iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118370

UUCD1 version

UUC-TaR-00490

Ensembl Protein ID

ENSTRUP00000023972.1

UniProt Accession

H2TH23; H2TH23_TAKRU

Protein Name

Coronin

Gene Name

coro1b; LOC101078242

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000009539.1	ENSTRUT00000024071.1	ENSTRUP00000023972.1
ENSTRUG00000009539.1	ENSTRUT00000024072.1	ENSTRUP00000023973.1
ENSTRUG00000009539.1	ENSTRUT00000024073.1	ENSTRUP00000023974.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-16	59.7	81	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v ++++  +d ++++s+s D+t+k+W + +g l
   Q: 81   GHAAPVLDIQWspHDdNIIASASEDCTVKIWQIPDGGL 118
           8***********9445***************9988865 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSFRRGVVRQ SKFRHVFAQV WKSEHCIDDI RVSRVTWDSP LCAVNPKFIA VIVEAGGGGA 60
FLVVPIGKSG RIDQSCPTVC GHAAPVLDIQ WSPHDDNIIA SASEDCTVKI WQIPDGGLTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTTCC GACGAGGTGT GGTCAGGCAG AGCAAGTTCC GCCACGTCTT TGCCCAAGTG 60
TGGAAAAGCG AACACTGCAT CGATGACATC CGCGTGTCCC GCGTCACCTG GGACAGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization

KEGG

tru:101078242

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011896	Astyanax mexicanus	80.20	0.00e+00	832.00
IUUC-Cel-018669	Caenorhabditis elegans	52.38	9.00e-117	414.00
IUUC-Dre-027853	Danio rerio	80.84	0.00e+00	829.00
IUUC-Gmo-038572	Gadus morhua	86.97	0.00e+00	795.00
IUUC-Gac-042055	Gasterosteus aculeatus	85.43	0.00e+00	875.00
IUUC-Ont-072594	Oreochromis niloticus	88.02	0.00e+00	897.00
IUUC-Ola-087251	Oryzias latipes	85.46	0.00e+00	853.00
IUUC-Pfo-097282	Poecilia formosa	85.66	0.00e+00	912.00
IUUC-Tni-120810	Tetraodon nigroviridis	92.83	0.00e+00	928.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence