iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099380

Ensembl Protein ID

POPTR_0005s10460.1

UniProt Accession

B9H674; B9H674_POPTR

Genbank Protein ID

EEE94211.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s10460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s10460	POPTR_0005s10460.1	POPTR_0005s10460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-07	32.2	563	591

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           +sv +++  ++  +l++Gsd g + v+D+
   Q: 563  GSVLSINIsPSlVHLAVGSDQGYVSVFDI 591
           6899999999999***************5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

PGGASDGLKP SDVEPRLVFH YGIPHGATKF AYDTIQKILA ISTQDGRIKL FGRDNTQALL 60
ESPEAVPSKF LQFIQNKGIL VNVTSKNQIE ASNPIRVWDL DSKVLSNVHV FKEDITSFTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGGAGGGG CTTCTGATGG CTTGAAACCC AGTGATGTAG AACCACGATT GGTATTCCAT 60
TATGGGATAC CACATGGAGC AACGAAGTTT GCATATGACA CCATTCAAAA GATACTTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013905--Lgl_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF08596--Lgl_C

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005886--C:plasma membrane
GO:0005096--F:GTPase activator activity
GO:0017137--F:Rab GTPase binding
GO:0019905--F:syntaxin binding
GO:0017157--P:regulation of exocytosis

KEGG

pop:POPTR_0005s10460g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001923	Ailuropoda melanoleuca	26.83	3.00e-17	84.00
IUUC-Aca-004796	Anolis carolinensis	27.64	3.00e-17	84.00
IUUC-Aly-005994	Arabidopsis lyrata	54.90	0.00e+00	1082.00
IUUC-Ath-007593	Arabidopsis thaliana	54.42	0.00e+00	1043.00
IUUC-Ame-010663	Astyanax mexicanus	22.60	1.00e-19	92.00
IUUC-Bta-013413	Bos taurus	26.94	3.00e-17	84.00
IUUC-Bol-015893	Brassica oleracea	54.06	0.00e+00	1019.00
IUUC-Bra-018080	Brassica rapa	51.36	0.00e+00	790.00
IUUC-Cja-018984	Callithrix jacchus	26.40	5.00e-17	83.20
IUUC-Cfa-021212	Canis familiaris	26.83	3.00e-17	84.00
IUUC-Cpo-021336	Cavia porcellus	24.88	1.00e-07	52.00
IUUC-Csa-023249	Chlorocebus sabaeus	26.83	4.00e-17	83.60
IUUC-Cho-024743	Choloepus hoffmanni	35.09	1.00e-05	45.10
IUUC-Cin-025731	Ciona intestinalis	25.10	2.00e-18	85.50
IUUC-Csv-026036	Ciona savignyi	22.50	9.00e-23	102.00
IUUC-Dre-027886	Danio rerio	27.76	5.00e-18	86.70
IUUC-Dno-029866	Dasypus novemcinctus	26.02	8.00e-15	75.90
IUUC-Dor-031024	Dipodomys ordii	26.83	3.00e-17	84.00
IUUC-Dme-031607	Drosophila melanogaster	23.63	3.00e-18	87.40
IUUC-Ete-032893	Echinops telfairi	26.91	3.00e-17	84.00
IUUC-Fca-036249	Felis catus	26.83	3.00e-17	84.00
IUUC-Fal-036761	Ficedula albicollis	28.00	2.00e-17	84.70
IUUC-Gmo-039272	Gadus morhua	25.31	1.00e-16	82.00
IUUC-Gga-040415	Gallus gallus	27.71	2.00e-17	84.30
IUUC-Gac-041391	Gasterosteus aculeatus	29.15	6.00e-17	82.80
IUUC-Ggo-045391	Gorilla gorilla	26.83	3.00e-17	84.00
IUUC-Hsa-045903	Homo sapiens	26.83	3.00e-17	84.00
IUUC-Lpe-051019	Leersia perrieri	42.19	0.00e+00	699.00
IUUC-Loc-052677	Lepisosteus oculatus	28.16	4.00e-18	87.00
IUUC-Lma-053029	Leptosphaeria maculans	22.86	6.00e-14	72.80
IUUC-Laf-053723	Loxodonta africana	26.94	3.00e-17	83.20
IUUC-Mcc-055526	Macaca mulatta	26.83	3.00e-17	84.00
IUUC-Mpo-057585	Magnaporthe poae	20.09	9.00e-12	65.50
IUUC-Mtr-057936	Medicago truncatula	60.17	0.00e+00	1159.00
IUUC-Mga-059965	Meleagris gallopavo	25.11	5.00e-08	53.10
IUUC-Mmr-061246	Microcebus murinus	26.80	3.00e-17	84.00
IUUC-Mdo-062626	Monodelphis domestica	27.60	7.00e-18	86.30
IUUC-Mmu-063848	Mus musculus	27.14	3.00e-17	84.00
IUUC-Mlu-067504	Myotis lucifugus	26.51	3.00e-17	84.00
IUUC-Ncr-068624	Neurospora crassa	20.85	5.00e-11	63.20
IUUC-Nle-069640	Nomascus leucogenys	26.83	3.00e-17	84.00
IUUC-Opr-070681	Ochotona princeps	23.85	2.00e-13	71.20
IUUC-Ont-072051	Oreochromis niloticus	26.47	4.00e-17	83.60
IUUC-Oan-073349	Ornithorhynchus anatinus	25.73	9.00e-16	76.60
IUUC-Ocu-074803	Oryctolagus cuniculus	26.83	4.00e-17	84.00
IUUC-Oba-075817	Oryza barthii	41.18	0.00e+00	722.00
IUUC-Obr-076813	Oryza brachyantha	42.97	0.00e+00	742.00
IUUC-Ogl-077896	Oryza glaberrima	42.76	0.00e+00	759.00
IUUC-Ogu-078104	Oryza glumaepatula	40.07	5.00e-170	590.00
IUUC-Oin-079712	Oryza indica	42.76	0.00e+00	760.00
IUUC-Olo-081006	Oryza longistaminata	33.56	6.00e-130	457.00
IUUC-Ome-081753	Oryza meridionalis	40.99	0.00e+00	716.00
IUUC-Oni-082419	Oryza nivara	41.28	0.00e+00	725.00
IUUC-Opu-083377	Oryza punctata	42.38	0.00e+00	743.00
IUUC-Oru-085098	Oryza rufipogon	40.90	0.00e+00	710.00
IUUC-Osa-085420	Oryza sativa	42.48	0.00e+00	754.00
IUUC-Ola-087197	Oryzias latipes	25.60	5.00e-07	50.10
IUUC-Oga-088333	Otolemur garnettii	26.91	3.00e-17	84.00
IUUC-Oar-090222	Ovis aries	26.40	2.00e-15	77.80
IUUC-Ptr-091012	Pan troglodytes	26.83	3.00e-17	84.00
IUUC-Pan-091748	Papio anubis	26.72	8.00e-16	79.30
IUUC-Psi-093405	Pelodiscus sinensis	28.16	2.00e-17	85.10
IUUC-Pno-095147	Phaeosphaeria nodorum	22.22	8.00e-09	55.80
IUUC-Pfo-096618	Poecilia formosa	22.45	4.00e-21	96.70
IUUC-Pab-098201	Pongo abelii	26.83	3.00e-17	84.00
IUUC-Pca-101111	Procavia capensis	24.18	4.00e-15	77.00
IUUC-Ppe-101373	Prunus persica	66.19	0.00e+00	1321.00
IUUC-Pva-102580	Pteropus vampyrus	23.98	2.00e-10	61.60
IUUC-Pte-104412	Pyrenophora teres	22.80	8.00e-13	68.90
IUUC-Pyt-104770	Pyrenophora triticirepentis	22.49	2.00e-11	64.70
IUUC-Rno-106102	Rattus norvegicus	27.20	2.00e-17	84.30
IUUC-Sly-111741	Solanum lycopersicum	57.71	0.00e+00	1141.00
IUUC-Ssc-115307	Sus scrofa	27.24	2.00e-17	84.30
IUUC-Tgu-116507	Taeniopygia guttata	28.00	2.00e-17	84.30
IUUC-Tsy-119133	Tarsius syrichta	28.14	2.00e-16	81.30
IUUC-Tni-120362	Tetraodon nigroviridis	22.55	9.00e-18	85.90
IUUC-Tre-122192	Trichoderma reesei	19.42	2.00e-12	67.80
IUUC-Tvi-122424	Trichoderma virens	20.25	5.00e-13	69.70
IUUC-Tae-125204	Triticum aestivum	42.29	0.00e+00	720.00
IUUC-Tbe-127510	Tupaia belangeri	25.73	2.00e-13	71.20
IUUC-Ttr-128804	Tursiops truncatus	26.53	3.00e-16	80.90
IUUC-Xtr-132634	Xenopus tropicalis	23.75	3.00e-12	67.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence