iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093605

Ensembl Protein ID

ENSPSIP00000004365.1

UniProt Accession

K7F8K5; K7F8K5_PELSI

Genbank Protein ID

ENSPSIP00000004365

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01157061

Gene Name

RBBP6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000004108.1	ENSPSIT00000004388.1	ENSPSIP00000004365.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.00e-10	38.9	217	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwl.asggktcPvtrqpl.teedlvPnltlrrliqawceen 72
           +p+e+lC I +++M+d vv+p +G +y  ++I+  l +s ++tcP+++q+  +++ l+ n++lr+ ++++ +e 
   Q: 217  IPDELLCLICKDIMNDAVVIPcCGNSYCDECIRTSLlESEEHTCPTCHQTDvSPDALIANKFLRQAVNNFKNET 290
           8********************************999456666*****9986599999*********99998765 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MFFLFSEYTD DSALIPKNSS VIVRRIPIGG VKSTNKTYVM TPKPHKILET SFRSRTEPVS 60
GTSKAIDDSS ASISLAQLAK TANLAEANAS EEDKIKAMMS QSGHEYDPSN YMKKPLGPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTTTCC TTTTTTCAGA GTACACGGAT GATAGTGCCC TGATTCCCAA GAACTCATCT 60
GTAATTGTTA GAAGAATCCC AATTGGAGGA GTTAAATCTA CAAACAAAAC ATATGTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014891--DWNN_domain
IPR033489--RBBP6
IPR003613--Ubox_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN
PS51698--U_BOX
PS50158--ZF_CCHC
PS50089--ZF_RING_2

Pfam

PF08783--DWNN
PF04564--U-box
PF13696--zf-CCHC_2

SMART

SM00184--RING
SM00343--ZnF_C2HC

Gene Ontology

GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0048568--P:embryonic organ development
GO:0006397--P:mRNA processing
GO:0035264--P:multicellular organism growth
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0006275--P:regulation of DNA replication
GO:0061053--P:somite development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000195	Aegilops tauschii	29.81	3.00e-17	83.60
IUUC-Aml-001655	Ailuropoda melanoleuca	68.61	0.00e+00	800.00
IUUC-Atr-002768	Amborella trichopoda	38.69	2.00e-18	87.00
IUUC-Apl-004100	Anas platyrhynchos	79.65	0.00e+00	1097.00
IUUC-Aca-004345	Anolis carolinensis	67.31	1.00e-118	421.00
IUUC-Aly-006444	Arabidopsis lyrata	32.09	7.00e-31	129.00
IUUC-Ath-007648	Arabidopsis thaliana	30.53	1.00e-29	124.00
IUUC-Ago-007949	Ashbya gossypii	28.33	1.00e-23	103.00
IUUC-Acl-008118	Aspergillus clavatus	30.91	6.00e-18	85.50
IUUC-Afl-008408	Aspergillus flavus	29.56	9.00e-15	74.70
IUUC-Afu-008777	Aspergillus fumigatus	26.92	3.00e-24	106.00
IUUC-Ani-009426	Aspergillus nidulans	26.99	2.00e-23	103.00
IUUC-Ang-009735	Aspergillus niger	27.10	6.00e-20	92.00
IUUC-Aor-010213	Aspergillus oryzae	27.42	1.00e-23	104.00
IUUC-Ate-010474	Aspergillus terreus	27.84	4.00e-23	102.00
IUUC-Ame-010679	Astyanax mexicanus	77.05	2.00e-128	454.00
IUUC-Bgr-012229	Blumeria graminis	36.31	2.00e-26	114.00
IUUC-Bta-012672	Bos taurus	69.09	0.00e+00	904.00
IUUC-Bci-013880	Botrytis cinerea	28.19	3.00e-26	113.00
IUUC-Bdi-014276	Brachypodium distachyon	38.10	7.00e-18	86.30
IUUC-Bol-015602	Brassica oleracea	30.50	8.00e-30	125.00
IUUC-Bra-016670	Brassica rapa	31.88	2.00e-29	124.00
IUUC-Cel-018532	Caenorhabditis elegans	34.01	4.00e-36	147.00
IUUC-Cja-018843	Callithrix jacchus	69.63	0.00e+00	931.00
IUUC-Cfa-021107	Canis familiaris	69.37	0.00e+00	894.00
IUUC-Csa-023397	Chlorocebus sabaeus	69.74	0.00e+00	971.00
IUUC-Cho-024327	Choloepus hoffmanni	70.92	6.00e-156	545.00
IUUC-Cin-025439	Ciona intestinalis	41.21	4.00e-27	114.00
IUUC-Csv-026162	Ciona savignyi	54.55	2.00e-56	211.00
IUUC-Cgl-026629	Colletotrichum gloeosporioides	32.93	3.00e-22	100.00
IUUC-Cne-026921	Cryptococcus neoformans	26.79	4.00e-26	112.00
IUUC-Cme-027244	Cyanidioschyzon merolae	42.03	7.00e-10	59.70
IUUC-Dre-028023	Danio rerio	75.77	2.00e-123	437.00
IUUC-Dno-029430	Dasypus novemcinctus	69.82	0.00e+00	922.00
IUUC-Dor-030406	Dipodomys ordii	65.47	0.00e+00	852.00
IUUC-Dse-031312	Dothistroma septosporum	30.27	1.00e-29	124.00
IUUC-Dme-032133	Drosophila melanogaster	37.37	2.00e-51	197.00
IUUC-Ete-032466	Echinops telfairi	66.34	0.00e+00	846.00
IUUC-Eca-034174	Equus caballus	66.71	0.00e+00	705.00
IUUC-Eeu-034677	Erinaceus europaeus	71.09	7.00e-162	565.00
IUUC-Fca-035439	Felis catus	69.46	0.00e+00	855.00
IUUC-Fal-037230	Ficedula albicollis	74.80	0.00e+00	889.00
IUUC-Fox-037976	Fusarium oxysporum	27.81	2.00e-24	107.00
IUUC-Fso-038202	Fusarium solani	25.82	6.00e-24	105.00
IUUC-Gmo-038618	Gadus morhua	66.99	1.00e-77	282.00
IUUC-Ggr-040035	Gaeumannomyces graminis	26.55	1.00e-24	107.00
IUUC-Gga-040908	Gallus gallus	81.19	0.00e+00	939.00
IUUC-Gac-041718	Gasterosteus aculeatus	71.04	2.00e-87	315.00
IUUC-Gma-044229	Glycine max	29.52	1.00e-28	121.00
IUUC-Ggo-044567	Gorilla gorilla	70.39	0.00e+00	913.00
IUUC-Hsa-046849	Homo sapiens	70.50	0.00e+00	915.00
IUUC-Hvu-047050	Hordeum vulgare	26.86	5.00e-19	89.40
IUUC-Itr-048832	Ictidomys tridecemlineatus	68.96	0.00e+00	853.00
IUUC-Kpa-049323	Komagataella pastoris	28.94	1.00e-21	96.70
IUUC-Lch-050524	Latimeria chalumnae	55.01	4.00e-180	625.00
IUUC-Lpe-050947	Leersia perrieri	34.73	2.00e-18	87.40
IUUC-Loc-052709	Lepisosteus oculatus	80.20	4.00e-126	446.00
IUUC-Lma-053186	Leptosphaeria maculans	29.37	2.00e-26	113.00
IUUC-Laf-054472	Loxodonta africana	69.88	0.00e+00	919.00
IUUC-Mcc-055743	Macaca mulatta	69.63	0.00e+00	966.00
IUUC-Meu-056399	Macropus eugenii	73.59	3.00e-138	486.00
IUUC-Mor-057073	Magnaporthe oryzae	27.57	3.00e-24	106.00
IUUC-Mpo-057378	Magnaporthe poae	25.35	3.00e-24	106.00
IUUC-Mtr-058761	Medicago truncatula	29.56	1.00e-20	95.10
IUUC-Mla-058840	Melampsora laricipopulina	36.60	7.00e-25	108.00
IUUC-Mga-060129	Meleagris gallopavo	78.16	0.00e+00	1031.00
IUUC-Mvi-060424	Microbotryum violaceum	34.59	4.00e-24	106.00
IUUC-Mmr-061295	Microcebus murinus	69.35	0.00e+00	911.00
IUUC-Mdo-062295	Monodelphis domestica	74.70	0.00e+00	1023.00
IUUC-Mmu-064009	Mus musculus	64.85	0.00e+00	873.00
IUUC-Mac-065479	Musa acuminata	36.21	2.00e-25	111.00
IUUC-Mpu-065875	Mustela putorius furo	69.66	0.00e+00	894.00
IUUC-Mlu-066941	Myotis lucifugus	68.26	0.00e+00	839.00
IUUC-Nfi-068518	Neosartorya fischeri	27.56	3.00e-25	109.00
IUUC-Ncr-068886	Neurospora crassa	26.77	2.00e-23	103.00
IUUC-Nle-069717	Nomascus leucogenys	66.77	0.00e+00	637.00
IUUC-Opr-070280	Ochotona princeps	79.27	2.00e-152	533.00
IUUC-Ont-071462	Oreochromis niloticus	65.65	1.00e-106	382.00
IUUC-Oan-073300	Ornithorhynchus anatinus	73.27	0.00e+00	959.00
IUUC-Ocu-074124	Oryctolagus cuniculus	69.18	0.00e+00	960.00
IUUC-Oba-075756	Oryza barthii	34.73	2.00e-18	87.80
IUUC-Obr-076580	Oryza brachyantha	36.31	2.00e-22	100.00
IUUC-Ogl-077759	Oryza glaberrima	36.90	2.00e-24	107.00
IUUC-Ogu-078657	Oryza glumaepatula	30.43	1.00e-18	88.20
IUUC-Oin-079481	Oryza indica	31.23	3.00e-20	93.60
IUUC-Olo-081062	Oryza longistaminata	36.90	2.00e-23	103.00
IUUC-Ome-081813	Oryza meridionalis	34.73	3.00e-18	87.40
IUUC-Oni-083007	Oryza nivara	34.73	3.00e-18	87.00
IUUC-Opu-083385	Oryza punctata	34.73	5.00e-18	86.30
IUUC-Oru-084861	Oryza rufipogon	34.73	3.00e-18	87.00
IUUC-Osa-085896	Oryza sativa	36.47	1.00e-24	107.00
IUUC-Ola-086693	Oryzias latipes	58.46	4.00e-96	345.00
IUUC-Oga-088262	Otolemur garnettii	69.60	0.00e+00	918.00
IUUC-Oar-089658	Ovis aries	69.04	0.00e+00	982.00
IUUC-Ptr-091311	Pan troglodytes	70.17	0.00e+00	911.00
IUUC-Pan-091925	Papio anubis	69.74	0.00e+00	970.00
IUUC-Pma-094163	Petromyzon marinus	75.57	3.00e-99	353.00
IUUC-Pno-094790	Phaeosphaeria nodorum	33.96	1.00e-19	91.30
IUUC-Ppa-095943	Physcomitrella patens	28.53	2.00e-31	131.00
IUUC-Pfo-096581	Poecilia formosa	64.86	1.00e-101	364.00
IUUC-Pab-098229	Pongo abelii	69.74	0.00e+00	912.00
IUUC-Pop-099598	Populus trichocarpa	31.06	3.00e-28	120.00
IUUC-Pca-100875	Procavia capensis	66.51	3.00e-173	603.00
IUUC-Ppe-101658	Prunus persica	37.06	3.00e-18	87.40
IUUC-Pva-102343	Pteropus vampyrus	67.78	1.00e-163	571.00
IUUC-Pgr-103275	Puccinia graminis	34.23	1.00e-18	88.60
IUUC-Ptt-104004	Puccinia triticina	38.46	2.00e-10	60.50
IUUC-Pte-104161	Pyrenophora teres	32.01	3.00e-25	109.00
IUUC-Pyt-104576	Pyrenophora triticirepentis	32.37	2.00e-25	110.00
IUUC-Rno-105264	Rattus norvegicus	64.34	0.00e+00	818.00
IUUC-Sce-106138	Saccharomyces cerevisiae	28.21	7.00e-26	111.00
IUUC-Sha-107497	Sarcophilus harrisii	74.48	0.00e+00	1033.00
IUUC-Sja-107991	Schizosaccharomyces japonicus	31.05	2.00e-33	136.00
IUUC-Spo-108257	Schizosaccharomyces pombe	30.42	1.00e-35	143.00
IUUC-Ssl-108581	Sclerotinia sclerotiorum	28.24	5.00e-28	119.00
IUUC-Smo-109358	Selaginella moellendorffii	29.81	1.00e-25	110.00
IUUC-Sit-109920	Setaria italica	31.27	2.00e-26	114.00
IUUC-Sly-111616	Solanum lycopersicum	30.70	4.00e-30	126.00
IUUC-Stu-112648	Solanum tuberosum	31.55	2.00e-11	63.50
IUUC-Sar-113120	Sorex araneus	62.18	0.00e+00	758.00
IUUC-Sbi-113881	Sorghum bicolor	38.69	9.00e-27	115.00
IUUC-Sre-115127	Sporisorium reilianum	39.55	1.00e-34	140.00
IUUC-Ssc-116147	Sus scrofa	68.76	0.00e+00	915.00
IUUC-Tgu-117215	Taeniopygia guttata	74.30	0.00e+00	670.00
IUUC-Tru-118525	Takifugu rubripes	60.74	2.00e-105	375.00
IUUC-Tsy-119160	Tarsius syrichta	69.13	0.00e+00	924.00
IUUC-Tni-119816	Tetraodon nigroviridis	68.84	2.00e-83	301.00
IUUC-Tca-121727	Theobroma cacao	30.16	3.00e-20	93.60
IUUC-Tre-122181	Trichoderma reesei	27.27	3.00e-27	116.00
IUUC-Tvi-122316	Trichoderma virens	27.09	6.00e-26	112.00
IUUC-Tae-125227	Triticum aestivum	37.50	2.00e-18	87.80
IUUC-Tur-126827	Triticum urartu	37.50	3.00e-17	83.60
IUUC-Tme-126984	Tuber melanosporum	28.93	9.00e-34	138.00
IUUC-Tbe-127263	Tupaia belangeri	66.21	0.00e+00	693.00
IUUC-Ttr-128498	Tursiops truncatus	68.04	0.00e+00	962.00
IUUC-Uma-129457	Ustilago maydis	29.91	7.00e-35	141.00
IUUC-Vda-129986	Verticillium dahliae	27.24	1.00e-25	110.00
IUUC-Vpa-130795	Vicugna pacos	89.15	2.00e-112	400.00
IUUC-Vvi-131146	Vitis vinifera	36.47	4.00e-18	86.70
IUUC-Xtr-132789	Xenopus tropicalis	84.59	5.00e-134	472.00
IUUC-Xma-133011	Xiphophorus maculatus	63.64	7.00e-101	361.00
IUUC-Yli-134516	Yarrowia lipolytica	27.45	2.00e-24	106.00
IUUC-Zma-134699	Zea mays	37.50	4.00e-25	110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence