iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017625

Ensembl Protein ID

Bra003720.1-P

UniProt Accession

M4CHN7; M4CHN7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003720	Bra003720.1	Bra003720.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-09	37.8	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl++f   d+++vlp CgH fh +C+  w         + +CP Cr
   Q: 104  CVICLTEFaaGDELRVLPqCGHGFHVSCIDTW------LESHSSCPSCR 146
           ********88555*******************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MARLLFRLLQ ESTSPSPAVV SPTLNSNLIV IIAALLCALI CVLGLVAVSR CTWLRRIAAP 60
NSVQTHHQPP VAAANRGLKK KILRSLPKLT YSPDSPPAEK LVECVICLTE FAAGDELRVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGAC TTCTCTTTCG TCTTCTTCAA GAATCCACCT CTCCGTCTCC GGCTGTAGTT 60
TCTCCGACAT TAAACTCTAA TCTCATAGTC ATCATAGCTG CTCTTCTCTG CGCACTCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	46.67	1.00e-20	92.00
IUUC-Ath-006886	Arabidopsis thaliana	79.89	9.00e-69	252.00
IUUC-Bol-015898	Brassica oleracea	97.84	4.00e-82	296.00
IUUC-Ola-086520	Oryzias latipes	47.22	4.00e-14	69.70
IUUC-Pop-098856	Populus trichocarpa	68.49	3.00e-43	167.00
IUUC-Xtr-132536	Xenopus tropicalis	52.24	2.00e-14	71.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence