iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dno-029492

Ensembl Protein ID

ENSDNOP00000029074.1

UniProt Accession

C1FY33; C1FY33_DASNO

Genbank Protein ID

ACO88988.1

Protein Name

Tripartite motif-containing 6 isoform 2 (Predicted)

Genbank Nucleotide ID

DP001094

Gene Name

TRIM6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDNOG00000038027.1	ENSDNOT00000042226.1	ENSDNOP00000029074.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-12	48.1	20	90
E3 activity/RING/RING	1.10e-13	51.9	26	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPnltlrrliq 66
           + +e  CpI l+l  +P  + +G+++ +++I      +++        +cPv+r++ ++++l Pn  l ++++
   Q: 20   IRDEVTCPICLDLLMEPLSIDCGHSFCQACITGNS--KQSqisqegesSCPVCRTSYQPDNLRPNRHLANIVE 90
           668999*************************8854..22234666667*****************99988776 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl..qkwpglknssskefrCPlCr 46
           C+iCl+ +++ pl+ +CgH f++ C+  +  ++++ s+ +e +CP+Cr
   Q: 26   CPICLDLLME-PLSIDCGHSFCQACItgNS-KQSQISQEGESSCPVCR 71
           **********.***************8544.48999***********8 PP

Organism

Dasypus novemcinctus

Protein Sequence
(Fasta)

GRSGRSQKIT AMTSAVLVDI RDEVTCPICL DLLMEPLSID CGHSFCQACI TGNSKQSQIS 60
QEGESSCPVC RTSYQPDNLR PNRHLANIVE RLREVVLGPG RQSKLILCAQ HGEKLQLFCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACCCTATCA GCCGCATTCC CTCCGCTCAC CCCGCCCCTC TCCCCCAGGG TCTCTCTGAT 60
TTGGTGGCGG CGAGGCCTCC GCAGACCTTC GGCTCTGATC CAGGCCACAG ATCCCAGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR010908--Longin_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001965	Ailuropoda melanoleuca	81.73	5.00e-136	477.00
IUUC-Bta-013071	Bos taurus	61.92	0.00e+00	917.00
IUUC-Cja-018923	Callithrix jacchus	57.58	0.00e+00	753.00
IUUC-Cfa-021152	Canis familiaris	61.30	0.00e+00	937.00
IUUC-Cpo-021369	Cavia porcellus	49.79	7.00e-117	414.00
IUUC-Csa-023747	Chlorocebus sabaeus	58.76	0.00e+00	684.00
IUUC-Cho-024416	Choloepus hoffmanni	69.41	1.00e-101	363.00
IUUC-Dor-030480	Dipodomys ordii	77.12	2.00e-134	473.00
IUUC-Ete-032316	Echinops telfairi	49.88	0.00e+00	715.00
IUUC-Eca-034130	Equus caballus	62.80	0.00e+00	928.00
IUUC-Eeu-034968	Erinaceus europaeus	49.09	8.00e-101	360.00
IUUC-Fca-035533	Felis catus	83.72	3.00e-139	488.00
IUUC-Ggo-045449	Gorilla gorilla	54.38	0.00e+00	747.00
IUUC-Hsa-046123	Homo sapiens	62.58	0.00e+00	932.00
IUUC-Hvu-047732	Hordeum vulgare	42.37	2.00e-08	52.80
IUUC-Itr-048069	Ictidomys tridecemlineatus	52.00	7.00e-127	447.00
IUUC-Laf-053805	Loxodonta africana	52.94	3.00e-128	452.00
IUUC-Mcc-055647	Macaca mulatta	61.18	0.00e+00	879.00
IUUC-Mga-060031	Meleagris gallopavo	29.44	1.00e-74	274.00
IUUC-Mmr-060724	Microcebus murinus	46.18	1.00e-156	547.00
IUUC-Mmu-063682	Mus musculus	53.75	7.00e-140	490.00
IUUC-Mpu-065842	Mustela putorius furo	81.40	2.00e-136	479.00
IUUC-Mlu-067658	Myotis lucifugus	62.80	0.00e+00	937.00
IUUC-Nle-069376	Nomascus leucogenys	59.86	0.00e+00	850.00
IUUC-Opr-071057	Ochotona princeps	48.86	2.00e-109	389.00
IUUC-Ocu-073956	Oryctolagus cuniculus	62.53	0.00e+00	941.00
IUUC-Oga-088267	Otolemur garnettii	55.06	1.00e-138	486.00
IUUC-Oar-090073	Ovis aries	52.10	4.00e-131	461.00
IUUC-Ptr-090573	Pan troglodytes	55.17	2.00e-144	505.00
IUUC-Pan-092745	Papio anubis	55.17	1.00e-142	499.00
IUUC-Pab-098713	Pongo abelii	62.33	0.00e+00	926.00
IUUC-Pca-100258	Procavia capensis	51.92	6.00e-138	484.00
IUUC-Pva-102482	Pteropus vampyrus	52.37	3.00e-156	545.00
IUUC-Rno-105401	Rattus norvegicus	53.75	8.00e-140	490.00
IUUC-Sha-107352	Sarcophilus harrisii	25.40	6.00e-63	235.00
IUUC-Sar-113094	Sorex araneus	47.43	2.00e-96	345.00
IUUC-Ssc-115780	Sus scrofa	56.07	0.00e+00	774.00
IUUC-Tsy-119181	Tarsius syrichta	79.74	2.00e-126	446.00
IUUC-Tur-126362	Triticum urartu	35.71	6.00e-09	55.10
IUUC-Tbe-127868	Tupaia belangeri	49.70	2.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence