iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015983

Ensembl Protein ID

Bo8g052920.1

UniProt Accession

A0A0D3DN70; A0A0D3DN70_BRAOL

Protein Name

E3 ubiquitin-protein ligase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g052920	Bo8g052920.1	Bo8g052920.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	89.88	2.00e-171	598.00	IUUC-Ath-007192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica oleracea

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

METESMDRES STRSIPNDNE AYHFSSTKNH AGAAAAVVTN IVGPTSTAAA TSVYELLECP 60
VCTFSMYPPI HQCHNGHTLC STCKVRVHNR CPTCRQELGD IRCLALEKVA ESLELPCKYY 120

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Nucleotide Sequence
(Fasta)

ATGGAGACGG AGAGTATGGA TCGCGAATCG TCGACGAGAA GCATCCCTAA CGATAACGAA 60
GCTTACCATT TCTCTTCCAC GAAGAATCAC GCCGGAGCTG CCGCCGCCGT CGTTACCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006522	Arabidopsis lyrata	90.18	6.00e-173	599.00
IUUC-Ath-007192	Arabidopsis thaliana	89.88	1.00e-172	598.00
IUUC-Bdi-014729	Brachypodium distachyon	87.50	3.00e-148	517.00
IUUC-Bra-016910	Brassica rapa	96.57	0.00e+00	649.00
IUUC-Cho-024933	Choloepus hoffmanni	35.74	4.00e-37	147.00
IUUC-Dor-030489	Dipodomys ordii	30.81	1.00e-19	89.00
IUUC-Gmo-039091	Gadus morhua	34.90	4.00e-36	144.00
IUUC-Meu-055922	Macropus eugenii	35.34	4.00e-36	144.00
IUUC-Mtr-058699	Medicago truncatula	78.15	1.00e-152	531.00
IUUC-Mdo-061971	Monodelphis domestica	36.14	2.00e-37	149.00
IUUC-Mac-065670	Musa acuminata	78.19	1.00e-151	528.00
IUUC-Opr-070341	Ochotona princeps	26.58	2.00e-12	65.90
IUUC-Oba-075289	Oryza barthii	87.11	4.00e-137	480.00
IUUC-Obr-076037	Oryza brachyantha	77.98	1.00e-131	462.00
IUUC-Ogl-077148	Oryza glaberrima	80.92	1.00e-131	462.00
IUUC-Oin-079325	Oryza indica	80.92	1.00e-131	462.00
IUUC-Oni-082163	Oryza nivara	80.92	1.00e-131	462.00
IUUC-Oru-084833	Oryza rufipogon	80.92	1.00e-131	462.00
IUUC-Osa-085316	Oryza sativa	80.92	1.00e-131	462.00
IUUC-Oga-088114	Otolemur garnettii	35.69	2.00e-42	165.00
IUUC-Pop-100033	Populus trichocarpa	88.85	1.00e-153	535.00
IUUC-Pca-100328	Procavia capensis	34.54	4.00e-34	138.00
IUUC-Ppe-101960	Prunus persica	89.05	2.00e-156	544.00
IUUC-Pva-103132	Pteropus vampyrus	24.54	3.00e-11	61.60
IUUC-Sly-111259	Solanum lycopersicum	84.59	1.00e-146	511.00
IUUC-Stu-112571	Solanum tuberosum	85.30	6.00e-148	516.00
IUUC-Sbi-114035	Sorghum bicolor	78.34	2.00e-132	464.00
IUUC-Ssc-116441	Sus scrofa	35.74	4.00e-37	147.00
IUUC-Tca-121517	Theobroma cacao	78.11	5.00e-156	543.00
IUUC-Tur-126259	Triticum urartu	79.85	7.00e-131	459.00
IUUC-Vpa-130799	Vicugna pacos	31.58	1.00e-18	85.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence