• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006984
Ensembl Protein ID AT2G47110.2
UniProt Accession P59232; O80715; P19233; P59263; Q38875; Q9LDJ2; Q9LYW1; Q9M0W3; Q9M1P9; Q9S7X3; R27AB_ARATH
Genbank Protein ID AAA32907.1; AAC34235.1; AEC10801.1; AEC10802.1; AAK53000.1; AAM98297.1; AAN28749.1; AAM65909.1
Protein Name Ubiquitin-40S ribosomal protein S27a-2; Ubiquitin; 40S ribosomal protein S27a-2
Genbank Nucleotide ID J05540; AC004411; CP002685; CP002685; AF375416; AY142033; AY143810; AY088370
Gene Name RPS27AB; UBQ6; At2g47110; F14M4.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G47110 AT2G47110.2 AT2G47110.2
Annotation
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAHINTMentha
Post-translational Modifications (PTMs)
dbPPTdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 2.60e-41 140.7 1 76
ULD/UDP/UBQ/UBQ_PIM 5.60e-28 97.6 1 73
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8
   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Ribosomal protein RSP27a-2 is part of the 40S ribosomal subunit.
 Ribosomal protein RSP27a-2 is part of the 40S ribosomal subunit.
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL AVLQFYKVDG SGKVQRLRKE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006984|ULD,NEDD8;ULD,UBQ_PIM|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTATTTCTT CTCACCACTT AAAGAGTTTC CCCAGAAATT TTCTTCCGCC GTAAAAGCAA 60
AAAAAGATGC AGATCTTCGT GAAAACCCTA ACGGGGAAGA CGATCACTCT CGAGGTCGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006984|ULD,NEDD8;ULD,UBQ_PIM|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin
PRINTS

PR00348--UBIQUITIN
SMART

SM01402--Ribosomal_S27
SM00213--UBQ
Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005794--C:Golgi apparatus
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG ath:AT2G47110
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001873 Ailuropoda melanoleuca 85.53 8.00e-57 211.00
IUUC-Atr-003002 Amborella trichopoda 92.31 6.00e-69 251.00
IUUC-Aca-005055 Anolis carolinensis 84.87 2.00e-62 230.00
IUUC-Aly-005675 Arabidopsis lyrata 100.00 9.00e-75 271.00
IUUC-Ago-007733 Ashbya gossypii 83.22 3.00e-51 192.00
IUUC-Acl-008099 Aspergillus clavatus 84.00 3.00e-54 203.00
IUUC-Afl-008474 Aspergillus flavus 84.00 5.00e-54 202.00
IUUC-Afu-009021 Aspergillus fumigatus 84.67 1.00e-60 224.00
IUUC-Ani-009265 Aspergillus nidulans 84.00 9.00e-54 201.00
IUUC-Ang-009629 Aspergillus niger 84.67 3.00e-54 202.00
IUUC-Aor-009936 Aspergillus oryzae 84.00 5.00e-54 202.00
IUUC-Ate-010436 Aspergillus terreus 84.00 3.00e-54 202.00
IUUC-Ame-011421 Astyanax mexicanus 85.53 2.00e-56 210.00
IUUC-Bgr-011984 Blumeria graminis 84.67 1.00e-60 224.00
IUUC-Bta-012585 Bos taurus 85.53 8.00e-57 211.00
IUUC-Bci-013920 Botrytis cinerea 84.00 2.00e-54 203.00
IUUC-Bdi-014638 Brachypodium distachyon 93.55 4.00e-61 226.00
IUUC-Cja-019661 Callithrix jacchus 84.87 4.00e-52 196.00
IUUC-Cfa-020795 Canis familiaris 85.53 8.00e-57 211.00
IUUC-Cpo-021905 Cavia porcellus 84.42 3.00e-55 206.00
IUUC-Csa-023120 Chlorocebus sabaeus 85.53 8.00e-57 211.00
IUUC-Cin-025785 Ciona intestinalis 84.42 4.00e-57 212.00
IUUC-Csv-026028 Ciona savignyi 77.92 6.00e-53 198.00
IUUC-Cgl-026423 Colletotrichum gloeosporioides 76.47 7.00e-50 188.00
IUUC-Dre-028206 Danio rerio 85.53 2.00e-56 210.00
IUUC-Dno-029073 Dasypus novemcinctus 85.53 1.00e-56 211.00
IUUC-Dse-031483 Dothistroma septosporum 84.11 4.00e-59 219.00
IUUC-Dme-032068 Drosophila melanogaster 84.21 2.00e-51 193.00
IUUC-Ete-032297 Echinops telfairi 59.21 1.00e-46 177.00
IUUC-Eca-034346 Equus caballus 85.53 6.00e-57 212.00
IUUC-Fca-035555 Felis catus 85.53 8.00e-57 211.00
IUUC-Fal-037049 Ficedula albicollis 85.53 6.00e-57 212.00
IUUC-Fox-037994 Fusarium oxysporum 83.12 8.00e-60 221.00
IUUC-Fso-038121 Fusarium solani 83.66 4.00e-61 225.00
IUUC-Gmo-039231 Gadus morhua 85.53 2.00e-56 210.00
IUUC-Ggr-039996 Gaeumannomyces graminis 84.31 8.00e-56 208.00
IUUC-Gga-040938 Gallus gallus 85.53 6.00e-57 212.00
IUUC-Gac-041956 Gasterosteus aculeatus 85.53 2.00e-56 210.00
IUUC-Gma-043007 Glycine max 96.13 6.00e-70 255.00
IUUC-Ggo-044980 Gorilla gorilla 85.53 8.00e-57 211.00
IUUC-Hsa-046329 Homo sapiens 85.53 8.00e-57 211.00
IUUC-Itr-047994 Ictidomys tridecemlineatus 85.53 8.00e-57 211.00
IUUC-Kpa-049159 Komagataella pastoris 83.67 3.00e-55 206.00
IUUC-Lch-050032 Latimeria chalumnae 85.53 5.00e-57 212.00
IUUC-Loc-052020 Lepisosteus oculatus 85.53 3.00e-56 209.00
IUUC-Lma-053163 Leptosphaeria maculans 84.00 4.00e-60 222.00
IUUC-Laf-054502 Loxodonta africana 81.43 4.00e-46 176.00
IUUC-Mcc-055895 Macaca mulatta 85.53 8.00e-57 211.00
IUUC-Meu-056529 Macropus eugenii 85.53 8.00e-57 211.00
IUUC-Mor-056959 Magnaporthe oryzae 84.31 8.00e-56 208.00
IUUC-Mpo-057436 Magnaporthe poae 84.31 8.00e-56 208.00
IUUC-Mtr-058225 Medicago truncatula 96.13 2.00e-70 256.00
IUUC-Mla-058871 Melampsora laricipopulina 86.00 4.00e-62 229.00
IUUC-Mga-059211 Meleagris gallopavo 80.28 3.00e-48 182.00
IUUC-Mmr-060694 Microcebus murinus 85.53 8.00e-57 211.00
IUUC-Mdo-062150 Monodelphis domestica 84.42 1.00e-55 208.00
IUUC-Mmu-064336 Mus musculus 84.87 4.00e-56 209.00
IUUC-Mac-064616 Musa acuminata 95.42 7.00e-68 248.00
IUUC-Mpu-066613 Mustela putorius furo 85.53 8.00e-57 211.00
IUUC-Mlu-067676 Myotis lucifugus 85.53 8.00e-57 211.00
IUUC-Nfi-068350 Neosartorya fischeri 84.67 1.00e-60 224.00
IUUC-Ncr-068635 Neurospora crassa 84.21 2.00e-55 207.00
IUUC-Nle-069607 Nomascus leucogenys 82.24 6.00e-54 202.00
IUUC-Opr-070523 Ochotona princeps 84.11 1.00e-53 201.00
IUUC-Ont-071636 Oreochromis niloticus 85.53 2.00e-56 210.00
IUUC-Oan-073638 Ornithorhynchus anatinus 85.53 6.00e-57 212.00
IUUC-Ocu-074497 Oryctolagus cuniculus 85.53 8.00e-57 211.00
IUUC-Oba-075488 Oryza barthii 92.90 4.00e-61 226.00
IUUC-Obr-076443 Oryza brachyantha 92.90 4.00e-61 226.00
IUUC-Ogl-077000 Oryza glaberrima 92.90 4.00e-61 226.00
IUUC-Oin-080161 Oryza indica 92.90 4.00e-61 226.00
IUUC-Olo-080936 Oryza longistaminata 82.14 5.00e-24 101.00
IUUC-Ome-081322 Oryza meridionalis 92.90 4.00e-61 226.00
IUUC-Oru-085032 Oryza rufipogon 92.90 4.00e-61 226.00
IUUC-Osa-085398 Oryza sativa 92.90 4.00e-61 226.00
IUUC-Ola-086383 Oryzias latipes 85.53 1.00e-56 211.00
IUUC-Olu-087619 Ostreococcus lucimarinus 85.81 2.00e-47 180.00
IUUC-Oga-089160 Otolemur garnettii 73.03 7.00e-54 201.00
IUUC-Oar-090107 Ovis aries 85.53 1.00e-56 211.00
IUUC-Ptr-090854 Pan troglodytes 85.53 9.00e-57 211.00
IUUC-Pan-092065 Papio anubis 85.53 8.00e-57 211.00
IUUC-Psi-093901 Pelodiscus sinensis 83.82 8.00e-48 181.00
IUUC-Ppa-095330 Physcomitrella patens 94.23 5.00e-70 255.00
IUUC-Pfo-097442 Poecilia formosa 85.53 2.00e-56 210.00
IUUC-Pab-098246 Pongo abelii 74.34 7.00e-54 201.00
IUUC-Pop-099335 Populus trichocarpa 96.13 2.00e-70 256.00
IUUC-Ppe-101784 Prunus persica 96.13 2.00e-70 256.00
IUUC-Pva-102665 Pteropus vampyrus 87.07 4.00e-55 206.00
IUUC-Pgr-103596 Puccinia graminis 85.33 7.00e-58 215.00
IUUC-Ptt-103852 Puccinia triticina 67.09 1.00e-47 182.00
IUUC-Pte-104221 Pyrenophora teres 84.67 2.00e-60 223.00
IUUC-Pyt-104464 Pyrenophora triticirepentis 83.33 3.00e-59 219.00
IUUC-Rno-105805 Rattus norvegicus 84.87 4.00e-56 209.00
IUUC-Sce-106232 Saccharomyces cerevisiae 85.14 4.00e-52 196.00
IUUC-Sha-106772 Sarcophilus harrisii 85.53 9.00e-57 211.00
IUUC-Sja-107726 Schizosaccharomyces japonicus 86.39 5.00e-57 212.00
IUUC-Spo-108212 Schizosaccharomyces pombe 85.71 4.00e-50 189.00
IUUC-Ssl-108492 Sclerotinia sclerotiorum 84.00 2.00e-54 203.00
IUUC-Sit-110462 Setaria italica 93.55 4.00e-67 246.00
IUUC-Sly-111035 Solanum lycopersicum 96.75 1.00e-70 258.00
IUUC-Stu-112470 Solanum tuberosum 96.13 2.00e-70 256.00
IUUC-Sbi-113920 Sorghum bicolor 92.90 1.00e-66 244.00
IUUC-Ssc-115514 Sus scrofa 85.53 8.00e-57 211.00
IUUC-Tgu-116890 Taeniopygia guttata 84.97 1.00e-55 207.00
IUUC-Tru-118475 Takifugu rubripes 85.53 2.00e-56 210.00
IUUC-Tsy-119447 Tarsius syrichta 85.53 7.00e-57 211.00
IUUC-Tni-119751 Tetraodon nigroviridis 82.35 3.00e-46 176.00
IUUC-Tca-121126 Theobroma cacao 96.13 2.00e-70 256.00
IUUC-Tre-122027 Trichoderma reesei 82.35 6.00e-60 221.00
IUUC-Tvi-122659 Trichoderma virens 82.35 6.00e-60 221.00
IUUC-Tae-125626 Triticum aestivum 92.90 5.00e-61 225.00
IUUC-Tme-126994 Tuber melanosporum 84.00 2.00e-53 200.00
IUUC-Ttr-128453 Tursiops truncatus 85.53 8.00e-57 211.00
IUUC-Vda-129762 Verticillium dahliae 81.70 2.00e-53 200.00
IUUC-Vpa-130119 Vicugna pacos 67.11 2.00e-35 140.00
IUUC-Xtr-131977 Xenopus tropicalis 76.97 1.00e-48 184.00
IUUC-Xma-133747 Xiphophorus maculatus 83.05 6.00e-38 148.00
IUUC-Yli-134406 Yarrowia lipolytica 83.67 1.00e-44 171.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved