iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lma-053237

Ensembl Protein ID

CBX92413

UniProt Accession

E4ZM64; E4ZM64_LEPMJ

Genbank Protein ID

CBX92413.1

Protein Name

Protein HIR

Genbank Nucleotide ID

FP929094

Gene Name

LEMA_P051190.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LEMA_P051190.1	CBX92413	CBX92413

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-20	69.6	172	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ v ++ f +  ++++++sdD t+kv+++
   Q: 172  HQSHVKGITFdPAnKYFATASDDRTVKVFRF 202
           9999******9444**************996 PP

Organism

Leptosphaeria maculans

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MHVIKPQWLT HPGELKDFEV YSCDVSPDGS RLVTAAGDGY VRIWSTEAIL NSNNPEYTKP 60
KQLAAVSHHS GTIHAVRFSY NGKYLASGAD DKIVCVYALD KNAPPTHAAF GTNEAPPVEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATGTGA TCAAGCCGCA GTGGTTGACA CACCCGGGTG AGTACACCGA TTGCGACACT 60
GCACATGGAG ACATTGCGCC CCGCGTCCCC CTCACCCAAA ACGACTAGCT AATCATTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	31.97	4.00e-65	241.00
IUUC-Aml-001723	Ailuropoda melanoleuca	35.11	2.00e-59	222.00
IUUC-Atr-003132	Amborella trichopoda	33.72	3.00e-67	248.00
IUUC-Apl-003197	Anas platyrhynchos	31.56	3.00e-60	225.00
IUUC-Aca-004733	Anolis carolinensis	31.66	4.00e-66	244.00
IUUC-Aly-005446	Arabidopsis lyrata	25.49	3.00e-79	288.00
IUUC-Ath-007627	Arabidopsis thaliana	32.78	3.00e-67	248.00
IUUC-Ago-007766	Ashbya gossypii	32.66	2.00e-120	425.00
IUUC-Acl-008104	Aspergillus clavatus	61.41	0.00e+00	1288.00
IUUC-Afl-008591	Aspergillus flavus	59.87	0.00e+00	1247.00
IUUC-Afu-008781	Aspergillus fumigatus	60.00	0.00e+00	1211.00
IUUC-Ani-009272	Aspergillus nidulans	57.09	0.00e+00	1142.00
IUUC-Ang-009655	Aspergillus niger	59.06	0.00e+00	1263.00
IUUC-Aor-010119	Aspergillus oryzae	59.87	0.00e+00	1248.00
IUUC-Ate-010530	Aspergillus terreus	56.76	0.00e+00	1174.00
IUUC-Bgr-012237	Blumeria graminis	56.49	0.00e+00	1113.00
IUUC-Bta-013320	Bos taurus	33.06	3.00e-61	228.00
IUUC-Bci-013795	Botrytis cinerea	58.59	0.00e+00	1189.00
IUUC-Bdi-014075	Brachypodium distachyon	34.34	4.00e-70	258.00
IUUC-Bol-016440	Brassica oleracea	26.14	1.00e-88	320.00
IUUC-Bra-016651	Brassica rapa	31.83	9.00e-68	250.00
IUUC-Cel-018692	Caenorhabditis elegans	24.04	6.00e-28	118.00
IUUC-Cja-018987	Callithrix jacchus	32.81	8.00e-56	210.00
IUUC-Cfa-020132	Canis familiaris	35.11	2.00e-59	222.00
IUUC-Cpo-021484	Cavia porcellus	34.94	1.00e-62	233.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	30.87	3.00e-54	205.00
IUUC-Csa-023081	Chlorocebus sabaeus	32.48	1.00e-63	236.00
IUUC-Cin-025182	Ciona intestinalis	33.92	5.00e-58	218.00
IUUC-Csv-026154	Ciona savignyi	33.33	1.00e-54	206.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	54.38	0.00e+00	1111.00
IUUC-Cne-026891	Cryptococcus neoformans	40.91	8.00e-85	306.00
IUUC-Cme-027349	Cyanidioschyzon merolae	26.68	4.00e-30	125.00
IUUC-Dre-027655	Danio rerio	31.25	2.00e-63	235.00
IUUC-Dno-029557	Dasypus novemcinctus	33.03	4.00e-53	201.00
IUUC-Dor-030687	Dipodomys ordii	31.38	1.00e-48	186.00
IUUC-Dse-031334	Dothistroma septosporum	61.58	0.00e+00	1269.00
IUUC-Dme-031746	Drosophila melanogaster	30.16	1.00e-62	233.00
IUUC-Ete-032384	Echinops telfairi	28.57	1.00e-42	166.00
IUUC-Eca-033430	Equus caballus	32.31	3.00e-60	225.00
IUUC-Fca-036121	Felis catus	35.11	2.00e-59	223.00
IUUC-Fal-036817	Ficedula albicollis	32.04	1.00e-59	223.00
IUUC-Fox-037906	Fusarium oxysporum	60.59	0.00e+00	753.00
IUUC-Fso-038409	Fusarium solani	56.65	0.00e+00	1161.00
IUUC-Gmo-039151	Gadus morhua	33.16	1.00e-61	229.00
IUUC-Ggr-040016	Gaeumannomyces graminis	55.38	0.00e+00	1152.00
IUUC-Gga-040936	Gallus gallus	32.23	2.00e-63	235.00
IUUC-Gac-041405	Gasterosteus aculeatus	32.82	2.00e-58	219.00
IUUC-Gma-042800	Glycine max	26.39	5.00e-79	287.00
IUUC-Ggo-045430	Gorilla gorilla	32.48	2.00e-63	236.00
IUUC-Hsa-046442	Homo sapiens	32.48	2.00e-63	236.00
IUUC-Hvu-047587	Hordeum vulgare	33.85	3.00e-59	221.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	33.12	1.00e-43	168.00
IUUC-Kpa-049145	Komagataella pastoris	32.69	7.00e-119	420.00
IUUC-Lch-050474	Latimeria chalumnae	31.67	2.00e-62	232.00
IUUC-Lpe-051209	Leersia perrieri	28.18	7.00e-84	303.00
IUUC-Loc-052119	Lepisosteus oculatus	30.23	4.00e-60	224.00
IUUC-Laf-053718	Loxodonta africana	32.68	7.00e-64	237.00
IUUC-Mcc-055621	Macaca mulatta	32.74	2.00e-55	209.00
IUUC-Meu-055914	Macropus eugenii	31.21	4.00e-40	158.00
IUUC-Mor-057090	Magnaporthe oryzae	55.02	0.00e+00	1130.00
IUUC-Mpo-057364	Magnaporthe poae	54.84	0.00e+00	1147.00
IUUC-Mtr-058691	Medicago truncatula	33.81	2.00e-67	249.00
IUUC-Mla-058914	Melampsora laricipopulina	29.11	1.00e-88	319.00
IUUC-Mga-060181	Meleagris gallopavo	32.41	5.00e-61	228.00
IUUC-Mvi-060432	Microbotryum violaceum	35.04	3.00e-67	248.00
IUUC-Mmr-060871	Microcebus murinus	32.87	4.00e-64	238.00
IUUC-Mdo-062301	Monodelphis domestica	32.48	2.00e-64	239.00
IUUC-Mmu-063888	Mus musculus	32.68	1.00e-64	239.00
IUUC-Mac-065137	Musa acuminata	33.08	5.00e-64	237.00
IUUC-Mpu-066732	Mustela putorius furo	35.11	3.00e-59	222.00
IUUC-Mlu-067542	Myotis lucifugus	33.13	4.00e-62	231.00
IUUC-Nfi-068396	Neosartorya fischeri	60.48	0.00e+00	1219.00
IUUC-Ncr-068842	Neurospora crassa	55.42	0.00e+00	1143.00
IUUC-Nle-070156	Nomascus leucogenys	32.68	4.00e-64	238.00
IUUC-Opr-070808	Ochotona princeps	36.76	3.00e-40	158.00
IUUC-Ont-072105	Oreochromis niloticus	31.16	2.00e-59	223.00
IUUC-Ocu-074962	Oryctolagus cuniculus	32.92	1.00e-61	229.00
IUUC-Oba-075178	Oryza barthii	34.20	1.00e-71	263.00
IUUC-Obr-076399	Oryza brachyantha	31.65	1.00e-71	263.00
IUUC-Ogu-078797	Oryza glumaepatula	34.20	1.00e-71	263.00
IUUC-Oin-080085	Oryza indica	33.51	2.00e-60	226.00
IUUC-Olo-081048	Oryza longistaminata	33.63	6.00e-50	191.00
IUUC-Ome-081324	Oryza meridionalis	34.20	1.00e-71	263.00
IUUC-Oni-082548	Oryza nivara	34.12	9.00e-72	263.00
IUUC-Opu-084008	Oryza punctata	35.06	4.00e-72	264.00
IUUC-Oru-084339	Oryza rufipogon	34.20	1.00e-71	263.00
IUUC-Osa-085782	Oryza sativa	34.20	1.00e-71	263.00
IUUC-Ola-087302	Oryzias latipes	30.20	5.00e-57	214.00
IUUC-Olu-087611	Ostreococcus lucimarinus	36.56	2.00e-75	275.00
IUUC-Oga-087935	Otolemur garnettii	32.86	2.00e-60	226.00
IUUC-Oar-089229	Ovis aries	29.59	4.00e-48	185.00
IUUC-Ptr-090715	Pan troglodytes	32.48	1.00e-63	236.00
IUUC-Pan-092318	Papio anubis	32.52	2.00e-60	226.00
IUUC-Psi-094053	Pelodiscus sinensis	34.75	3.00e-57	215.00
IUUC-Pno-094985	Phaeosphaeria nodorum	75.19	0.00e+00	1544.00
IUUC-Ppa-095499	Physcomitrella patens	33.56	1.00e-67	249.00
IUUC-Pfo-096857	Poecilia formosa	33.33	6.00e-57	214.00
IUUC-Pab-098047	Pongo abelii	32.48	1.00e-63	236.00
IUUC-Pop-099587	Populus trichocarpa	33.90	4.00e-66	244.00
IUUC-Pca-100558	Procavia capensis	34.11	1.00e-31	130.00
IUUC-Ppe-101261	Prunus persica	33.26	3.00e-67	248.00
IUUC-Pva-102683	Pteropus vampyrus	32.87	1.00e-62	233.00
IUUC-Pgr-103660	Puccinia graminis	38.00	6.00e-72	263.00
IUUC-Ptt-103900	Puccinia triticina	38.10	6.00e-72	263.00
IUUC-Pte-104209	Pyrenophora teres	84.39	0.00e+00	1806.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	84.13	0.00e+00	1778.00
IUUC-Rno-105566	Rattus norvegicus	32.68	5.00e-64	238.00
IUUC-Sce-106291	Saccharomyces cerevisiae	35.49	3.00e-124	437.00
IUUC-Sha-107514	Sarcophilus harrisii	31.30	1.00e-49	190.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	37.68	1.00e-166	578.00
IUUC-Spo-108162	Schizosaccharomyces pombe	36.26	4.00e-167	580.00
IUUC-Ssl-108629	Sclerotinia sclerotiorum	50.58	0.00e+00	702.00
IUUC-Smo-109186	Selaginella moellendorffii	33.01	2.00e-66	246.00
IUUC-Sit-110730	Setaria italica	34.04	3.00e-67	248.00
IUUC-Sly-111547	Solanum lycopersicum	32.44	3.00e-64	238.00
IUUC-Stu-112705	Solanum tuberosum	32.35	1.00e-63	236.00
IUUC-Sar-113222	Sorex araneus	30.94	1.00e-54	206.00
IUUC-Sbi-114528	Sorghum bicolor	34.27	9.00e-71	260.00
IUUC-Sre-115061	Sporisorium reilianum	33.80	7.00e-81	293.00
IUUC-Ssc-116364	Sus scrofa	32.72	4.00e-61	228.00
IUUC-Tgu-116645	Taeniopygia guttata	32.31	7.00e-60	224.00
IUUC-Tru-117590	Takifugu rubripes	31.30	1.00e-62	233.00
IUUC-Tsy-119212	Tarsius syrichta	33.83	3.00e-50	192.00
IUUC-Tni-119915	Tetraodon nigroviridis	31.50	9.00e-62	230.00
IUUC-Tca-121765	Theobroma cacao	33.02	1.00e-65	243.00
IUUC-Tre-121887	Trichoderma reesei	54.06	0.00e+00	1083.00
IUUC-Tvi-122262	Trichoderma virens	53.92	0.00e+00	1075.00
IUUC-Tae-124502	Triticum aestivum	29.74	9.00e-37	146.00
IUUC-Tur-126483	Triticum urartu	34.42	4.00e-70	258.00
IUUC-Tme-127202	Tuber melanosporum	47.73	0.00e+00	878.00
IUUC-Tbe-127350	Tupaia belangeri	33.21	1.00e-32	133.00
IUUC-Ttr-129077	Tursiops truncatus	30.18	3.00e-52	198.00
IUUC-Uma-129465	Ustilago maydis	34.39	6.00e-82	297.00
IUUC-Vda-129844	Verticillium dahliae	50.67	0.00e+00	951.00
IUUC-Vvi-131397	Vitis vinifera	33.26	1.00e-65	243.00
IUUC-Xtr-132057	Xenopus tropicalis	31.69	1.00e-62	233.00
IUUC-Xma-134139	Xiphophorus maculatus	34.65	5.00e-50	190.00
IUUC-Yli-134424	Yarrowia lipolytica	50.23	4.00e-122	431.00
IUUC-Zma-135839	Zea mays	26.35	1.00e-93	336.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence