iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043883

UUCD1 version

UUC-GlM-03458

Ensembl Protein ID

GLYMA18G16160.4

UniProt Accession

C6SVL7; C6SVL7_SOYBN

Genbank Protein ID

ACU13290.1; KRH56939.1; KRH63396.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

BT089210; CM000838; CM000837

Gene Name

LOC100803594; GLYMA_04G173300; GLYMA_05G028800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G16160	GLYMA18G16160.4	GLYMA18G16160.4
GLYMA18G16160	GLYMA18G16160.3	GLYMA18G16160.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.60e-53	181.1	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWsp 94
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++Wsp
   Q: 8    RLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSP 98
           9**********************9.9************************************************************9..***** PP
   S: 95   alsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
            ++v+ +l+siqsll++pnp+sp+n+eaa+++++n++ey+++vre
   Q: 99   IYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143
           ******************************************985 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTATAAA ATCAAAATAA TTGAAACCAA AGATTCTCTC TCTCTCTCTC ATGATCCCTA 60
CGCCATGGAA CCATTTCCCT CATAAAATTC TCTCTTCCTT TTTGGGTTCT CCTCAATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006281--P:DNA repair
GO:0016574--P:histone ubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

gmx:100499698; gmx:100802605; gmx:100803594

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002862	Amborella trichopoda	99.34	7.00e-88	315.00
IUUC-Aly-006336	Arabidopsis lyrata	97.37	2.00e-78	284.00
IUUC-Ath-007547	Arabidopsis thaliana	97.37	2.00e-78	284.00
IUUC-Ame-010844	Astyanax mexicanus	79.19	4.00e-72	263.00
IUUC-Bol-015726	Brassica oleracea	96.05	2.00e-86	313.00
IUUC-Bra-016803	Brassica rapa	97.37	2.00e-78	284.00
IUUC-Cel-018244	Caenorhabditis elegans	73.83	4.00e-69	253.00
IUUC-Cja-018783	Callithrix jacchus	79.19	6.00e-72	262.00
IUUC-Cfa-020646	Canis familiaris	79.19	1.00e-71	262.00
IUUC-Cpo-021323	Cavia porcellus	78.52	9.00e-72	261.00
IUUC-Cre-022822	Chlamydomonas reinhardtii	77.63	1.00e-61	228.00
IUUC-Csa-023588	Chlorocebus sabaeus	79.19	6.00e-72	262.00
IUUC-Cne-026864	Cryptococcus neoformans	69.80	5.00e-62	229.00
IUUC-Cme-027284	Cyanidioschyzon merolae	68.67	2.00e-57	215.00
IUUC-Dre-028774	Danio rerio	79.19	4.00e-72	263.00
IUUC-Dme-031863	Drosophila melanogaster	77.85	6.00e-71	259.00
IUUC-Ete-032595	Echinops telfairi	75.84	2.00e-69	254.00
IUUC-Eca-033562	Equus caballus	78.81	1.00e-70	258.00
IUUC-Fca-036581	Felis catus	79.19	6.00e-72	262.00
IUUC-Gmo-038517	Gadus morhua	79.19	6.00e-72	262.00
IUUC-Gga-040588	Gallus gallus	79.19	6.00e-72	262.00
IUUC-Gac-041504	Gasterosteus aculeatus	78.52	2.00e-71	260.00
IUUC-Ggo-044896	Gorilla gorilla	79.19	6.00e-72	262.00
IUUC-Hsa-046383	Homo sapiens	79.19	6.00e-72	262.00
IUUC-Itr-048507	Ictidomys tridecemlineatus	79.19	6.00e-72	262.00
IUUC-Lch-050415	Latimeria chalumnae	79.19	2.00e-72	264.00
IUUC-Loc-051731	Lepisosteus oculatus	79.19	6.00e-72	262.00
IUUC-Laf-053680	Loxodonta africana	79.19	6.00e-72	262.00
IUUC-Mcc-055546	Macaca mulatta	79.19	2.00e-71	261.00
IUUC-Meu-056231	Macropus eugenii	79.19	6.00e-72	262.00
IUUC-Mtr-058305	Medicago truncatula	100.00	8.00e-89	318.00
IUUC-Mvi-060330	Microbotryum violaceum	71.05	1.00e-55	208.00
IUUC-Mdo-062292	Monodelphis domestica	79.19	6.00e-72	262.00
IUUC-Mmu-063680	Mus musculus	79.19	6.00e-72	262.00
IUUC-Nle-069121	Nomascus leucogenys	79.19	6.00e-72	262.00
IUUC-Ocu-074550	Oryctolagus cuniculus	79.19	1.00e-71	262.00
IUUC-Ola-086407	Oryzias latipes	79.19	6.00e-72	262.00
IUUC-Olu-087830	Ostreococcus lucimarinus	77.85	1.00e-62	231.00
IUUC-Oga-088659	Otolemur garnettii	79.19	6.00e-72	262.00
IUUC-Ptr-091305	Pan troglodytes	79.19	6.00e-72	262.00
IUUC-Pan-092740	Papio anubis	79.19	2.00e-71	261.00
IUUC-Psi-094094	Pelodiscus sinensis	79.19	6.00e-72	262.00
IUUC-Pfo-096656	Poecilia formosa	78.52	9.00e-72	261.00
IUUC-Pab-097972	Pongo abelii	79.19	6.00e-72	262.00
IUUC-Pop-099517	Populus trichocarpa	100.00	2.00e-88	317.00
IUUC-Pca-100906	Procavia capensis	75.84	1.00e-66	245.00
IUUC-Ppe-101949	Prunus persica	100.00	4.00e-88	317.00
IUUC-Pva-102380	Pteropus vampyrus	79.19	1.00e-70	258.00
IUUC-Sly-111506	Solanum lycopersicum	99.34	4.00e-88	316.00
IUUC-Stu-112080	Solanum tuberosum	99.34	4.00e-88	316.00
IUUC-Ssc-116265	Sus scrofa	79.19	6.00e-72	262.00
IUUC-Tgu-117383	Taeniopygia guttata	79.19	6.00e-72	262.00
IUUC-Tca-121827	Theobroma cacao	99.34	3.00e-88	316.00
IUUC-Ttr-129050	Tursiops truncatus	78.52	5.00e-70	256.00
IUUC-Vvi-131547	Vitis vinifera	100.00	6.00e-89	319.00
IUUC-Xtr-132301	Xenopus tropicalis	79.19	6.00e-72	262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence