iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099621

Ensembl Protein ID

POPTR_0004s15790.1

UniProt Accession

B9H0M4; B9H0M4_POPTR

Genbank Protein ID

EEE86593.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_818076; POPTR_0004s15790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s15790	POPTR_0004s15790.1	POPTR_0004s15790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-22	80.2	188	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtl...lvsGsdDgtikvWDlrtgv 34
           gH+d v++la     +   ++s+s+Dg+i++W l+ +v
   Q: 188  GHSDTVRGLAkM---HgvgILSASHDGSIRLWALTGQV 222
           8*******9845...13349************998665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDMETDLKIY QLSHELRGHE DDARGICVCG NAGIATSSRD KTVRYWVPDP TDKRKFELSK 60
ILRGHSSFVG PLAWIPPNEV FSEGAIVSGG MDTMVFVWNL SNGEKVHSLS GHQLQVTGVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACATGG AAACCGACTT AAAAATTTAT CAATTAAGCC ACGAGCTTCG CGGCCACGAA 60
GACGACGTAG CAACCCCTAC CTCCCGCCCT CTCTCTCTCT ATATATATCT TTAATTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

pop:POPTR_0004s15790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	63.94	0.00e+00	926.00
IUUC-Aml-002125	Ailuropoda melanoleuca	32.55	3.00e-107	382.00
IUUC-Atr-002554	Amborella trichopoda	64.78	0.00e+00	972.00
IUUC-Apl-004094	Anas platyrhynchos	31.83	2.00e-99	356.00
IUUC-Aca-004726	Anolis carolinensis	31.19	7.00e-100	357.00
IUUC-Ago-007772	Ashbya gossypii	28.69	2.00e-69	256.00
IUUC-Acl-008316	Aspergillus clavatus	29.99	1.00e-71	263.00
IUUC-Afl-008532	Aspergillus flavus	30.77	9.00e-83	301.00
IUUC-Afu-008950	Aspergillus fumigatus	31.20	7.00e-83	301.00
IUUC-Ani-009186	Aspergillus nidulans	31.36	3.00e-88	318.00
IUUC-Ang-009575	Aspergillus niger	31.68	4.00e-81	295.00
IUUC-Aor-010086	Aspergillus oryzae	30.77	9.00e-83	301.00
IUUC-Ate-010541	Aspergillus terreus	31.13	9.00e-86	310.00
IUUC-Ame-011633	Astyanax mexicanus	32.24	2.00e-107	382.00
IUUC-Bgr-012292	Blumeria graminis	28.75	3.00e-79	289.00
IUUC-Bta-013218	Bos taurus	32.37	1.00e-109	390.00
IUUC-Bci-013876	Botrytis cinerea	33.00	2.00e-94	340.00
IUUC-Bdi-014810	Brachypodium distachyon	67.11	0.00e+00	1004.00
IUUC-Cel-018703	Caenorhabditis elegans	26.06	3.00e-37	149.00
IUUC-Cja-019270	Callithrix jacchus	31.78	5.00e-109	388.00
IUUC-Cfa-021262	Canis familiaris	32.55	5.00e-108	384.00
IUUC-Cpo-021449	Cavia porcellus	30.64	5.00e-95	341.00
IUUC-Csa-024140	Chlorocebus sabaeus	31.63	7.00e-109	387.00
IUUC-Cho-024923	Choloepus hoffmanni	34.87	8.00e-38	151.00
IUUC-Cin-025373	Ciona intestinalis	31.35	2.00e-93	336.00
IUUC-Csv-026324	Ciona savignyi	29.57	3.00e-84	305.00
IUUC-Cne-026998	Cryptococcus neoformans	30.65	5.00e-49	189.00
IUUC-Cme-027154	Cyanidioschyzon merolae	28.28	6.00e-55	208.00
IUUC-Dre-028674	Danio rerio	31.49	9.00e-107	380.00
IUUC-Dno-028966	Dasypus novemcinctus	31.26	1.00e-105	377.00
IUUC-Dor-030343	Dipodomys ordii	28.54	4.00e-52	199.00
IUUC-Dse-031385	Dothistroma septosporum	28.19	2.00e-68	253.00
IUUC-Ete-032506	Echinops telfairi	28.54	2.00e-49	190.00
IUUC-Eca-033547	Equus caballus	32.38	7.00e-108	384.00
IUUC-Eeu-034462	Erinaceus europaeus	36.13	3.00e-39	156.00
IUUC-Fca-035893	Felis catus	32.17	1.00e-106	380.00
IUUC-Fal-037235	Ficedula albicollis	31.30	2.00e-105	376.00
IUUC-Fox-037836	Fusarium oxysporum	30.81	4.00e-84	305.00
IUUC-Gmo-038648	Gadus morhua	32.36	2.00e-94	339.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.47	8.00e-80	291.00
IUUC-Gga-040989	Gallus gallus	33.04	8.00e-113	400.00
IUUC-Gac-041344	Gasterosteus aculeatus	30.98	1.00e-97	350.00
IUUC-Ggo-045009	Gorilla gorilla	33.33	4.00e-89	321.00
IUUC-Hsa-046807	Homo sapiens	31.64	2.00e-107	383.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	31.85	2.00e-107	383.00
IUUC-Lch-049597	Latimeria chalumnae	34.40	8.00e-71	260.00
IUUC-Lpe-050821	Leersia perrieri	64.01	0.00e+00	988.00
IUUC-Loc-051849	Lepisosteus oculatus	31.20	4.00e-105	375.00
IUUC-Lma-053297	Leptosphaeria maculans	31.89	7.00e-87	314.00
IUUC-Laf-053495	Loxodonta africana	31.85	4.00e-106	378.00
IUUC-Meu-055983	Macropus eugenii	28.33	1.00e-34	140.00
IUUC-Mor-057006	Magnaporthe oryzae	27.78	5.00e-70	258.00
IUUC-Mvi-060297	Microbotryum violaceum	30.64	2.00e-87	316.00
IUUC-Mmr-060810	Microcebus murinus	30.35	3.00e-97	348.00
IUUC-Mdo-062671	Monodelphis domestica	31.83	3.00e-106	379.00
IUUC-Mmu-063536	Mus musculus	31.63	3.00e-105	375.00
IUUC-Mpu-066085	Mustela putorius furo	32.67	6.00e-109	387.00
IUUC-Mlu-067907	Myotis lucifugus	35.10	1.00e-84	306.00
IUUC-Nfi-068457	Neosartorya fischeri	30.97	4.00e-67	248.00
IUUC-Ncr-068622	Neurospora crassa	30.37	2.00e-84	306.00
IUUC-Nle-069049	Nomascus leucogenys	30.88	4.00e-103	369.00
IUUC-Opr-071013	Ochotona princeps	38.78	2.00e-23	104.00
IUUC-Ont-071339	Oreochromis niloticus	31.26	9.00e-104	370.00
IUUC-Ocu-074625	Oryctolagus cuniculus	31.89	3.00e-109	388.00
IUUC-Oba-075226	Oryza barthii	59.89	0.00e+00	876.00
IUUC-Obr-076875	Oryza brachyantha	65.60	0.00e+00	1036.00
IUUC-Ogl-077057	Oryza glaberrima	65.87	0.00e+00	1019.00
IUUC-Ogu-078156	Oryza glumaepatula	66.27	0.00e+00	1016.00
IUUC-Oin-079373	Oryza indica	66.14	0.00e+00	1019.00
IUUC-Olo-080849	Oryza longistaminata	56.79	0.00e+00	706.00
IUUC-Ome-081654	Oryza meridionalis	60.42	0.00e+00	876.00
IUUC-Oni-082221	Oryza nivara	61.22	0.00e+00	891.00
IUUC-Opu-084103	Oryza punctata	60.69	0.00e+00	859.00
IUUC-Oru-084751	Oryza rufipogon	60.56	0.00e+00	875.00
IUUC-Osa-085584	Oryza sativa	66.67	0.00e+00	1021.00
IUUC-Ola-086974	Oryzias latipes	30.86	5.00e-105	375.00
IUUC-Oga-088052	Otolemur garnettii	29.85	7.00e-97	347.00
IUUC-Oar-089509	Ovis aries	32.09	1.00e-106	380.00
IUUC-Ptr-090911	Pan troglodytes	31.64	3.00e-107	382.00
IUUC-Pan-092141	Papio anubis	31.39	1.00e-106	380.00
IUUC-Psi-093543	Pelodiscus sinensis	31.86	3.00e-97	349.00
IUUC-Pno-094952	Phaeosphaeria nodorum	31.37	5.00e-86	311.00
IUUC-Ppa-095881	Physcomitrella patens	53.02	0.00e+00	804.00
IUUC-Pfo-096739	Poecilia formosa	30.11	3.00e-99	355.00
IUUC-Pab-098641	Pongo abelii	31.56	8.00e-107	380.00
IUUC-Pca-100599	Procavia capensis	29.03	4.00e-82	298.00
IUUC-Pva-103009	Pteropus vampyrus	30.83	2.00e-85	309.00
IUUC-Ptt-103711	Puccinia triticina	29.50	4.00e-66	245.00
IUUC-Pte-104337	Pyrenophora teres	33.02	2.00e-84	306.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	33.02	1.00e-84	306.00
IUUC-Rno-105273	Rattus norvegicus	31.76	1.00e-107	383.00
IUUC-Sha-106758	Sarcophilus harrisii	31.71	6.00e-104	371.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	32.62	3.00e-87	315.00
IUUC-Smo-109368	Selaginella moellendorffii	50.07	0.00e+00	746.00
IUUC-Sit-109699	Setaria italica	66.09	0.00e+00	1023.00
IUUC-Sbi-114745	Sorghum bicolor	63.25	0.00e+00	983.00
IUUC-Sre-115080	Sporisorium reilianum	35.12	4.00e-73	268.00
IUUC-Ssc-115666	Sus scrofa	31.77	6.00e-107	381.00
IUUC-Tgu-116877	Taeniopygia guttata	31.80	2.00e-106	379.00
IUUC-Tru-117580	Takifugu rubripes	30.98	3.00e-101	362.00
IUUC-Tsy-118946	Tarsius syrichta	30.76	6.00e-96	344.00
IUUC-Tni-119755	Tetraodon nigroviridis	31.03	5.00e-101	361.00
IUUC-Tre-122217	Trichoderma reesei	31.42	9.00e-89	320.00
IUUC-Tvi-122671	Trichoderma virens	31.65	9.00e-88	317.00
IUUC-Tae-125234	Triticum aestivum	67.38	0.00e+00	1044.00
IUUC-Tme-126971	Tuber melanosporum	32.86	9.00e-104	370.00
IUUC-Ttr-128173	Tursiops truncatus	32.75	9.00e-108	384.00
IUUC-Uma-129322	Ustilago maydis	27.90	1.00e-76	280.00
IUUC-Vda-129682	Verticillium dahliae	30.52	3.00e-82	299.00
IUUC-Vpa-130607	Vicugna pacos	31.52	2.00e-99	355.00
IUUC-Xtr-132208	Xenopus tropicalis	31.08	9.00e-106	377.00
IUUC-Xma-133098	Xiphophorus maculatus	30.96	1.00e-99	357.00
IUUC-Yli-134646	Yarrowia lipolytica	33.12	2.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence