iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115256

Ensembl Protein ID

ENSSSCP00000010803.2

UniProt Accession

F1RK57; F1RK57_PIG

Genbank Protein ID

ENSSSCP00000010803

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CT737290

Gene Name

GNB1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000010130.2	ENSSSCT00000011091.2	ENSSSCP00000010803.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-22	78.4	260	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDl 30
           H++ v+c+af  d ll++Gs+D+ i +W+l
   Q: 260  HSATVHCVAFaADSLLAAGSGDHRISIWSL 289
           99*********778**************96 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MADLPLPPPD PQFVLRGTQS AVHALHFCGG AQGQGCPLLL SGSLRGLVHI WSLQTRRVVA 60
TLDGHGGQCV TWLQTLPQGP QLLSQGRDLK LCLWDLAEGR NTVVDSVHLE SVGFCRGSIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAAGCGC TTGCGCGGCC GCGGCCCCAC AGTTCAGGGC GCAGGCGCGG CGTGGCCAGG 60
GTGGGTGGGT AGCTTGGGGT GCGCCGGGAG CCGGCGCGGG GACTCACGGG GTGGCCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0035176--P:social behavior

KEGG

ssc:100153889

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	35.20	5.00e-25	108.00
IUUC-Aml-001556	Ailuropoda melanoleuca	78.91	2.00e-130	457.00
IUUC-Atr-002691	Amborella trichopoda	45.64	9.00e-32	130.00
IUUC-Apl-003227	Anas platyrhynchos	54.35	3.00e-91	328.00
IUUC-Aly-006168	Arabidopsis lyrata	39.19	7.00e-29	120.00
IUUC-Ath-007145	Arabidopsis thaliana	39.19	3.00e-28	118.00
IUUC-Afl-008655	Aspergillus flavus	22.34	6.00e-11	61.60
IUUC-Ang-009760	Aspergillus niger	35.78	4.00e-09	55.50
IUUC-Bgr-012119	Blumeria graminis	23.46	2.00e-12	66.20
IUUC-Bta-012556	Bos taurus	71.43	3.00e-118	417.00
IUUC-Bdi-014151	Brachypodium distachyon	41.89	1.00e-22	100.00
IUUC-Bol-016319	Brassica oleracea	43.24	2.00e-30	126.00
IUUC-Bra-016675	Brassica rapa	41.89	7.00e-30	124.00
IUUC-Cja-019523	Callithrix jacchus	74.12	3.00e-124	437.00
IUUC-Cfa-021217	Canis familiaris	79.81	2.00e-133	468.00
IUUC-Cpo-021506	Cavia porcellus	73.08	2.00e-114	404.00
IUUC-Csa-023674	Chlorocebus sabaeus	74.76	2.00e-125	441.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	29.11	3.00e-10	58.90
IUUC-Cme-027295	Cyanidioschyzon merolae	33.95	6.00e-10	58.20
IUUC-Dre-027592	Danio rerio	44.62	3.00e-68	251.00
IUUC-Dno-029880	Dasypus novemcinctus	61.46	4.00e-95	340.00
IUUC-Dor-030266	Dipodomys ordii	78.43	2.00e-68	251.00
IUUC-Dse-031212	Dothistroma septosporum	24.26	8.00e-15	74.30
IUUC-Dme-032209	Drosophila melanogaster	34.19	3.00e-21	95.50
IUUC-Eca-033371	Equus caballus	78.91	3.00e-131	461.00
IUUC-Fca-035558	Felis catus	77.32	5.00e-130	456.00
IUUC-Fal-036794	Ficedula albicollis	50.94	2.00e-86	311.00
IUUC-Gmo-038742	Gadus morhua	43.49	2.00e-61	228.00
IUUC-Gga-040868	Gallus gallus	52.34	1.00e-87	316.00
IUUC-Gac-041646	Gasterosteus aculeatus	44.27	3.00e-66	244.00
IUUC-Gma-044269	Glycine max	39.19	5.00e-27	114.00
IUUC-Ggo-044553	Gorilla gorilla	75.40	2.00e-126	444.00
IUUC-Hsa-046217	Homo sapiens	75.48	2.00e-126	444.00
IUUC-Hvu-047647	Hordeum vulgare	42.57	3.00e-28	119.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	74.20	2.00e-126	444.00
IUUC-Lch-050134	Latimeria chalumnae	51.10	7.00e-84	303.00
IUUC-Lpe-051524	Leersia perrieri	43.06	9.00e-29	120.00
IUUC-Loc-051757	Lepisosteus oculatus	53.16	8.00e-46	177.00
IUUC-Laf-053733	Loxodonta africana	72.78	6.00e-125	439.00
IUUC-Mcc-055477	Macaca mulatta	75.18	2.00e-112	397.00
IUUC-Meu-056758	Macropus eugenii	63.28	4.00e-36	144.00
IUUC-Mtr-058616	Medicago truncatula	40.54	6.00e-29	121.00
IUUC-Mga-059637	Meleagris gallopavo	48.07	8.00e-55	206.00
IUUC-Mvi-060385	Microbotryum violaceum	26.90	6.00e-13	68.20
IUUC-Mmr-061675	Microcebus murinus	71.66	2.00e-116	411.00
IUUC-Mdo-062782	Monodelphis domestica	60.69	1.00e-96	345.00
IUUC-Mmu-064058	Mus musculus	69.97	6.00e-119	419.00
IUUC-Mac-065262	Musa acuminata	38.93	1.00e-25	110.00
IUUC-Mpu-066633	Mustela putorius furo	79.55	1.00e-123	436.00
IUUC-Mlu-067333	Myotis lucifugus	78.73	2.00e-129	454.00
IUUC-Nfi-068581	Neosartorya fischeri	33.11	1.00e-11	64.30
IUUC-Nle-069485	Nomascus leucogenys	75.96	2.00e-125	441.00
IUUC-Opr-071206	Ochotona princeps	80.60	8.00e-26	110.00
IUUC-Oan-073361	Ornithorhynchus anatinus	55.56	3.00e-76	278.00
IUUC-Ocu-073923	Oryctolagus cuniculus	73.33	1.00e-113	403.00
IUUC-Oba-075743	Oryza barthii	43.06	1.00e-28	120.00
IUUC-Obr-076879	Oryza brachyantha	40.54	6.00e-28	118.00
IUUC-Ogl-077813	Oryza glaberrima	42.57	2.00e-29	122.00
IUUC-Ogu-078196	Oryza glumaepatula	43.06	1.00e-28	120.00
IUUC-Oin-080131	Oryza indica	42.57	1.00e-29	123.00
IUUC-Olo-080613	Oryza longistaminata	37.06	5.00e-26	111.00
IUUC-Ome-081912	Oryza meridionalis	43.06	1.00e-28	120.00
IUUC-Oni-082813	Oryza nivara	42.57	1.00e-29	123.00
IUUC-Opu-083663	Oryza punctata	42.57	2.00e-29	123.00
IUUC-Oru-085102	Oryza rufipogon	43.06	2.00e-28	119.00
IUUC-Osa-086204	Oryza sativa	42.57	1.00e-29	123.00
IUUC-Ola-086541	Oryzias latipes	51.90	3.00e-43	168.00
IUUC-Olu-087776	Ostreococcus lucimarinus	33.33	4.00e-13	67.00
IUUC-Oga-088039	Otolemur garnettii	70.61	2.00e-120	424.00
IUUC-Oar-089515	Ovis aries	72.48	1.00e-39	156.00
IUUC-Ptr-091291	Pan troglodytes	75.40	2.00e-126	444.00
IUUC-Pan-092644	Papio anubis	75.72	2.00e-126	445.00
IUUC-Psi-093646	Pelodiscus sinensis	52.48	6.00e-88	317.00
IUUC-Ppa-095698	Physcomitrella patens	35.29	9.00e-28	117.00
IUUC-Pfo-096601	Poecilia formosa	42.14	9.00e-62	229.00
IUUC-Pab-098407	Pongo abelii	76.68	4.00e-129	453.00
IUUC-Pop-099193	Populus trichocarpa	41.22	5.00e-29	121.00
IUUC-Pca-100366	Procavia capensis	73.57	9.00e-117	412.00
IUUC-Ppe-101608	Prunus persica	42.57	3.00e-29	122.00
IUUC-Pva-102775	Pteropus vampyrus	78.27	1.00e-130	458.00
IUUC-Rno-105626	Rattus norvegicus	67.90	1.00e-115	409.00
IUUC-Sha-106539	Sarcophilus harrisii	58.49	5.00e-93	333.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	32.72	7.00e-15	74.70
IUUC-Spo-108326	Schizosaccharomyces pombe	34.15	1.00e-15	77.00
IUUC-Smo-109434	Selaginella moellendorffii	44.67	3.00e-29	122.00
IUUC-Sit-109771	Setaria italica	39.86	4.00e-28	118.00
IUUC-Sly-111138	Solanum lycopersicum	41.22	7.00e-30	124.00
IUUC-Stu-112425	Solanum tuberosum	41.89	2.00e-30	126.00
IUUC-Sbi-114356	Sorghum bicolor	39.86	3.00e-27	115.00
IUUC-Tgu-116774	Taeniopygia guttata	50.72	2.00e-75	275.00
IUUC-Tru-117900	Takifugu rubripes	36.50	5.00e-47	181.00
IUUC-Tsy-119540	Tarsius syrichta	63.16	9.00e-43	166.00
IUUC-Tni-120252	Tetraodon nigroviridis	42.86	4.00e-64	238.00
IUUC-Tca-121717	Theobroma cacao	40.54	5.00e-29	121.00
IUUC-Tre-122069	Trichoderma reesei	29.93	9.00e-12	64.30
IUUC-Tae-124732	Triticum aestivum	42.57	1.00e-28	120.00
IUUC-Tme-127222	Tuber melanosporum	30.99	6.00e-10	58.20
IUUC-Ttr-129240	Tursiops truncatus	87.18	8.00e-70	256.00
IUUC-Vda-129913	Verticillium dahliae	25.60	9.00e-13	67.40
IUUC-Vvi-131718	Vitis vinifera	35.81	1.00e-26	113.00
IUUC-Xtr-132109	Xenopus tropicalis	50.47	1.00e-79	289.00
IUUC-Xma-133366	Xiphophorus maculatus	43.26	2.00e-62	232.00
IUUC-Zma-135563	Zea mays	39.66	4.00e-21	95.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence