iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000035126.19	ENSMUST00000116316.9	ENSMUSP00000112018.3
ENSMUSG00000035126.19	ENSMUST00000106868.3	ENSMUSP00000102481.3
ENSMUSG00000035126.19	ENSMUST00000148673.1	ENSMUSP00000119752.1
ENSMUSG00000035126.19	ENSMUST00000036557.14	ENSMUSP00000042272.8

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-11	45.1	496	527

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
            +vt+++f  s+ +ll++G ++gt+ ++++ +
   Q: 496  YGVTSVDFsnSSpNLLAVGYHNGTVAIYNVQS 527
           57*******8557****************865 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MHSSPTSTRK QASFAASASA QPRKSISFIN PSKSSAGKGY AASNPNKLAV SRTMGFLTDM 60
KPAEKLNVPS AKTVQVLDSK GVDVTPRPLY HPDPHAASAK PNKLLTSQEG SLGSDYISSY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGATGGGTA AGATGGTCTG TGGAGGCTGC ACTTACAGCC GCCGCTGCTG CCGCCGCCTC 60
CGCTGCTGCC GCCGCCGCCT GGAGACGCCC CATCCATCCG CCTGCAGCCG GGAGACTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

mmu:242584

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	73.26	0.00e+00	1100.00
IUUC-Apl-004037	Anas platyrhynchos	52.84	0.00e+00	776.00
IUUC-Aca-004686	Anolis carolinensis	53.12	0.00e+00	777.00
IUUC-Ame-010641	Astyanax mexicanus	44.81	4.00e-171	595.00
IUUC-Bta-012779	Bos taurus	72.97	0.00e+00	1134.00
IUUC-Cja-019217	Callithrix jacchus	73.22	0.00e+00	1140.00
IUUC-Cfa-020613	Canis familiaris	73.32	0.00e+00	1136.00
IUUC-Cpo-022374	Cavia porcellus	72.92	0.00e+00	1136.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	39.39	7.00e-67	249.00
IUUC-Csa-023471	Chlorocebus sabaeus	72.22	0.00e+00	1138.00
IUUC-Cho-024485	Choloepus hoffmanni	64.55	0.00e+00	932.00
IUUC-Cin-025295	Ciona intestinalis	42.97	5.00e-162	565.00
IUUC-Csv-025888	Ciona savignyi	43.88	6.00e-165	574.00
IUUC-Dre-027657	Danio rerio	44.81	4.00e-180	625.00
IUUC-Dno-029422	Dasypus novemcinctus	67.66	0.00e+00	1023.00
IUUC-Ete-032340	Echinops telfairi	58.08	8.00e-109	388.00
IUUC-Eca-033418	Equus caballus	75.79	0.00e+00	1103.00
IUUC-Eeu-035088	Erinaceus europaeus	70.18	2.00e-82	300.00
IUUC-Fca-035471	Felis catus	73.15	0.00e+00	1106.00
IUUC-Fal-036908	Ficedula albicollis	48.86	5.00e-160	558.00
IUUC-Gmo-038672	Gadus morhua	36.58	2.00e-76	280.00
IUUC-Gga-040422	Gallus gallus	50.07	0.00e+00	711.00
IUUC-Gac-042448	Gasterosteus aculeatus	40.21	7.00e-152	531.00
IUUC-Ggo-045567	Gorilla gorilla	74.46	0.00e+00	1061.00
IUUC-Hsa-046857	Homo sapiens	73.16	0.00e+00	1146.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	79.88	0.00e+00	785.00
IUUC-Lch-050496	Latimeria chalumnae	52.75	0.00e+00	773.00
IUUC-Loc-052759	Lepisosteus oculatus	53.68	0.00e+00	759.00
IUUC-Laf-053515	Loxodonta africana	74.87	0.00e+00	1163.00
IUUC-Mcc-054741	Macaca mulatta	73.50	0.00e+00	1149.00
IUUC-Meu-056698	Macropus eugenii	76.16	1.00e-136	479.00
IUUC-Mga-059689	Meleagris gallopavo	50.81	0.00e+00	723.00
IUUC-Mmr-061641	Microcebus murinus	67.58	0.00e+00	790.00
IUUC-Mdo-061968	Monodelphis domestica	62.42	0.00e+00	937.00
IUUC-Mpu-065957	Mustela putorius furo	72.64	0.00e+00	1083.00
IUUC-Mlu-067454	Myotis lucifugus	68.91	0.00e+00	1052.00
IUUC-Nle-069312	Nomascus leucogenys	74.08	0.00e+00	1162.00
IUUC-Opr-070363	Ochotona princeps	72.04	0.00e+00	684.00
IUUC-Ont-072322	Oreochromis niloticus	39.17	4.00e-143	501.00
IUUC-Oan-073666	Ornithorhynchus anatinus	59.79	0.00e+00	840.00
IUUC-Ocu-074719	Oryctolagus cuniculus	73.16	0.00e+00	1182.00
IUUC-Ola-087351	Oryzias latipes	45.13	1.00e-77	283.00
IUUC-Olu-087835	Ostreococcus lucimarinus	30.69	3.00e-40	159.00
IUUC-Oga-088476	Otolemur garnettii	69.14	0.00e+00	978.00
IUUC-Oar-089261	Ovis aries	74.05	0.00e+00	1126.00
IUUC-Pan-091774	Papio anubis	73.44	0.00e+00	1151.00
IUUC-Psi-093526	Pelodiscus sinensis	71.51	7.00e-166	577.00
IUUC-Pma-094755	Petromyzon marinus	51.01	2.00e-71	261.00
IUUC-Ppa-095355	Physcomitrella patens	49.68	6.00e-42	164.00
IUUC-Pfo-096510	Poecilia formosa	40.83	5.00e-143	501.00
IUUC-Pab-098218	Pongo abelii	74.12	0.00e+00	1139.00
IUUC-Pva-102551	Pteropus vampyrus	80.47	0.00e+00	639.00
IUUC-Rno-105674	Rattus norvegicus	85.09	0.00e+00	1311.00
IUUC-Sha-107552	Sarcophilus harrisii	62.61	0.00e+00	964.00
IUUC-Smo-109353	Selaginella moellendorffii	41.50	5.00e-67	247.00
IUUC-Sar-113136	Sorex araneus	66.08	0.00e+00	878.00
IUUC-Ssc-116203	Sus scrofa	75.64	0.00e+00	962.00
IUUC-Tgu-117141	Taeniopygia guttata	49.01	4.00e-170	591.00
IUUC-Tni-119670	Tetraodon nigroviridis	39.19	4.00e-91	329.00
IUUC-Tbe-127913	Tupaia belangeri	75.93	0.00e+00	719.00
IUUC-Ttr-128515	Tursiops truncatus	67.03	0.00e+00	986.00
IUUC-Vpa-130560	Vicugna pacos	73.56	8.00e-172	597.00
IUUC-Xtr-131755	Xenopus tropicalis	53.48	0.00e+00	767.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence