iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-104981

Ensembl Protein ID

ENSRNOP00000059323.3

UniProt Accession

F1M3W5; F1M3W5_RAT

Genbank Protein ID

ENSRNOP00000059323

Protein Name

Dmx-like 2

Genbank Nucleotide ID

AABR07073408

Gene Name

Dmxl2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000009170.8	ENSRNOT00000066197.4	ENSRNOP00000059323.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-14	51.9	2961	2998

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H + + +la+ s+  ++ +Gs  g+ikvW+l+ + l++
   Q: 2961 HDSAIKALALdSCeEYFTTGSAEGNIKVWRLTGHGLIH 2998
           9999******9778****************98776665 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MHLHQVLTGA VNPGDNCYSV GSVGEVPFTA YGSGCDIVIL ASDFECVQII PGAKHGNIQV 60
SCVECSNQHG RVAASYGNAV CIFEPLGINS HKRNSQLKCQ WLKTGQFFLS SVTFNLAWDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGCGCTGA GTCCCAAGAA CGCACAGGAA GCGGCTGCGG CCGGGCGCCG GCGCCGGGCT 60
GGTCCTTCTC TGGTGCAGAG CTCGGACCAG CCGGAATCCC GAGATGCATC TGCATCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005615--C:extracellular space
GO:0043291--C:RAVE complex
GO:0008021--C:synaptic vesicle
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

KEGG

rno:315676

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001296	Ailuropoda melanoleuca	91.90	0.00e+00	5583.00
IUUC-Apl-003695	Anas platyrhynchos	81.09	0.00e+00	4879.00
IUUC-Aca-004516	Anolis carolinensis	80.15	0.00e+00	4778.00
IUUC-Afu-009077	Aspergillus fumigatus	29.87	6.00e-37	150.00
IUUC-Ani-009437	Aspergillus nidulans	29.33	7.00e-42	166.00
IUUC-Cel-018537	Caenorhabditis elegans	30.21	0.00e+00	1349.00
IUUC-Cja-018770	Callithrix jacchus	91.83	0.00e+00	5602.00
IUUC-Cfa-021089	Canis familiaris	92.52	0.00e+00	5589.00
IUUC-Cpo-022459	Cavia porcellus	88.56	0.00e+00	4949.00
IUUC-Csa-023972	Chlorocebus sabaeus	92.55	0.00e+00	5644.00
IUUC-Cho-024762	Choloepus hoffmanni	87.91	0.00e+00	2259.00
IUUC-Dre-028673	Danio rerio	70.01	0.00e+00	4170.00
IUUC-Dno-029855	Dasypus novemcinctus	89.06	0.00e+00	5361.00
IUUC-Dor-030221	Dipodomys ordii	89.69	0.00e+00	1990.00
IUUC-Dme-031825	Drosophila melanogaster	39.73	0.00e+00	1156.00
IUUC-Ete-033176	Echinops telfairi	84.65	0.00e+00	2763.00
IUUC-Eca-033386	Equus caballus	91.90	0.00e+00	5573.00
IUUC-Fca-036411	Felis catus	86.87	0.00e+00	3192.00
IUUC-Fal-036643	Ficedula albicollis	81.53	0.00e+00	4734.00
IUUC-Gmo-038514	Gadus morhua	67.70	0.00e+00	2177.00
IUUC-Gga-040765	Gallus gallus	81.99	0.00e+00	4918.00
IUUC-Gac-042017	Gasterosteus aculeatus	67.26	0.00e+00	3950.00
IUUC-Ggo-045379	Gorilla gorilla	90.76	0.00e+00	4633.00
IUUC-Hsa-046758	Homo sapiens	92.09	0.00e+00	5636.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	92.42	0.00e+00	5553.00
IUUC-Lch-049469	Latimeria chalumnae	73.53	0.00e+00	4283.00
IUUC-Loc-052786	Lepisosteus oculatus	72.96	0.00e+00	4342.00
IUUC-Laf-054102	Loxodonta africana	90.17	0.00e+00	5496.00
IUUC-Mcc-055533	Macaca mulatta	92.13	0.00e+00	5603.00
IUUC-Meu-056132	Macropus eugenii	81.18	0.00e+00	1260.00
IUUC-Mga-059386	Meleagris gallopavo	81.56	0.00e+00	4845.00
IUUC-Mmr-061082	Microcebus murinus	91.64	0.00e+00	5552.00
IUUC-Mdo-062837	Monodelphis domestica	84.75	0.00e+00	5043.00
IUUC-Mmu-063696	Mus musculus	97.19	0.00e+00	5777.00
IUUC-Mpu-066054	Mustela putorius furo	91.86	0.00e+00	5580.00
IUUC-Mlu-068235	Myotis lucifugus	88.62	0.00e+00	5327.00
IUUC-Nfi-068420	Neosartorya fischeri	29.77	2.00e-37	152.00
IUUC-Nle-069401	Nomascus leucogenys	92.62	0.00e+00	5631.00
IUUC-Opr-070543	Ochotona princeps	90.06	0.00e+00	2313.00
IUUC-Ont-071790	Oreochromis niloticus	68.68	0.00e+00	4067.00
IUUC-Oan-072796	Ornithorhynchus anatinus	81.68	1.00e-94	338.00
IUUC-Ocu-074711	Oryctolagus cuniculus	92.16	0.00e+00	5505.00
IUUC-Ola-087560	Oryzias latipes	68.35	0.00e+00	4085.00
IUUC-Oga-088868	Otolemur garnettii	90.90	0.00e+00	5417.00
IUUC-Oar-090063	Ovis aries	91.67	0.00e+00	5581.00
IUUC-Ptr-091058	Pan troglodytes	92.00	0.00e+00	5600.00
IUUC-Ppa-095505	Physcomitrella patens	26.84	3.00e-42	168.00
IUUC-Pfo-097521	Poecilia formosa	66.95	0.00e+00	3948.00
IUUC-Pab-098507	Pongo abelii	92.61	0.00e+00	5160.00
IUUC-Pca-100419	Procavia capensis	84.30	0.00e+00	1598.00
IUUC-Pva-102432	Pteropus vampyrus	89.47	0.00e+00	4927.00
IUUC-Sha-106955	Sarcophilus harrisii	82.29	0.00e+00	4857.00
IUUC-Smo-109573	Selaginella moellendorffii	22.87	7.00e-14	72.00
IUUC-Sar-112928	Sorex araneus	84.06	0.00e+00	1913.00
IUUC-Tgu-117271	Taeniopygia guttata	82.06	0.00e+00	4907.00
IUUC-Tru-118349	Takifugu rubripes	68.24	0.00e+00	4108.00
IUUC-Tni-119924	Tetraodon nigroviridis	67.11	0.00e+00	4001.00
IUUC-Tbe-127760	Tupaia belangeri	88.37	0.00e+00	3580.00
IUUC-Ttr-128323	Tursiops truncatus	83.15	0.00e+00	4855.00
IUUC-Vpa-130118	Vicugna pacos	90.22	0.00e+00	1887.00
IUUC-Xtr-132638	Xenopus tropicalis	74.90	0.00e+00	4360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence