iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006254

Ensembl Protein ID

fgenesh2_kg.8__224__AT5G45760.1

UniProt Accession

D7MTB8; D7MTB8_ARALL

Genbank Protein ID

EFH41485.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_494408

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__224__AT5G45760.1	fgenesh2_kg.8__224__AT5G45760.1	fgenesh2_kg.8__224__AT5G45760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-15	55.4	270	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDl 30
           gH++ v+c+af      +++l+sG++D+t+k+WD 
   Q: 270  GHNAAVSCVAFslfkeKGRFLISGGNDKTVKIWDC 304
           8*************754499**************6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAMAMEEPRK LRGHKSTATC CIASRDRPGL VLTSGEDGCV CWFDLRCKDV QFIIDVGTEP 60
VSSFCFKTGN ENILYASHGN DIKSFDVHTL SANSWKPLES FSYNKDEVNQ VVCNGKSSFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGG CAATGGAGGA GCCACGGAAG CTGAGAGGCC ACAAATCAAC TGCCACTTGT 60
TGTATAGCTT CACGTGATCG GCCTGGTCTT GTTCTCACTT CCGGCGAGGT TTCTAAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_494408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	50.54	5.00e-92	330.00
IUUC-Aml-001203	Ailuropoda melanoleuca	27.58	2.00e-30	125.00
IUUC-Atr-002680	Amborella trichopoda	56.09	2.00e-95	342.00
IUUC-Apl-003656	Anas platyrhynchos	27.46	3.00e-23	101.00
IUUC-Aca-004987	Anolis carolinensis	30.21	1.00e-27	116.00
IUUC-Ath-006632	Arabidopsis thaliana	90.83	1.00e-176	611.00
IUUC-Ame-011032	Astyanax mexicanus	27.95	3.00e-27	115.00
IUUC-Bta-012588	Bos taurus	28.93	1.00e-31	129.00
IUUC-Bdi-014532	Brachypodium distachyon	53.48	7.00e-104	369.00
IUUC-Bol-015542	Brassica oleracea	81.64	3.00e-149	521.00
IUUC-Bra-017046	Brassica rapa	87.17	7.00e-166	577.00
IUUC-Cja-019365	Callithrix jacchus	28.79	6.00e-31	127.00
IUUC-Cfa-021090	Canis familiaris	27.27	2.00e-29	122.00
IUUC-Cpo-021517	Cavia porcellus	27.39	3.00e-27	115.00
IUUC-Csa-023041	Chlorocebus sabaeus	28.02	4.00e-30	124.00
IUUC-Cho-024801	Choloepus hoffmanni	27.62	1.00e-29	122.00
IUUC-Dre-028437	Danio rerio	29.97	2.00e-19	89.40
IUUC-Dno-029267	Dasypus novemcinctus	28.50	1.00e-28	119.00
IUUC-Ete-032726	Echinops telfairi	23.47	6.00e-11	61.20
IUUC-Eca-033621	Equus caballus	28.09	1.00e-28	120.00
IUUC-Eeu-034461	Erinaceus europaeus	32.12	7.00e-31	127.00
IUUC-Fca-036410	Felis catus	28.35	1.00e-29	123.00
IUUC-Fal-036676	Ficedula albicollis	27.56	4.00e-28	117.00
IUUC-Gac-041905	Gasterosteus aculeatus	28.45	4.00e-30	124.00
IUUC-Gma-044017	Glycine max	59.46	1.00e-112	399.00
IUUC-Ggo-044881	Gorilla gorilla	27.76	2.00e-29	122.00
IUUC-Hsa-046836	Homo sapiens	28.02	4.00e-30	124.00
IUUC-Hvu-047651	Hordeum vulgare	56.08	1.00e-107	382.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	29.34	1.00e-31	129.00
IUUC-Lch-050406	Latimeria chalumnae	26.60	5.00e-22	97.80
IUUC-Lpe-051023	Leersia perrieri	46.46	3.00e-86	311.00
IUUC-Loc-052878	Lepisosteus oculatus	28.57	2.00e-29	122.00
IUUC-Laf-053547	Loxodonta africana	28.79	3.00e-30	125.00
IUUC-Mcc-054646	Macaca mulatta	27.76	2.00e-29	122.00
IUUC-Meu-056381	Macropus eugenii	28.09	5.00e-28	117.00
IUUC-Mtr-058656	Medicago truncatula	55.23	5.00e-113	400.00
IUUC-Mmr-061601	Microcebus murinus	27.25	3.00e-30	125.00
IUUC-Mdo-062305	Monodelphis domestica	27.06	6.00e-28	117.00
IUUC-Mmu-063213	Mus musculus	27.95	4.00e-29	121.00
IUUC-Mac-064940	Musa acuminata	56.91	3.00e-127	447.00
IUUC-Mpu-066629	Mustela putorius furo	26.96	2.00e-30	125.00
IUUC-Nle-069860	Nomascus leucogenys	27.88	5.00e-30	124.00
IUUC-Opr-071180	Ochotona princeps	27.83	4.00e-22	97.80
IUUC-Ont-071912	Oreochromis niloticus	30.03	2.00e-28	119.00
IUUC-Ocu-074874	Oryctolagus cuniculus	27.76	5.00e-30	124.00
IUUC-Oba-075815	Oryza barthii	44.85	5.00e-80	290.00
IUUC-Obr-076835	Oryza brachyantha	52.78	5.00e-79	286.00
IUUC-Ogu-077977	Oryza glumaepatula	46.19	6.00e-79	286.00
IUUC-Oin-079206	Oryza indica	51.59	5.00e-103	367.00
IUUC-Olo-080621	Oryza longistaminata	45.87	5.00e-82	297.00
IUUC-Ome-081261	Oryza meridionalis	44.71	1.00e-78	285.00
IUUC-Oni-082280	Oryza nivara	48.89	3.00e-32	131.00
IUUC-Opu-083256	Oryza punctata	47.21	2.00e-80	291.00
IUUC-Oru-084531	Oryza rufipogon	40.81	8.00e-68	249.00
IUUC-Osa-085892	Oryza sativa	51.59	5.00e-103	367.00
IUUC-Ola-086701	Oryzias latipes	28.38	4.00e-26	111.00
IUUC-Olu-087593	Ostreococcus lucimarinus	23.10	5.00e-08	51.60
IUUC-Oga-088152	Otolemur garnettii	28.61	2.00e-30	125.00
IUUC-Oar-089681	Ovis aries	27.32	2.00e-29	122.00
IUUC-Ptr-091142	Pan troglodytes	28.02	8.00e-30	123.00
IUUC-Pan-092435	Papio anubis	28.70	4.00e-28	117.00
IUUC-Psi-093255	Pelodiscus sinensis	29.26	7.00e-27	114.00
IUUC-Ppa-095829	Physcomitrella patens	37.53	3.00e-62	231.00
IUUC-Pfo-097339	Poecilia formosa	29.47	5.00e-27	114.00
IUUC-Pab-098274	Pongo abelii	27.72	7.00e-29	120.00
IUUC-Pop-099705	Populus trichocarpa	61.60	7.00e-126	442.00
IUUC-Pca-100451	Procavia capensis	30.59	6.00e-31	127.00
IUUC-Ppe-101220	Prunus persica	65.86	1.00e-139	488.00
IUUC-Pva-102385	Pteropus vampyrus	27.13	6.00e-30	124.00
IUUC-Rno-105765	Rattus norvegicus	28.53	4.00e-30	124.00
IUUC-Sha-106533	Sarcophilus harrisii	27.84	5.00e-29	120.00
IUUC-Smo-108698	Selaginella moellendorffii	38.89	5.00e-68	250.00
IUUC-Sit-110297	Setaria italica	54.23	9.00e-76	276.00
IUUC-Sly-111617	Solanum lycopersicum	58.13	2.00e-121	427.00
IUUC-Stu-112531	Solanum tuberosum	58.93	4.00e-123	433.00
IUUC-Sar-113647	Sorex araneus	27.32	5.00e-29	120.00
IUUC-Sbi-114621	Sorghum bicolor	55.08	2.00e-114	405.00
IUUC-Tgu-116482	Taeniopygia guttata	27.30	8.00e-23	100.00
IUUC-Tru-118622	Takifugu rubripes	26.22	4.00e-25	107.00
IUUC-Tsy-119474	Tarsius syrichta	26.48	3.00e-27	115.00
IUUC-Tni-120250	Tetraodon nigroviridis	23.53	2.00e-16	79.30
IUUC-Tca-121583	Theobroma cacao	64.89	4.00e-145	506.00
IUUC-Tae-123764	Triticum aestivum	54.67	3.00e-108	384.00
IUUC-Tur-126076	Triticum urartu	46.56	3.00e-82	298.00
IUUC-Tbe-127545	Tupaia belangeri	28.50	4.00e-31	128.00
IUUC-Ttr-128497	Tursiops truncatus	27.32	8.00e-29	120.00
IUUC-Vpa-130772	Vicugna pacos	30.46	4.00e-27	114.00
IUUC-Vvi-131632	Vitis vinifera	65.25	6.00e-147	512.00
IUUC-Xma-133432	Xiphophorus maculatus	30.46	9.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence