• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Sce-106432
Ensembl Protein ID YGR252W
UniProt Accession Q03330; D6VV32; Q6B165; GCN5_YEAST
Genbank Protein ID CAA48602.1; CAA97281.1; AAT93234.1; CAA67614.1; DAA08343.1
Protein Name Histone acetyltransferase GCN5
Genbank Nucleotide ID X68628; Z73037; AY693215; X99228; BK006941
Gene Name GCN5; ADA4; SWI9; YGR252W
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YGR252W YGR252W YGR252W
Annotation
mRNA Expression
GEOFFGED
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
IIDiRefIndexHINTMentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMdbPAFBioGRID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/Other 47.06 5.00e-83 306.00 IUUC-Hsa-046970
Active Site
Position(s) Description Evidence
173 Proton donor/acceptor {ECO:0000250|UniProtKB:Q92830}
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description



     Acetylates histone H2B to form H2BK11ac and H2BK16ac, histone H3 to form H3K9ac, H3K14ac, H3K18ac, H3K23ac, H3K27ac and H3K36ac, with a lower preference histone H4 to form H4K8ac and H4K16ac, and contributes to H2A.Z acetylation. Acetylation of histones gives a specific tag for epigenetic transcription activation. Operates in concert with certain DNA-binding transcriptional activators such as GCN4 or HAP2/3/4. Its acetyltransferase activity seems to be dependent on the association in different multisubunit complexes. Functions as histone acetyltransferase component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction (SPT3, SPT8 and SPT20) and promoter selectivity, interaction with transcription activators (GCN5, ADA2, ADA3 and TRA1), and chromatin modification through histone acetylation (GCN5) and deubiquitination (UBP8). SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA via upstream activating sequences (UASs). SALSA, an altered form of SAGA, may be involved in positive transcriptional regulation. The ADA histone acetyltransferase complex preferentially acetylates nucleosomal histones H3 (to form H3K14ac and H3K18ac) and H2B, leading to transcription regulation. SLIK is proposed to have partly overlapping functions with SAGA. It preferentially acetylates methylated histone H3, at least after activation at the GAL1-10 locus.
Acetylates histone H2B to form H2BK11ac and H2BK16ac, histone H3 to form H3K9ac, H3K14ac, H3K18ac, H3K23ac, H3K27ac and H3K36ac, with a lower preference histone H4 to form H4K8ac and H4K16ac, and contributes to H2A.Z acetylation. Acetylation of histones gives a specific tag for epigenetic transcription activation. Operates in concert with certain DNA-binding transcriptional activators such as GCN4 or HAP2/3/4. Its acetyltransferase activity seems to be dependent on the association in different multisubunit complexes. Functions as histone acetyltransferase component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction (SPT3, SPT8 and SPT20) and promoter selectivity, interaction with transcription activators (GCN5, ADA2, ADA3 and TRA1), and chromatin modification through histone acetylation (GCN5) and deubiquitination (UBP8). SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA via upstream activating sequences (UASs). SALSA, an altered form of SAGA, may be involved in positive transcriptional regulation. The ADA histone acetyltransferase complex preferentially acetylates nucleosomal histones H3 (to form H3K14ac and H3K18ac) and H2B, leading to transcription regulation. SLIK is proposed to have partly overlapping functions with SAGA. It preferentially acetylates methylated histone H3, at least after activation at the GAL1-10 locus.
Protein Sequence
(Fasta)
MVTKHQIEED HLDGATTDPE VKRVKLENNV EEIQPEQAET NKQEGTDKEN KGKFEKETER 60
IGGSEVVTDV EKGIVKFEFD GVEYTFKERP SVVEENEGKI EFRVVNNDNT KENMMVLTGL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sce-106432|E3,E3 activity/Other|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGTCACAA AACATCAGAT TGAAGAGGAT CACTTGGATG GAGCTACGAC GGATCCCGAA 60
GTTAAACGGG TAAAATTAGA AAACAACGTT GAAGAAATAC AACCTGAGCA GGCTGAGACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sce-106432|E3,E3 activity/Other|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0010--Activator
KW-0012--Acyltransferase
KW-0103--Bromodomain
KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0808--Transferase

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR000182--GNAT_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS51186--GNAT

Pfam

PF00583--Acetyltransf_1
PF00439--Bromodomain

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO

Gene Ontology

GO:0005671--C:Ada2/Gcn5/Ada3 transcription activator complex
GO:0000775--C:chromosome, centromeric region
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0000124--C:SAGA complex
GO:0046695--C:SLIK (SAGA-like) complex
GO:0010484--F:H3 histone acetyltransferase activity
GO:0004402--F:histone acetyltransferase activity
GO:0070577--F:lysine-acetylated histone binding
GO:0003713--F:transcription coactivator activity
GO:0006325--P:chromatin organization
GO:0006338--P:chromatin remodeling
GO:0016573--P:histone acetylation
GO:0032968--P:positive regulation of transcription elongation from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG sce:YGR252W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001599 Ailuropoda melanoleuca 47.21 2.00e-77 281.00
IUUC-Atr-003130 Amborella trichopoda 48.31 2.00e-95 340.00
IUUC-Apl-004026 Anas platyrhynchos 48.39 4.00e-83 300.00
IUUC-Aca-005148 Anolis carolinensis 46.32 6.00e-24 104.00
IUUC-Aly-006486 Arabidopsis lyrata 47.27 6.00e-85 306.00
IUUC-Ath-006763 Arabidopsis thaliana 47.27 2.00e-85 307.00
IUUC-Ago-007819 Ashbya gossypii 79.21 0.00e+00 717.00
IUUC-Acl-008194 Aspergillus clavatus 66.00 9.00e-145 504.00
IUUC-Afl-008546 Aspergillus flavus 65.43 4.00e-144 501.00
IUUC-Afu-009124 Aspergillus fumigatus 66.29 2.00e-145 506.00
IUUC-Ani-009432 Aspergillus nidulans 65.96 1.00e-136 477.00
IUUC-Ang-009824 Aspergillus niger 65.54 2.00e-146 509.00
IUUC-Aor-010076 Aspergillus oryzae 64.27 2.00e-143 499.00
IUUC-Ame-010924 Astyanax mexicanus 49.47 4.00e-25 109.00
IUUC-Bgr-012003 Blumeria graminis 63.48 8.00e-137 478.00
IUUC-Bta-012381 Bos taurus 46.63 4.00e-81 294.00
IUUC-Bci-013974 Botrytis cinerea 61.41 5.00e-136 475.00
IUUC-Bdi-015016 Brachypodium distachyon 46.93 1.00e-92 331.00
IUUC-Bol-015982 Brassica oleracea 39.44 2.00e-09 57.00
IUUC-Bra-017875 Brassica rapa 39.44 4.00e-09 56.20
IUUC-Cel-018633 Caenorhabditis elegans 39.34 8.00e-71 259.00
IUUC-Cja-019375 Callithrix jacchus 47.21 1.00e-77 282.00
IUUC-Cfa-020400 Canis familiaris 47.21 2.00e-77 281.00
IUUC-Cpo-021686 Cavia porcellus 47.80 1.00e-82 299.00
IUUC-Cre-023019 Chlamydomonas reinhardtii 41.22 2.00e-88 317.00
IUUC-Csa-024252 Chlorocebus sabaeus 47.80 6.00e-83 299.00
IUUC-Cho-024635 Choloepus hoffmanni 58.78 5.00e-37 147.00
IUUC-Cin-025450 Ciona intestinalis 43.75 2.00e-21 94.40
IUUC-Csv-026235 Ciona savignyi 34.75 1.00e-20 90.90
IUUC-Cgl-026660 Colletotrichum gloeosporioides 65.91 5.00e-143 498.00
IUUC-Cne-027050 Cryptococcus neoformans 49.34 2.00e-100 358.00
IUUC-Dre-027468 Danio rerio 47.08 1.00e-80 292.00
IUUC-Dno-029306 Dasypus novemcinctus 47.80 4.00e-82 297.00
IUUC-Dor-030465 Dipodomys ordii 36.68 7.00e-41 160.00
IUUC-Dse-031386 Dothistroma septosporum 59.51 7.00e-131 458.00
IUUC-Dme-032140 Drosophila melanogaster 51.02 5.00e-27 115.00
IUUC-Ete-032789 Echinops telfairi 44.21 4.00e-23 103.00
IUUC-Eca-034212 Equus caballus 47.21 1.00e-77 281.00
IUUC-Eeu-034605 Erinaceus europaeus 57.25 6.00e-36 144.00
IUUC-Fca-035972 Felis catus 47.80 2.00e-82 298.00
IUUC-Fal-037223 Ficedula albicollis 48.24 3.00e-82 297.00
IUUC-Fox-037874 Fusarium oxysporum 65.42 2.00e-138 483.00
IUUC-Fso-038286 Fusarium solani 65.91 5.00e-141 491.00
IUUC-Gmo-039102 Gadus morhua 46.38 1.00e-77 282.00
IUUC-Ggr-039925 Gaeumannomyces graminis 58.87 7.00e-133 464.00
IUUC-Gga-041181 Gallus gallus 48.68 2.00e-84 305.00
IUUC-Gac-041887 Gasterosteus aculeatus 45.80 3.00e-77 281.00
IUUC-Gma-043540 Glycine max 48.75 6.00e-95 339.00
IUUC-Ggo-044607 Gorilla gorilla 47.80 6.00e-83 300.00
IUUC-Hsa-046970 Homo sapiens 47.80 6.00e-83 300.00
IUUC-Hvu-047105 Hordeum vulgare 55.61 2.00e-59 220.00
IUUC-Itr-048740 Ictidomys tridecemlineatus 45.26 2.00e-23 103.00
IUUC-Kpa-049146 Komagataella pastoris 76.09 6.00e-171 591.00
IUUC-Lch-049478 Latimeria chalumnae 48.24 3.00e-83 301.00
IUUC-Lpe-051678 Leersia perrieri 48.71 2.00e-82 297.00
IUUC-Loc-052255 Lepisosteus oculatus 45.92 2.00e-81 295.00
IUUC-Laf-054575 Loxodonta africana 47.21 2.00e-77 281.00
IUUC-Mcc-055161 Macaca mulatta 47.80 8.00e-83 299.00
IUUC-Meu-056217 Macropus eugenii 38.55 1.00e-14 74.70
IUUC-Mor-057026 Magnaporthe oryzae 59.32 8.00e-135 471.00
IUUC-Mpo-057590 Magnaporthe poae 59.32 1.00e-132 464.00
IUUC-Mtr-057835 Medicago truncatula 50.58 2.00e-91 327.00
IUUC-Mla-058950 Melampsora laricipopulina 58.19 3.00e-115 405.00
IUUC-Mga-060204 Meleagris gallopavo 45.26 2.00e-22 101.00
IUUC-Mvi-060295 Microbotryum violaceum 60.30 2.00e-127 447.00
IUUC-Mmr-060643 Microcebus murinus 46.63 6.00e-78 283.00
IUUC-Mdo-062732 Monodelphis domestica 48.09 1.00e-82 299.00
IUUC-Mmu-064125 Mus musculus 47.21 5.00e-77 280.00
IUUC-Mac-064798 Musa acuminata 34.62 2.00e-10 60.50
IUUC-Mpu-066371 Mustela putorius furo 47.80 1.00e-82 298.00
IUUC-Mlu-067447 Myotis lucifugus 47.20 9.00e-81 292.00
IUUC-Nfi-068373 Neosartorya fischeri 66.38 2.00e-148 516.00
IUUC-Ncr-068652 Neurospora crassa 65.91 6.00e-143 498.00
IUUC-Nle-069659 Nomascus leucogenys 47.80 6.00e-83 300.00
IUUC-Opr-070324 Ochotona princeps 38.55 1.00e-14 74.70
IUUC-Ont-071244 Oreochromis niloticus 46.92 7.00e-80 290.00
IUUC-Oan-072794 Ornithorhynchus anatinus 48.82 3.00e-83 301.00
IUUC-Ocu-074701 Oryctolagus cuniculus 47.21 2.00e-77 281.00
IUUC-Oba-075479 Oryza barthii 52.52 9.00e-70 255.00
IUUC-Obr-076214 Oryza brachyantha 36.49 3.00e-10 60.10
IUUC-Ogl-076970 Oryza glaberrima 47.90 1.00e-85 308.00
IUUC-Ogu-079017 Oryza glumaepatula 36.11 7.00e-10 58.50
IUUC-Oin-079610 Oryza indica 52.52 9.00e-70 255.00
IUUC-Olo-080777 Oryza longistaminata 36.11 7.00e-10 58.50
IUUC-Ome-081474 Oryza meridionalis 36.11 7.00e-10 58.50
IUUC-Oni-083016 Oryza nivara 48.07 2.00e-85 307.00
IUUC-Opu-083976 Oryza punctata 48.60 8.00e-87 312.00
IUUC-Oru-085067 Oryza rufipogon 36.11 7.00e-10 58.50
IUUC-Osa-085814 Oryza sativa 47.90 1.00e-85 308.00
IUUC-Ola-087071 Oryzias latipes 47.21 2.00e-80 291.00
IUUC-Olu-087711 Ostreococcus lucimarinus 44.32 4.00e-87 312.00
IUUC-Oga-089043 Otolemur garnettii 46.63 3.00e-77 281.00
IUUC-Oar-089893 Ovis aries 47.21 4.00e-82 297.00
IUUC-Ptr-090629 Pan troglodytes 47.80 6.00e-83 300.00
IUUC-Pan-092305 Papio anubis 47.52 2.00e-81 295.00
IUUC-Psi-093574 Pelodiscus sinensis 48.09 7.00e-81 293.00
IUUC-Pma-094160 Petromyzon marinus 45.59 5.00e-81 293.00
IUUC-Ppa-095410 Physcomitrella patens 46.72 3.00e-87 313.00
IUUC-Pfo-097043 Poecilia formosa 47.21 1.00e-80 292.00
IUUC-Pab-098748 Pongo abelii 47.80 8.00e-83 299.00
IUUC-Pop-099371 Populus trichocarpa 35.63 9.00e-09 55.10
IUUC-Pca-100223 Procavia capensis 47.06 7.00e-82 296.00
IUUC-Ppe-101832 Prunus persica 49.30 2.00e-96 343.00
IUUC-Pva-102122 Pteropus vampyrus 47.21 1.00e-77 282.00
IUUC-Pte-104228 Pyrenophora teres 58.64 7.00e-134 468.00
IUUC-Pyt-104702 Pyrenophora triticirepentis 58.64 5.00e-134 468.00
IUUC-Rno-105749 Rattus norvegicus 45.26 1.00e-23 104.00
IUUC-Sha-107338 Sarcophilus harrisii 48.82 2.00e-82 298.00
IUUC-Spo-108273 Schizosaccharomyces pombe 62.30 5.00e-144 501.00
IUUC-Ssl-108545 Sclerotinia sclerotiorum 61.97 2.00e-132 463.00
IUUC-Smo-109385 Selaginella moellendorffii 50.14 3.00e-92 330.00
IUUC-Sit-110222 Setaria italica 48.18 2.00e-86 310.00
IUUC-Sly-111498 Solanum lycopersicum 46.38 1.00e-67 248.00
IUUC-Sar-113574 Sorex araneus 46.92 2.00e-76 278.00
IUUC-Sbi-114471 Sorghum bicolor 48.89 2.00e-88 317.00
IUUC-Sre-114915 Sporisorium reilianum 54.46 4.00e-134 469.00
IUUC-Ssc-116097 Sus scrofa 47.21 2.00e-77 281.00
IUUC-Tgu-116699 Taeniopygia guttata 48.09 2.00e-82 298.00
IUUC-Tru-118001 Takifugu rubripes 46.49 6.00e-79 286.00
IUUC-Tsy-118910 Tarsius syrichta 41.64 3.00e-65 241.00
IUUC-Tni-119684 Tetraodon nigroviridis 46.33 2.00e-78 284.00
IUUC-Tca-121066 Theobroma cacao 47.24 3.00e-93 333.00
IUUC-Tre-122112 Trichoderma reesei 65.06 1.00e-142 497.00
IUUC-Tvi-122355 Trichoderma virens 60.41 1.00e-142 496.00
IUUC-Tae-123931 Triticum aestivum 46.80 1.00e-84 304.00
IUUC-Tur-126587 Triticum urartu 46.76 4.00e-85 306.00
IUUC-Tme-126963 Tuber melanosporum 67.43 1.00e-148 516.00
IUUC-Tbe-127304 Tupaia belangeri 41.94 1.00e-65 242.00
IUUC-Ttr-128536 Tursiops truncatus 46.63 2.00e-76 278.00
IUUC-Uma-129538 Ustilago maydis 57.65 2.00e-133 467.00
IUUC-Vda-129860 Verticillium dahliae 66.01 1.00e-147 513.00
IUUC-Vpa-130239 Vicugna pacos 35.69 1.00e-45 176.00
IUUC-Vvi-130897 Vitis vinifera 43.72 2.00e-97 347.00
IUUC-Xtr-132300 Xenopus tropicalis 46.90 1.00e-80 292.00
IUUC-Xma-134105 Xiphophorus maculatus 46.90 2.00e-81 294.00
IUUC-Yli-134345 Yarrowia lipolytica 77.60 0.00e+00 627.00
IUUC-Zma-135384 Zea mays 48.47 3.00e-87 313.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved