iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114520

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G004600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g000540	Sb08g000540.1	Sb08g000540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E1	1.20e-172	575.6	447	934

Active Site

Position(s)	Description	Evidence
628	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU10132}

Domain Profile

   S: 1    YDRQirlwGeeaqeklksakvllvGagglGcEllKnLvlaGv.....gsitvvDmdtvevsnlnrqFLfraedvgksKAevaaealkelnpdvnve 91
           YD Qi ++G++ q+kl+++k+++vG g+lGcE+lKnL+l+G+     g++tv+D+d +e+snl+rqFLfr++++g++K+ vaa a+  +np+ +ve
   Q: 447  YDAQISVFGAKLQKKLEQSKIFMVGSGALGCEFLKNLALMGIscsqnGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHVE 542
           ************************************************************************************************ PP
   S: 92   aheesiteleeeiv...FfkkfdvVvlaldnrearrkvnrlclnarvpliesgtlGllGqvrviikgltecyscsddppqktiPfctlketpnaae 184
           a +++ ++++e+++   F + +d Vv+aldn+ ar++++++c++ ++pl+esgtlG + +++ +i++lte y +s+dpp+k++P+ct+ ++p +++
   Q: 543  ALQNRASPETENVFndaFWESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNID 638
           ************9999******************************************************************************** PP
   S: 185  htiewa............vlfnklleeeageeevlekldseekeegkdkvkselksedeenfeeaieiavkafakttinsikqllksfecdivtks 268
           h+++wa              +n +l++  g  + +     ++ ++ +++v + l++ + e+f+++i++a+ +f+ +++n +kql+  f+ d +t+s
   Q: 639  HCLTWArsefegllektpTEVNAFLSNPGGYATAARTAGDAQARDQLERVIECLETDKCETFQDCITWARLKFEDYFSNRVKQLTFTFPEDAMTSS 734
           *****************999999999999999999999999******************************************************* PP
   S: 269  kspfwv..........................................................sfcsnaealqvpekvekdeevvkasap.lyll 305
           ++pfw+                                                            +++  +++++ek+++   ++ ++a+ ++ l
   Q: 735  GAPFWSapkrfprplefsssdsshlnfllaasilraetfgipipdwaknptklaeavdkvivpdFQPKQGVKIETDEKATSLSSASVDDAAvIEEL 830
           ********************************************999998877777777666644444445555556666555555455449**** PP
   S: 306  lralerfekk..kgrkpgelsfekddds..avdlvtaaanlraeslgiepkldddlikeiagniipaiattnavvgGlaaqEviKvvsg..kfepl 395
           +++le  +k+  +g  ++ ++fekddd   ++dl++ +an+ra +++i++ +d+ + k iag+iipaiat +a+  Gl+++E++Kv+ g  k e +
   Q: 831  IAKLEAISKTlpPGFHMNPIQFEKDDDTnfHMDLIAGFANMRARNYSIPE-VDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLAGghKVEDY 925
           *******9976689************************************.**************************************999**** PP
   S: 396  knfflfdae 404
           +n+f ++a+
   Q: 926  RNTFANLAI 934
           ****99876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLPQKRGVDV GEVQDLHNKA PRAAASAQDR DKEVVAEMAG RAPEIDEDLH SRQLAVYGRE 60
TMKRLFGSNV LVSGLQGLGA EIAKNLALAG VKSVTLHDDN KVELWDLSSN FFLSEKDVGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAACCCTAG GCCAGACAAG AGCTGAAGCA GAGCGGAGGT CAGCTCGATC GCCGGCCATC 60
GAATCCAGCT CCTCCAAGGT GAGATCTCTT CCCCCGAATC CGCCCCGCGC CACCTCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0436--Ligase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR032420--E1_4HB
IPR032418--E1_FCCH
IPR016040--NAD(P)-bd_dom
IPR000594--ThiF_NAD_FAD-bd
IPR018965--Ub-activating_enz_E1_C
IPR019572--UBA_E1_Cys
IPR018075--UBQ-activ_enz_E1
IPR018074--UBQ-activ_enz_E1_CS
IPR033127--UBQ-activ_enz_E1_Cys_AS
IPR000011--UBQ/SUMO-activ_enz_E1-like

PROSITE

PS00536--UBIQUITIN_ACTIVAT_1
PS00865--UBIQUITIN_ACTIVAT_2

Pfam

PF16191--E1_4HB
PF16190--E1_FCCH
PF09358--E1_UFD
PF00899--ThiF
PF10585--UBA_e1_thiolCys

PRINTS

PR01849--UBIQUITINACT

SMART

SM00985--UBA_e1_C

Gene Ontology

GO:0005524--F:ATP binding
GO:0008641--F:small protein activating enzyme activity
GO:0006464--P:cellular protein modification process

KEGG

sbi:SORBI_08g000540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005515	Arabidopsis lyrata	79.17	0.00e+00	1709.00
IUUC-Ath-006891	Arabidopsis thaliana	79.27	0.00e+00	1704.00
IUUC-Acl-008181	Aspergillus clavatus	45.08	0.00e+00	823.00
IUUC-Afu-009065	Aspergillus fumigatus	45.75	0.00e+00	855.00
IUUC-Ang-009737	Aspergillus niger	46.15	0.00e+00	825.00
IUUC-Ate-010466	Aspergillus terreus	46.15	0.00e+00	867.00
IUUC-Ame-010933	Astyanax mexicanus	46.55	0.00e+00	853.00
IUUC-Bgr-012281	Blumeria graminis	44.67	0.00e+00	833.00
IUUC-Bol-015665	Brassica oleracea	79.76	0.00e+00	1686.00
IUUC-Bra-017252	Brassica rapa	79.68	0.00e+00	1704.00
IUUC-Cel-018260	Caenorhabditis elegans	39.52	0.00e+00	660.00
IUUC-Cne-026960	Cryptococcus neoformans	45.58	0.00e+00	866.00
IUUC-Dre-028149	Danio rerio	46.76	0.00e+00	884.00
IUUC-Dor-030229	Dipodomys ordii	43.61	0.00e+00	842.00
IUUC-Dse-031524	Dothistroma septosporum	44.65	0.00e+00	827.00
IUUC-Dme-032045	Drosophila melanogaster	44.90	0.00e+00	853.00
IUUC-Fso-038339	Fusarium solani	47.05	0.00e+00	841.00
IUUC-Kpa-049112	Komagataella pastoris	46.03	0.00e+00	859.00
IUUC-Mla-059176	Melampsora laricipopulina	47.06	0.00e+00	875.00
IUUC-Nfi-068407	Neosartorya fischeri	45.87	0.00e+00	835.00
IUUC-Ncr-068698	Neurospora crassa	46.09	0.00e+00	867.00
IUUC-Nle-070072	Nomascus leucogenys	43.23	0.00e+00	809.00
IUUC-Opr-070715	Ochotona princeps	36.41	1.00e-157	550.00
IUUC-Obr-076557	Oryza brachyantha	91.63	0.00e+00	1897.00
IUUC-Oin-079370	Oryza indica	89.35	0.00e+00	1872.00
IUUC-Opu-083977	Oryza punctata	91.83	0.00e+00	1882.00
IUUC-Pno-095154	Phaeosphaeria nodorum	44.70	0.00e+00	851.00
IUUC-Ptt-103939	Puccinia triticina	46.66	0.00e+00	848.00
IUUC-Pte-104200	Pyrenophora teres	45.95	0.00e+00	883.00
IUUC-Pyt-104441	Pyrenophora triticirepentis	45.44	0.00e+00	878.00
IUUC-Sre-115148	Sporisorium reilianum	45.57	0.00e+00	823.00
IUUC-Tre-122009	Trichoderma reesei	47.41	0.00e+00	839.00
IUUC-Tvi-122259	Trichoderma virens	47.70	0.00e+00	852.00
IUUC-Tbe-127587	Tupaia belangeri	40.95	7.00e-140	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence