iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099207

Ensembl Protein ID

POPTR_0006s13530.1

UniProt Accession

U5GAM4; U5GAM4_POPTR

Genbank Protein ID

ERP59309.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_281820; POPTR_0006s13530g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s13530	POPTR_0006s13530.1	POPTR_0006s13530.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	37.88	4.00e-07	53.10	IUUC-Hsa-046902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIMNANSSSS TSTSTAGAGA ETGANPAGPS QSMATPTSSS TPPATGTGTG TTAAASSDGS 60
GKKVRKPYTI TKSRESWTEE EHDKFLEALQ LFDRDWKKIE DFVGSKTVIQ IRSHAQKYFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCCCATCC AGAGAGAGAG AGAGAGAGAG TTTGCCATTT TTGTGTCCTC TGCACTCACG 60
CACCCACACA GTGACCGTTC TTTTCTGTCA GTCCAACCTC CACAAAGCTG GAAACGGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR009057--Homeobox-like
IPR017930--Myb_dom
IPR006447--Myb_dom_plants
IPR001005--SANT/Myb

PROSITE

PS51294--HTH_MYB

Pfam

PF00249--Myb_DNA-binding

SMART

SM00717--SANT

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005879	Arabidopsis lyrata	57.42	2.00e-63	234.00
IUUC-Ath-006818	Arabidopsis thaliana	55.69	6.00e-61	227.00
IUUC-Bol-015375	Brassica oleracea	65.59	4.00e-63	234.00
IUUC-Bra-017353	Brassica rapa	53.38	3.00e-60	224.00
IUUC-Cre-022774	Chlamydomonas reinhardtii	41.43	1.00e-09	57.00
IUUC-Csa-023482	Chlorocebus sabaeus	37.88	3.00e-08	53.50
IUUC-Cho-024724	Choloepus hoffmanni	40.35	5.00e-07	49.30
IUUC-Cme-027237	Cyanidioschyzon merolae	44.78	3.00e-12	66.60
IUUC-Dre-028234	Danio rerio	39.66	4.00e-08	53.10
IUUC-Gma-043648	Glycine max	78.91	1.00e-118	418.00
IUUC-Ggo-044894	Gorilla gorilla	37.88	3.00e-08	53.90
IUUC-Hsa-046902	Homo sapiens	37.88	3.00e-08	53.90
IUUC-Hvu-047369	Hordeum vulgare	42.31	5.00e-07	47.80
IUUC-Mmr-060949	Microcebus murinus	34.52	4.00e-08	53.10
IUUC-Nle-069917	Nomascus leucogenys	39.39	2.00e-08	54.30
IUUC-Opr-070449	Ochotona princeps	46.51	3.00e-07	50.10
IUUC-Ocu-073867	Oryctolagus cuniculus	41.07	1.00e-07	50.80
IUUC-Ptr-091260	Pan troglodytes	37.88	3.00e-08	53.90
IUUC-Pan-092564	Papio anubis	37.88	4.00e-08	53.50
IUUC-Pma-094538	Petromyzon marinus	32.56	2.00e-04	39.70
IUUC-Pca-100438	Procavia capensis	41.67	2.00e-08	54.30
IUUC-Ppe-101933	Prunus persica	67.35	2.00e-83	300.00
IUUC-Sly-111876	Solanum lycopersicum	53.56	6.00e-62	230.00
IUUC-Stu-112613	Solanum tuberosum	71.84	6.00e-101	359.00
IUUC-Sre-115088	Sporisorium reilianum	33.33	2.00e-03	37.70
IUUC-Vvi-131499	Vitis vinifera	54.26	1.00e-68	252.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence