iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aor-010015

Ensembl Protein ID

BAE56515

UniProt Accession

Q2UPK0; ERB1_ASPOR

Genbank Protein ID

BAE56515.1

Protein Name

Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

AP007151

Gene Name

erb1; AO090005001611

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AO090005001611	BAE56515	BAE56515

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-12	45.9	421	458

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v+ la  ++   l++G+dDgt +vW+l tg++l
   Q: 421  GHKGRVRTLAVdPSgLWLATGGDDGTARVWELLTGRQL 458
           8**********9665789*****************987 PP

Organism

Aspergillus oryzae

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MDASKSSKKR KAVTRDVEEE AGVFSGDELQ VDVLDGALSD NANDLSSDED VSDSEIELVD 60
DFSDEEDGDE EEELDSDEIP SDGGESFKKA SGTGNARDES SSDEEQLNYR IEKDANGNDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCCT CTAAGTCTTC AAAGAAACGC AAGGCGGTTA CTCGAGATGT TGAGGAGGAG 60
GCTGGTGTGT TTTCTGGGGA TGAATTGCAG GTTGATGTCC TAGACGGCGC ACTTTCAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	37.84	1.00e-104	372.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.96	5.00e-132	462.00
IUUC-Atr-003141	Amborella trichopoda	36.63	7.00e-74	269.00
IUUC-Apl-003545	Anas platyrhynchos	40.40	1.00e-118	417.00
IUUC-Aly-005649	Arabidopsis lyrata	40.43	5.00e-135	473.00
IUUC-Ath-007625	Arabidopsis thaliana	40.59	5.00e-128	449.00
IUUC-Ago-007958	Ashbya gossypii	55.81	0.00e+00	763.00
IUUC-Acl-008344	Aspergillus clavatus	86.71	0.00e+00	1265.00
IUUC-Afl-008616	Aspergillus flavus	100.00	0.00e+00	1459.00
IUUC-Afu-009083	Aspergillus fumigatus	88.18	0.00e+00	1273.00
IUUC-Ani-009365	Aspergillus nidulans	83.73	0.00e+00	1270.00
IUUC-Ang-009796	Aspergillus niger	87.23	0.00e+00	1274.00
IUUC-Ate-010537	Aspergillus terreus	87.93	0.00e+00	1353.00
IUUC-Ame-011767	Astyanax mexicanus	47.41	2.00e-61	226.00
IUUC-Bgr-012286	Blumeria graminis	60.07	0.00e+00	944.00
IUUC-Bta-013569	Bos taurus	42.64	7.00e-146	509.00
IUUC-Bci-013820	Botrytis cinerea	64.22	0.00e+00	904.00
IUUC-Bdi-014477	Brachypodium distachyon	40.56	2.00e-129	454.00
IUUC-Bol-016099	Brassica oleracea	40.90	9.00e-134	468.00
IUUC-Bra-017174	Brassica rapa	40.74	3.00e-133	468.00
IUUC-Cel-018201	Caenorhabditis elegans	37.78	2.00e-113	400.00
IUUC-Cja-019009	Callithrix jacchus	38.54	3.00e-127	447.00
IUUC-Cfa-020173	Canis familiaris	39.02	4.00e-130	456.00
IUUC-Cpo-021796	Cavia porcellus	42.64	3.00e-144	503.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.29	3.00e-127	446.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.79	3.00e-151	526.00
IUUC-Cin-025782	Ciona intestinalis	41.10	2.00e-151	528.00
IUUC-Csv-026352	Ciona savignyi	40.57	2.00e-145	507.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	59.15	0.00e+00	739.00
IUUC-Cne-027004	Cryptococcus neoformans	47.85	0.00e+00	628.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.23	6.00e-111	392.00
IUUC-Dre-028658	Danio rerio	44.51	6.00e-156	542.00
IUUC-Dno-028883	Dasypus novemcinctus	42.33	3.00e-144	503.00
IUUC-Dor-031031	Dipodomys ordii	41.90	3.00e-147	513.00
IUUC-Dse-031443	Dothistroma septosporum	59.63	0.00e+00	832.00
IUUC-Dme-031786	Drosophila melanogaster	42.51	6.00e-152	529.00
IUUC-Eca-033677	Equus caballus	42.17	1.00e-143	501.00
IUUC-Eeu-035310	Erinaceus europaeus	39.46	1.00e-108	385.00
IUUC-Fca-035888	Felis catus	41.36	2.00e-142	497.00
IUUC-Fal-037438	Ficedula albicollis	43.95	5.00e-118	416.00
IUUC-Fox-037973	Fusarium oxysporum	64.22	0.00e+00	892.00
IUUC-Fso-038187	Fusarium solani	64.52	0.00e+00	899.00
IUUC-Gmo-039114	Gadus morhua	40.62	1.00e-136	478.00
IUUC-Ggr-039746	Gaeumannomyces graminis	59.34	0.00e+00	906.00
IUUC-Gga-040631	Gallus gallus	41.10	5.00e-77	279.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.11	2.00e-144	504.00
IUUC-Gma-044215	Glycine max	41.20	7.00e-136	476.00
IUUC-Ggo-045587	Gorilla gorilla	42.95	2.00e-151	527.00
IUUC-Hsa-046319	Homo sapiens	42.95	3.00e-151	527.00
IUUC-Hvu-047526	Hordeum vulgare	39.81	2.00e-122	431.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.81	2.00e-145	508.00
IUUC-Kpa-049221	Komagataella pastoris	51.31	0.00e+00	691.00
IUUC-Lch-049640	Latimeria chalumnae	42.51	2.00e-155	540.00
IUUC-Lpe-051135	Leersia perrieri	41.79	2.00e-69	254.00
IUUC-Loc-051930	Lepisosteus oculatus	43.43	1.00e-153	534.00
IUUC-Lma-053290	Leptosphaeria maculans	65.84	0.00e+00	895.00
IUUC-Laf-053903	Loxodonta africana	39.94	4.00e-125	440.00
IUUC-Mcc-055471	Macaca mulatta	42.48	4.00e-151	526.00
IUUC-Meu-056190	Macropus eugenii	42.04	7.00e-145	505.00
IUUC-Mor-057135	Magnaporthe oryzae	64.67	0.00e+00	875.00
IUUC-Mpo-057475	Magnaporthe poae	58.07	0.00e+00	848.00
IUUC-Mtr-058689	Medicago truncatula	39.36	7.00e-122	429.00
IUUC-Mla-059149	Melampsora laricipopulina	49.26	0.00e+00	625.00
IUUC-Mga-059645	Meleagris gallopavo	33.21	6.00e-39	152.00
IUUC-Mvi-060485	Microbotryum violaceum	44.37	1.00e-150	526.00
IUUC-Mmr-061674	Microcebus murinus	43.38	2.00e-144	504.00
IUUC-Mdo-062973	Monodelphis domestica	42.33	3.00e-151	527.00
IUUC-Mmu-064180	Mus musculus	43.12	4.00e-148	516.00
IUUC-Mac-064535	Musa acuminata	39.10	1.00e-84	306.00
IUUC-Mpu-066406	Mustela putorius furo	42.04	1.00e-146	511.00
IUUC-Mlu-067795	Myotis lucifugus	42.33	6.00e-136	476.00
IUUC-Nfi-068516	Neosartorya fischeri	88.73	0.00e+00	1231.00
IUUC-Ncr-068767	Neurospora crassa	65.64	0.00e+00	828.00
IUUC-Opr-071084	Ochotona princeps	46.89	7.00e-59	219.00
IUUC-Ont-071614	Oreochromis niloticus	43.01	5.00e-152	529.00
IUUC-Oba-075980	Oryza barthii	41.67	3.00e-69	254.00
IUUC-Obr-076799	Oryza brachyantha	40.62	2.00e-126	444.00
IUUC-Ogl-077134	Oryza glaberrima	40.31	4.00e-120	423.00
IUUC-Ogu-078655	Oryza glumaepatula	38.62	9.00e-116	409.00
IUUC-Oin-079654	Oryza indica	40.31	6.00e-120	422.00
IUUC-Olo-080706	Oryza longistaminata	42.07	8.00e-70	256.00
IUUC-Ome-081716	Oryza meridionalis	41.79	3.00e-69	254.00
IUUC-Oni-082508	Oryza nivara	38.40	6.00e-113	399.00
IUUC-Opu-083707	Oryza punctata	42.07	1.00e-69	255.00
IUUC-Oru-084453	Oryza rufipogon	42.07	8.00e-70	256.00
IUUC-Osa-085811	Oryza sativa	40.15	1.00e-119	421.00
IUUC-Ola-087361	Oryzias latipes	43.80	7.00e-153	532.00
IUUC-Oga-088015	Otolemur garnettii	43.26	2.00e-151	527.00
IUUC-Oar-090058	Ovis aries	51.72	8.00e-49	186.00
IUUC-Ptr-090631	Pan troglodytes	44.71	3.00e-63	233.00
IUUC-Pan-092306	Papio anubis	42.79	6.00e-152	529.00
IUUC-Pma-094622	Petromyzon marinus	42.90	2.00e-155	540.00
IUUC-Pno-094794	Phaeosphaeria nodorum	60.86	0.00e+00	837.00
IUUC-Ppa-095528	Physcomitrella patens	38.66	9.00e-87	312.00
IUUC-Pfo-096682	Poecilia formosa	42.60	6.00e-155	539.00
IUUC-Pab-097939	Pongo abelii	42.74	8.00e-136	475.00
IUUC-Pop-099530	Populus trichocarpa	42.71	1.00e-121	428.00
IUUC-Pca-100333	Procavia capensis	42.17	3.00e-145	507.00
IUUC-Ppe-102078	Prunus persica	40.50	2.00e-130	457.00
IUUC-Pgr-103525	Puccinia graminis	49.40	8.00e-167	578.00
IUUC-Ptt-103929	Puccinia triticina	49.24	1.00e-160	558.00
IUUC-Pte-104029	Pyrenophora teres	66.47	0.00e+00	942.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	65.75	0.00e+00	946.00
IUUC-Rno-105248	Rattus norvegicus	42.95	3.00e-147	513.00
IUUC-Sce-106381	Saccharomyces cerevisiae	54.68	0.00e+00	749.00
IUUC-Sha-106519	Sarcophilus harrisii	42.55	3.00e-150	523.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	48.31	2.00e-170	590.00
IUUC-Spo-108071	Schizosaccharomyces pombe	46.74	4.00e-161	559.00
IUUC-Smo-109604	Selaginella moellendorffii	39.73	4.00e-118	417.00
IUUC-Sit-109742	Setaria italica	39.66	2.00e-127	447.00
IUUC-Sly-110970	Solanum lycopersicum	43.23	6.00e-75	273.00
IUUC-Stu-112593	Solanum tuberosum	40.34	8.00e-132	462.00
IUUC-Sar-113123	Sorex araneus	38.60	2.00e-56	210.00
IUUC-Sbi-113945	Sorghum bicolor	40.03	8.00e-125	439.00
IUUC-Sre-115188	Sporisorium reilianum	46.30	7.00e-168	582.00
IUUC-Ssc-115352	Sus scrofa	42.02	2.00e-147	514.00
IUUC-Tru-117685	Takifugu rubripes	44.10	4.00e-158	550.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.32	5.00e-150	523.00
IUUC-Tca-121664	Theobroma cacao	41.27	2.00e-134	471.00
IUUC-Tre-122229	Trichoderma reesei	64.23	0.00e+00	800.00
IUUC-Tvi-122576	Trichoderma virens	64.13	0.00e+00	804.00
IUUC-Tae-124110	Triticum aestivum	40.03	5.00e-116	409.00
IUUC-Tur-126781	Triticum urartu	37.36	8.00e-100	356.00
IUUC-Tme-127080	Tuber melanosporum	65.06	0.00e+00	888.00
IUUC-Ttr-128514	Tursiops truncatus	40.04	4.00e-92	330.00
IUUC-Uma-129556	Ustilago maydis	45.99	1.00e-162	565.00
IUUC-Vda-129715	Verticillium dahliae	65.21	0.00e+00	890.00
IUUC-Vvi-131211	Vitis vinifera	40.54	8.00e-126	442.00
IUUC-Xma-133883	Xiphophorus maculatus	42.60	4.00e-150	523.00
IUUC-Yli-134438	Yarrowia lipolytica	53.37	0.00e+00	696.00
IUUC-Zma-135341	Zea mays	37.02	8.00e-119	419.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence