iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095783

Ensembl Protein ID

PP1S402_49V6.1

UniProt Accession

A9U0I7; A9U0I7_PHYPA

Genbank Protein ID

EDQ50842.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545287

Gene Name

PHYPADRAFT_173015

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S402_49V6	PP1S402_49V6.1	PP1S402_49V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-39	132.2	182	217
UBD/Beta-Prp	4.20e-60	204.2	260	473

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++af ++   +++Gs D tik+WD  tg 
   Q: 182  GHLGWVRSIAFdPGnEWFCTGSADRTIKIWDSGTGQ 217
           8***********77799**************77765 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdg 138
           ++rs+ gh ++v+++ ++p+ +il+tg++D + +vwd++t  +v +l+ghe++v+s+  ++++  +v+Gshd ti++wdl  g+ ++ tl+ h++
   Q: 260  VIRSYHGHLSGVYCLALHPTLDILMTGGRDSVCRVWDIRTKAQVFALSGHENTVCSVITQATDPQVVTGSHDTTIKLWDLAAGKTMS-TLTFHKK 353
           68999**********************************************************************************.******* PP
   S: 139  vvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght..........d 223
           +v+ +++hp++  + s+s+D++ + ++l+ g+ l+ + +++   v+++s++++ + +vs++++g++ +wd+++g+    ++++t          +
   Q: 354  SVRALAMHPFEHTFTSASADNI-KKFRLPKGDFLHNMLSQQRTIVNCMSINED-NVMVSAGDNGSLWFWDYKSGHN--FQQAQTivqpgsldseA 444
           ********************95.55************9999999*****9997.79****************9974..44444455677888889 PP
   S: 224  nvksvrfspnderlvsgssDgsiriW..d 250
            ++ +  ++ + rl+++ +D++i++W  d
   Q: 445  GIYALSYDQTGSRLITCEADKTIKFWkeD 473
           9*************************322 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MPASGGGSTE VLEAVEPQSL KKLSLKSLKR ALDIFAPTHG DRNGAMPESC KIRISCKVND 60
EYAAVKDMPA ASTRENVGAK PGDNGLQSLR VPGSEQPTTN AGPASGKGGG KQLALVPARA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATTTGGGT TTCGGGAAGG TTTTCGGAGG GTTTAGACAA GTGGTCATTG TTGTTGTAGA 60
GGGTGTGTGT GTTGTTTTTG TTTGCATGTT AGGGTTCGGA TCATCGCCAT AGCCGTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ppp:PHYPADRAFT_173015

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ate-010351	Aspergillus terreus	60.17	3.00e-128	451.00
IUUC-Ame-011613	Astyanax mexicanus	37.58	4.00e-77	281.00
IUUC-Cpo-021458	Cavia porcellus	48.15	4.00e-133	467.00
IUUC-Csv-026367	Ciona savignyi	63.35	3.00e-129	454.00
IUUC-Cme-027233	Cyanidioschyzon merolae	28.66	3.00e-29	122.00
IUUC-Dre-028260	Danio rerio	50.92	2.00e-135	475.00
IUUC-Dse-031493	Dothistroma septosporum	50.33	5.00e-126	443.00
IUUC-Eeu-035249	Erinaceus europaeus	52.14	4.00e-103	367.00
IUUC-Gmo-039133	Gadus morhua	50.21	4.00e-135	474.00
IUUC-Gac-042344	Gasterosteus aculeatus	49.69	4.00e-133	467.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	48.34	4.00e-133	467.00
IUUC-Lpe-051442	Leersia perrieri	68.26	0.00e+00	644.00
IUUC-Laf-053471	Loxodonta africana	48.18	3.00e-132	464.00
IUUC-Mmr-061018	Microcebus murinus	48.54	5.00e-133	467.00
IUUC-Mlu-067361	Myotis lucifugus	48.99	1.00e-131	462.00
IUUC-Opr-070462	Ochotona princeps	61.05	3.00e-100	358.00
IUUC-Ont-071365	Oreochromis niloticus	51.12	3.00e-134	471.00
IUUC-Oan-072708	Ornithorhynchus anatinus	47.70	2.00e-132	465.00
IUUC-Ocu-074594	Oryctolagus cuniculus	48.15	3.00e-133	467.00
IUUC-Ola-086655	Oryzias latipes	50.31	4.00e-134	470.00
IUUC-Oar-090185	Ovis aries	48.63	7.00e-132	463.00
IUUC-Pma-094638	Petromyzon marinus	49.18	1.00e-133	469.00
IUUC-Pca-100909	Procavia capensis	46.24	2.00e-102	365.00
IUUC-Sce-106204	Saccharomyces cerevisiae	53.64	8.00e-105	373.00
IUUC-Tni-119847	Tetraodon nigroviridis	49.48	4.00e-133	467.00
IUUC-Ttr-128933	Tursiops truncatus	49.29	2.00e-133	468.00
IUUC-Xtr-132409	Xenopus tropicalis	48.73	1.00e-132	465.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence