607	Nomascus leucogenys	80.52	6.00e-54	202.00
IUUC-Opr-070523	Ochotona princeps	82.35	1.00e-53	201.00
IUUC-Ola-086383	Oryzias latipes	83.77	1.00e-56	211.00
IUUC-Olu-087619	Ostreococcus lucimarinus	85.14	5.00e-48	182.00
IUUC-Psi-093901	Pelodiscus sinensis	81.88	1.00e-47	181.00
IUUC-Sit-110462	Setaria italica	94.84	5.00e-68	249.00
IUUC-Tgu-116890	Taeniopygia guttata	83.23	2.00e-55	207.00
IUUC-Tru-118475	Takifugu rubripes	83.77	2.00e-56	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence