iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027631

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Cell division cycle 40 homolog (S. cerevisiae)

Genbank Nucleotide ID

CR545462

Gene Name

cdc40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000041226.5	ENSDART00000060432.5	ENSDARP00000060431.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-34	117.3	329	366
UBD/Beta-Prp	9.40e-48	163.8	278	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f ++ t ++s+++D  ik+WD  tg ++
   Q: 329  GHSKAVRDVCFnNSgTQFLSAAYDRYIKLWDSETGQCI 366
           8**********9556*****************999986 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++ ++     t+ gh+++v+ v+++ +g  + s+++Dr ++lWd++tg+++
   Q: 278  KQLHVWTGHTKGVSAIRLFPkSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCI 366
           78899999999999999999777999999999999999997766555599999999999999999999999999999999999999999 PP
   S: 173  rtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllk 258
            ++t  + +  y+++f+++    + lv+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     k
   Q: 367  SRFT--NRKVPYCVKFNPDEdkqNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFK 453
           9997..47777899988888777899999999999999999999999999999999999999999999999999999999777777778 PP
   S: 259  tlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
            ++ +  ++++  +ls++++ l+  s d+++ i+
   Q: 454  YIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF 487
           8888888888888888888888888888887776 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAAAVGSLVS YGSDSDSENE SESPNNPQEI DPDALVHLKP LKSGGVTTVA VLNSAPEVAV 60
KEDVETGVHL DPALKEVSYN PTYETMFAPE FGPMNPFRSQ QMAAPRNMLS GYAEPAHVND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTGATCTT CGAGGACCCG CTGACGAAAT AGCCACAACA GTCAAGATGG CGGCGGCGGT 60
GGGTTCCCTC GTTTCGTACG GCAGCGACTC AGATTCTGAA AACGAGTCTG AATCTCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	50.00	9.00e-145	507.00
IUUC-Aml-002243	Ailuropoda melanoleuca	82.37	0.00e+00	691.00
IUUC-Atr-002502	Amborella trichopoda	50.28	1.00e-155	543.00
IUUC-Apl-003885	Anas platyrhynchos	85.88	0.00e+00	951.00
IUUC-Aca-004854	Anolis carolinensis	62.30	0.00e+00	680.00
IUUC-Aly-006158	Arabidopsis lyrata	49.91	3.00e-154	538.00
IUUC-Ath-007474	Arabidopsis thaliana	51.59	2.00e-155	542.00
IUUC-Ago-007726	Ashbya gossypii	37.60	9.00e-75	274.00
IUUC-Acl-008220	Aspergillus clavatus	42.78	4.00e-133	468.00
IUUC-Afl-008473	Aspergillus flavus	41.71	1.00e-130	460.00
IUUC-Afu-008773	Aspergillus fumigatus	43.06	2.00e-132	466.00
IUUC-Ani-009323	Aspergillus nidulans	42.71	2.00e-117	416.00
IUUC-Ang-009851	Aspergillus niger	41.48	2.00e-132	466.00
IUUC-Aor-009950	Aspergillus oryzae	41.71	1.00e-130	460.00
IUUC-Ate-010372	Aspergillus terreus	43.97	1.00e-133	470.00
IUUC-Ame-011660	Astyanax mexicanus	90.85	0.00e+00	1066.00
IUUC-Bgr-012230	Blumeria graminis	44.03	8.00e-126	444.00
IUUC-Bta-012568	Bos taurus	85.16	0.00e+00	959.00
IUUC-Bci-013646	Botrytis cinerea	44.49	5.00e-123	434.00
IUUC-Bdi-014199	Brachypodium distachyon	50.86	4.00e-146	511.00
IUUC-Bol-015695	Brassica oleracea	50.75	6.00e-160	557.00
IUUC-Bra-017923	Brassica rapa	51.23	1.00e-160	560.00
IUUC-Cel-018535	Caenorhabditis elegans	50.60	7.00e-179	620.00
IUUC-Cja-019071	Callithrix jacchus	85.16	0.00e+00	958.00
IUUC-Cfa-020559	Canis familiaris	85.16	0.00e+00	958.00
IUUC-Cpo-022356	Cavia porcellus	85.16	0.00e+00	957.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	43.44	1.00e-76	279.00
IUUC-Csa-023125	Chlorocebus sabaeus	85.16	0.00e+00	959.00
IUUC-Cho-024676	Choloepus hoffmanni	79.30	0.00e+00	858.00
IUUC-Cin-025229	Ciona intestinalis	68.91	0.00e+00	752.00
IUUC-Csv-025868	Ciona savignyi	75.27	1.00e-42	163.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	39.92	2.00e-107	382.00
IUUC-Cne-026885	Cryptococcus neoformans	49.26	1.00e-148	520.00
IUUC-Dno-029815	Dasypus novemcinctus	75.86	0.00e+00	876.00
IUUC-Dor-031143	Dipodomys ordii	71.61	0.00e+00	785.00
IUUC-Dse-031520	Dothistroma septosporum	43.91	5.00e-99	355.00
IUUC-Dme-032050	Drosophila melanogaster	63.90	0.00e+00	748.00
IUUC-Ete-032866	Echinops telfairi	82.60	0.00e+00	931.00
IUUC-Eca-033384	Equus caballus	84.98	0.00e+00	952.00
IUUC-Eeu-034471	Erinaceus europaeus	71.79	0.00e+00	728.00
IUUC-Fca-035727	Felis catus	85.16	0.00e+00	960.00
IUUC-Fal-036774	Ficedula albicollis	86.42	0.00e+00	962.00
IUUC-Fox-037951	Fusarium oxysporum	43.80	1.00e-128	453.00
IUUC-Fso-038287	Fusarium solani	45.07	1.00e-126	446.00
IUUC-Gmo-039670	Gadus morhua	86.85	0.00e+00	1024.00
IUUC-Ggr-039764	Gaeumannomyces graminis	39.96	7.00e-116	410.00
IUUC-Gga-040293	Gallus gallus	87.07	0.00e+00	963.00
IUUC-Gac-042159	Gasterosteus aculeatus	86.28	0.00e+00	1060.00
IUUC-Gma-044299	Glycine max	63.64	3.00e-138	485.00
IUUC-Ggo-044864	Gorilla gorilla	85.35	0.00e+00	959.00
IUUC-Hsa-046602	Homo sapiens	85.35	0.00e+00	959.00
IUUC-Hvu-047431	Hordeum vulgare	29.84	1.00e-38	153.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	88.52	0.00e+00	754.00
IUUC-Kpa-049318	Komagataella pastoris	44.54	9.00e-97	347.00
IUUC-Lch-049796	Latimeria chalumnae	74.41	0.00e+00	842.00
IUUC-Lpe-051153	Leersia perrieri	51.53	1.00e-147	516.00
IUUC-Loc-052467	Lepisosteus oculatus	90.15	0.00e+00	1045.00
IUUC-Lma-053107	Leptosphaeria maculans	49.38	2.00e-115	409.00
IUUC-Laf-053787	Loxodonta africana	84.67	0.00e+00	981.00
IUUC-Mcc-055706	Macaca mulatta	85.16	0.00e+00	958.00
IUUC-Meu-056757	Macropus eugenii	83.88	3.00e-168	585.00
IUUC-Mor-057079	Magnaporthe oryzae	39.74	3.00e-114	405.00
IUUC-Mpo-057533	Magnaporthe poae	50.42	2.00e-112	399.00
IUUC-Mtr-057950	Medicago truncatula	44.98	2.00e-150	526.00
IUUC-Mla-058910	Melampsora laricipopulina	46.71	1.00e-147	516.00
IUUC-Mga-059366	Meleagris gallopavo	86.10	0.00e+00	961.00
IUUC-Mvi-060349	Microbotryum violaceum	58.19	1.00e-137	484.00
IUUC-Mmr-061209	Microcebus murinus	84.98	0.00e+00	984.00
IUUC-Mdo-062118	Monodelphis domestica	83.88	0.00e+00	983.00
IUUC-Mmu-063173	Mus musculus	85.16	0.00e+00	960.00
IUUC-Mac-065080	Musa acuminata	50.98	9.00e-153	533.00
IUUC-Mpu-066659	Mustela putorius furo	85.16	0.00e+00	959.00
IUUC-Mlu-067029	Myotis lucifugus	84.62	0.00e+00	938.00
IUUC-Nfi-068334	Neosartorya fischeri	44.03	9.00e-133	467.00
IUUC-Ncr-068675	Neurospora crassa	38.27	2.00e-103	369.00
IUUC-Nle-070113	Nomascus leucogenys	84.80	0.00e+00	954.00
IUUC-Opr-070685	Ochotona princeps	78.02	0.00e+00	910.00
IUUC-Ont-071680	Oreochromis niloticus	88.81	0.00e+00	1066.00
IUUC-Oan-073573	Ornithorhynchus anatinus	85.86	0.00e+00	881.00
IUUC-Ocu-074074	Oryctolagus cuniculus	84.62	0.00e+00	981.00
IUUC-Oba-075625	Oryza barthii	51.81	3.00e-148	518.00
IUUC-Obr-076510	Oryza brachyantha	50.94	5.00e-148	517.00
IUUC-Ogl-077275	Oryza glaberrima	51.81	3.00e-148	518.00
IUUC-Ogu-078563	Oryza glumaepatula	51.81	4.00e-148	518.00
IUUC-Oin-079898	Oryza indica	63.16	1.00e-134	473.00
IUUC-Olo-081080	Oryza longistaminata	52.50	7.00e-142	497.00
IUUC-Ome-081794	Oryza meridionalis	33.06	5.00e-30	125.00
IUUC-Oni-083121	Oryza nivara	51.81	3.00e-148	518.00
IUUC-Opu-083329	Oryza punctata	51.21	3.00e-147	515.00
IUUC-Oru-084807	Oryza rufipogon	51.57	5.00e-131	461.00
IUUC-Osa-086039	Oryza sativa	51.90	7.00e-149	520.00
IUUC-Ola-087149	Oryzias latipes	89.25	0.00e+00	1042.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.53	4.00e-120	425.00
IUUC-Oga-088359	Otolemur garnettii	85.16	0.00e+00	958.00
IUUC-Oar-089390	Ovis aries	85.16	0.00e+00	957.00
IUUC-Ptr-090894	Pan troglodytes	85.35	0.00e+00	959.00
IUUC-Pan-092476	Papio anubis	85.16	0.00e+00	958.00
IUUC-Psi-093527	Pelodiscus sinensis	82.53	0.00e+00	907.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.64	3.00e-114	405.00
IUUC-Ppa-095386	Physcomitrella patens	50.00	1.00e-153	536.00
IUUC-Pfo-096139	Poecilia formosa	88.47	0.00e+00	1060.00
IUUC-Pab-097838	Pongo abelii	85.01	0.00e+00	847.00
IUUC-Pop-098945	Populus trichocarpa	49.91	4.00e-154	538.00
IUUC-Pca-100876	Procavia capensis	71.43	0.00e+00	814.00
IUUC-Ppe-101777	Prunus persica	50.00	5.00e-151	528.00
IUUC-Pva-102418	Pteropus vampyrus	84.98	0.00e+00	958.00
IUUC-Pgr-103456	Puccinia graminis	49.63	1.00e-157	550.00
IUUC-Ptt-103731	Puccinia triticina	46.67	1.00e-145	510.00
IUUC-Pte-104386	Pyrenophora teres	49.88	2.00e-116	412.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.37	3.00e-116	412.00
IUUC-Rno-105694	Rattus norvegicus	80.95	0.00e+00	887.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.84	5.00e-77	281.00
IUUC-Sha-106709	Sarcophilus harrisii	84.07	0.00e+00	981.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.94	3.00e-123	436.00
IUUC-Spo-108331	Schizosaccharomyces pombe	41.44	9.00e-120	424.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	44.35	9.00e-116	410.00
IUUC-Smo-108778	Selaginella moellendorffii	46.36	7.00e-131	461.00
IUUC-Sit-110446	Setaria italica	51.24	8.00e-148	517.00
IUUC-Sly-111330	Solanum lycopersicum	50.84	9.00e-153	533.00
IUUC-Stu-112610	Solanum tuberosum	50.00	3.00e-153	535.00
IUUC-Sar-113065	Sorex araneus	64.12	5.00e-105	374.00
IUUC-Sbi-114005	Sorghum bicolor	51.24	2.00e-147	516.00
IUUC-Sre-114988	Sporisorium reilianum	49.08	4.00e-155	541.00
IUUC-Ssc-115760	Sus scrofa	85.16	0.00e+00	958.00
IUUC-Tgu-116493	Taeniopygia guttata	86.87	0.00e+00	969.00
IUUC-Tru-118489	Takifugu rubripes	85.03	0.00e+00	1026.00
IUUC-Tsy-119332	Tarsius syrichta	84.98	0.00e+00	982.00
IUUC-Tni-120202	Tetraodon nigroviridis	83.85	0.00e+00	953.00
IUUC-Tca-121429	Theobroma cacao	49.07	7.00e-151	527.00
IUUC-Tre-122162	Trichoderma reesei	42.75	2.00e-124	439.00
IUUC-Tvi-122500	Trichoderma virens	41.44	2.00e-122	432.00
IUUC-Tae-125557	Triticum aestivum	49.33	3.00e-144	505.00
IUUC-Tur-126554	Triticum urartu	49.23	3.00e-142	498.00
IUUC-Tme-126919	Tuber melanosporum	45.73	1.00e-138	487.00
IUUC-Tbe-127968	Tupaia belangeri	79.67	0.00e+00	910.00
IUUC-Ttr-129215	Tursiops truncatus	84.98	0.00e+00	953.00
IUUC-Uma-129622	Ustilago maydis	48.21	1.00e-158	553.00
IUUC-Vda-129750	Verticillium dahliae	42.80	6.00e-123	434.00
IUUC-Vpa-130617	Vicugna pacos	85.49	0.00e+00	899.00
IUUC-Vvi-131238	Vitis vinifera	49.06	1.00e-150	526.00
IUUC-Xtr-131865	Xenopus tropicalis	82.73	0.00e+00	978.00
IUUC-Xma-133627	Xiphophorus maculatus	88.47	0.00e+00	1063.00
IUUC-Yli-134390	Yarrowia lipolytica	45.05	2.00e-118	419.00
IUUC-Zma-135925	Zea mays	52.57	1.00e-144	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence