iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118081

UUCD1 version

UUC-TaR-00700

Ensembl Protein ID

ENSTRUP00000033481.1

UniProt Accession

H2U965; H2U965_TAKRU

Protein Name

Uncharacterized protein

Gene Name

snrnp40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000013161.1	ENSTRUT00000033607.1	ENSTRUP00000033481.1
ENSTRUG00000013161.1	ENSTRUT00000033608.1	ENSTRUP00000033482.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-43	145.8	235	267
UBD/Beta-Prp	9.90e-63	213.3	64	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH dsvt+l++ s+  +l+s s D+t+++WD+r
   Q: 235  GHGDSVTGLSLsSEgSYLLSNSMDNTVRIWDVR 267
           8**********98889***************97 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           +sghe+ev+++kf+p+g +l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 64   MSGHEGEVYCCKFHPNGATLASSGFDRLILLWNVYgDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVGVWDSETGERIK-RLKG 151
           69******************************87659999********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++ ++ ++gh d
   Q: 152  HTSFVNTCYPARRGpQLICTGSDDGTVKLWDIRKKGAIHTFQ--NTYQVLAVTFNDTSDQIMSGGIDNDIKVWDLRQNKLIYNMQGHGD 238
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s s+D+++riWd+r
   Q: 239  SVTGLSLSSEGSYLLSNSMDNTVRIWDVR 267
           ***************************97 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MIEPIKRVAD MAVVPTAVKR PRMELVAAAQ SQQLVATNKH CNAGTFVNKG PPRTSSLQAP 60
IMLMSGHEGE VYCCKFHPNG ATLASSGFDR LILLWNVYGD CENYATLKGH SGAVMELHYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGAAC CTATTAAGAG GGTAGCGGAC ATGGCGGTGG TTCCTACTGC CGTGAAGCGG 60
CCTCGGATGG AGCTGGTGGC GGCGGCTCAG TCTCAACAAC TCGTGGCCAC GGTACGGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	53.94	7.00e-117	413.00
IUUC-Aml-001428	Ailuropoda melanoleuca	83.14	8.00e-161	559.00
IUUC-Atr-003164	Amborella trichopoda	59.18	4.00e-121	427.00
IUUC-Apl-003447	Anas platyrhynchos	91.29	8.00e-155	539.00
IUUC-Aca-004270	Anolis carolinensis	76.58	2.00e-163	567.00
IUUC-Aly-005659	Arabidopsis lyrata	60.84	1.00e-121	429.00
IUUC-Ath-006764	Arabidopsis thaliana	60.84	1.00e-121	429.00
IUUC-Acl-008324	Aspergillus clavatus	47.04	9.00e-95	340.00
IUUC-Afl-008607	Aspergillus flavus	48.99	1.00e-87	316.00
IUUC-Afu-008998	Aspergillus fumigatus	46.76	1.00e-94	339.00
IUUC-Ani-009363	Aspergillus nidulans	44.94	2.00e-93	335.00
IUUC-Ang-009513	Aspergillus niger	44.63	2.00e-85	309.00
IUUC-Aor-010237	Aspergillus oryzae	47.61	4.00e-95	341.00
IUUC-Ate-010374	Aspergillus terreus	43.82	7.00e-83	300.00
IUUC-Ame-010728	Astyanax mexicanus	86.91	0.00e+00	636.00
IUUC-Bgr-012297	Blumeria graminis	47.25	7.00e-71	259.00
IUUC-Bta-012433	Bos taurus	83.33	1.00e-168	585.00
IUUC-Bci-013763	Botrytis cinerea	48.04	3.00e-94	338.00
IUUC-Bdi-014490	Brachypodium distachyon	54.68	4.00e-117	414.00
IUUC-Bol-016479	Brassica oleracea	59.87	4.00e-121	427.00
IUUC-Bra-017219	Brassica rapa	60.19	2.00e-121	429.00
IUUC-Cel-018512	Caenorhabditis elegans	53.87	1.00e-110	392.00
IUUC-Cja-019308	Callithrix jacchus	83.06	6.00e-171	593.00
IUUC-Cfa-020998	Canis familiaris	83.33	1.00e-170	592.00
IUUC-Cpo-021580	Cavia porcellus	83.61	4.00e-170	590.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	55.24	3.00e-108	384.00
IUUC-Csa-023456	Chlorocebus sabaeus	83.06	3.00e-169	587.00
IUUC-Cho-024644	Choloepus hoffmanni	91.29	3.00e-169	587.00
IUUC-Cin-025463	Ciona intestinalis	59.55	3.00e-129	454.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	48.22	1.00e-93	336.00
IUUC-Cne-026780	Cryptococcus neoformans	38.92	2.00e-67	249.00
IUUC-Dre-027671	Danio rerio	88.02	0.00e+00	654.00
IUUC-Dno-029769	Dasypus novemcinctus	83.61	7.00e-173	599.00
IUUC-Dor-030776	Dipodomys ordii	75.56	5.00e-74	270.00
IUUC-Dse-031316	Dothistroma septosporum	40.17	9.00e-84	303.00
IUUC-Dme-031756	Drosophila melanogaster	56.20	1.00e-123	436.00
IUUC-Ete-032753	Echinops telfairi	84.04	8.00e-146	509.00
IUUC-Eca-033979	Equus caballus	83.33	1.00e-168	585.00
IUUC-Eeu-034862	Erinaceus europaeus	90.65	3.00e-67	248.00
IUUC-Fca-036110	Felis catus	82.58	5.00e-141	493.00
IUUC-Fal-037648	Ficedula albicollis	90.73	4.00e-169	587.00
IUUC-Fox-037861	Fusarium oxysporum	46.28	6.00e-92	330.00
IUUC-Fso-038405	Fusarium solani	45.95	1.00e-91	329.00
IUUC-Gmo-039383	Gadus morhua	89.14	0.00e+00	649.00
IUUC-Ggr-040082	Gaeumannomyces graminis	43.15	8.00e-83	300.00
IUUC-Gga-040785	Gallus gallus	84.00	2.00e-171	595.00
IUUC-Gac-041645	Gasterosteus aculeatus	92.20	0.00e+00	640.00
IUUC-Gma-044329	Glycine max	60.19	5.00e-120	423.00
IUUC-Ggo-044800	Gorilla gorilla	73.85	1.00e-137	483.00
IUUC-Hsa-045918	Homo sapiens	83.06	3.00e-169	587.00
IUUC-Hvu-047342	Hordeum vulgare	53.94	2.00e-116	412.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	78.73	2.00e-97	348.00
IUUC-Kpa-049149	Komagataella pastoris	33.98	4.00e-36	144.00
IUUC-Lch-050395	Latimeria chalumnae	81.34	0.00e+00	629.00
IUUC-Lpe-051275	Leersia perrieri	54.97	3.00e-118	418.00
IUUC-Loc-052666	Lepisosteus oculatus	87.05	6.00e-176	609.00
IUUC-Lma-053129	Leptosphaeria maculans	44.30	2.00e-85	308.00
IUUC-Laf-054512	Loxodonta africana	91.53	1.00e-167	582.00
IUUC-Mcc-055819	Macaca mulatta	83.06	3.00e-169	587.00
IUUC-Meu-056350	Macropus eugenii	81.43	2.00e-142	498.00
IUUC-Mor-057063	Magnaporthe oryzae	45.01	4.00e-92	331.00
IUUC-Mpo-057369	Magnaporthe poae	44.02	9.00e-84	303.00
IUUC-Mtr-058228	Medicago truncatula	59.87	8.00e-120	423.00
IUUC-Mla-059093	Melampsora laricipopulina	40.59	8.00e-69	253.00
IUUC-Mga-059719	Meleagris gallopavo	91.32	1.00e-169	588.00
IUUC-Mvi-060285	Microbotryum violaceum	38.58	4.00e-65	241.00
IUUC-Mmr-061685	Microcebus murinus	77.50	8.00e-152	529.00
IUUC-Mdo-062121	Monodelphis domestica	81.54	2.00e-166	577.00
IUUC-Mmu-063216	Mus musculus	83.06	1.00e-172	598.00
IUUC-Mac-065463	Musa acuminata	54.37	1.00e-106	379.00
IUUC-Mpu-066390	Mustela putorius furo	83.33	5.00e-172	596.00
IUUC-Mlu-067686	Myotis lucifugus	80.83	2.00e-165	574.00
IUUC-Nfi-068509	Neosartorya fischeri	47.04	9.00e-95	340.00
IUUC-Ncr-068870	Neurospora crassa	45.48	1.00e-93	336.00
IUUC-Nle-069539	Nomascus leucogenys	83.06	5.00e-169	587.00
IUUC-Opr-070555	Ochotona princeps	72.22	1.00e-149	521.00
IUUC-Ont-071490	Oreochromis niloticus	92.50	0.00e+00	664.00
IUUC-Oan-073044	Ornithorhynchus anatinus	72.33	8.00e-142	496.00
IUUC-Ocu-073764	Oryctolagus cuniculus	83.06	2.00e-172	598.00
IUUC-Oba-075704	Oryza barthii	58.58	1.00e-117	416.00
IUUC-Obr-076455	Oryza brachyantha	55.26	8.00e-118	417.00
IUUC-Ogl-077382	Oryza glaberrima	55.56	3.00e-118	418.00
IUUC-Ogu-078739	Oryza glumaepatula	58.58	9.00e-118	416.00
IUUC-Oin-079072	Oryza indica	58.58	9.00e-118	416.00
IUUC-Olo-080809	Oryza longistaminata	58.58	9.00e-118	416.00
IUUC-Ome-081677	Oryza meridionalis	58.58	3.00e-117	414.00
IUUC-Oni-082937	Oryza nivara	58.58	9.00e-118	416.00
IUUC-Opu-083510	Oryza punctata	58.58	9.00e-118	416.00
IUUC-Oru-084360	Oryza rufipogon	55.26	6.00e-118	417.00
IUUC-Osa-085640	Oryza sativa	55.26	4.00e-118	417.00
IUUC-Ola-086504	Oryzias latipes	92.76	0.00e+00	642.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.31	6.00e-64	237.00
IUUC-Oga-088773	Otolemur garnettii	83.06	4.00e-170	590.00
IUUC-Oar-089677	Ovis aries	82.64	2.00e-167	581.00
IUUC-Ptr-090724	Pan troglodytes	82.18	6.00e-161	560.00
IUUC-Pan-092683	Papio anubis	83.06	3.00e-169	587.00
IUUC-Psi-093415	Pelodiscus sinensis	92.18	4.00e-168	583.00
IUUC-Pma-094562	Petromyzon marinus	75.90	2.00e-169	587.00
IUUC-Pno-095014	Phaeosphaeria nodorum	44.95	1.00e-86	313.00
IUUC-Ppa-095822	Physcomitrella patens	61.61	1.00e-120	425.00
IUUC-Pfo-096579	Poecilia formosa	93.04	0.00e+00	645.00
IUUC-Pab-098313	Pongo abelii	83.06	3.00e-169	587.00
IUUC-Pop-099747	Populus trichocarpa	59.81	9.00e-121	426.00
IUUC-Pca-100871	Procavia capensis	77.86	2.00e-122	431.00
IUUC-Ppe-101389	Prunus persica	62.14	1.00e-123	435.00
IUUC-Pva-102468	Pteropus vampyrus	69.72	7.00e-131	459.00
IUUC-Pgr-103523	Puccinia graminis	39.66	2.00e-74	272.00
IUUC-Ptt-103930	Puccinia triticina	39.61	5.00e-73	268.00
IUUC-Pte-104299	Pyrenophora teres	44.74	7.00e-91	327.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	45.03	5.00e-91	327.00
IUUC-Rno-105796	Rattus norvegicus	83.33	7.00e-172	596.00
IUUC-Sha-107191	Sarcophilus harrisii	81.27	2.00e-166	577.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	37.58	1.00e-62	233.00
IUUC-Spo-108249	Schizosaccharomyces pombe	44.77	1.00e-79	289.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	47.27	2.00e-92	332.00
IUUC-Sit-110805	Setaria italica	54.09	3.00e-117	414.00
IUUC-Sly-111567	Solanum lycopersicum	62.14	3.00e-123	434.00
IUUC-Stu-112562	Solanum tuberosum	62.14	3.00e-124	437.00
IUUC-Sar-112991	Sorex araneus	90.41	1.00e-113	401.00
IUUC-Sbi-114010	Sorghum bicolor	53.69	1.00e-116	412.00
IUUC-Sre-114947	Sporisorium reilianum	43.30	4.00e-73	268.00
IUUC-Ssc-115371	Sus scrofa	83.33	1.00e-168	585.00
IUUC-Tgu-117429	Taeniopygia guttata	88.60	2.00e-166	578.00
IUUC-Tsy-119101	Tarsius syrichta	72.22	1.00e-142	499.00
IUUC-Tni-120532	Tetraodon nigroviridis	94.71	0.00e+00	650.00
IUUC-Tca-121373	Theobroma cacao	61.49	1.00e-122	432.00
IUUC-Tre-122050	Trichoderma reesei	45.95	4.00e-91	327.00
IUUC-Tvi-122394	Trichoderma virens	47.10	2.00e-86	312.00
IUUC-Tae-124661	Triticum aestivum	54.07	4.00e-116	410.00
IUUC-Tme-126998	Tuber melanosporum	49.19	6.00e-91	327.00
IUUC-Tbe-128032	Tupaia belangeri	83.89	4.00e-171	593.00
IUUC-Ttr-129102	Tursiops truncatus	74.72	1.00e-142	498.00
IUUC-Uma-129363	Ustilago maydis	41.98	4.00e-77	281.00
IUUC-Vda-129891	Verticillium dahliae	48.48	4.00e-94	337.00
IUUC-Vpa-130827	Vicugna pacos	82.78	7.00e-168	583.00
IUUC-Vvi-131202	Vitis vinifera	60.84	1.00e-121	429.00
IUUC-Xtr-132769	Xenopus tropicalis	79.89	3.00e-164	570.00
IUUC-Xma-133147	Xiphophorus maculatus	92.76	0.00e+00	644.00
IUUC-Yli-134352	Yarrowia lipolytica	33.05	7.00e-38	150.00
IUUC-Zma-135294	Zea mays	56.96	5.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence