iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132845

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Topoisomerase I-binding, arginine/serine-rich, E3 ubiquitin protein ligase

Genbank Nucleotide ID

AAMC01101809

Gene Name

topors

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014724.2	ENSXETT00000032271.2	ENSXETP00000032271.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-09	38.4	59	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++f++  ++ +C H f++ C+q w      +++++ CPlC+
   Q: 59   CPICLDRFDNVSHLDRCLHRFCFRCIQEW------AKNKAECPLCK 98
           *****************************......**********7 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MREKRTKRRR PGARQEANDT MMASSSNNYS LDGSFSPQAG TSKLQNHGTA TDASPDSKCP 60
ICLDRFDNVS HLDRCLHRFC FRCIQEWAKN KAECPLCKQP FYSIFHSVKA EDDFKEYVLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGTTTGAG ACCCGGCTTA CGGTCACGCC ATGAGGGAGA AGAGAACCAA GCGGCGGAGG 60
CCGGGAGCGA GGCAAGAAGC GAATGACACG GTAAGATATG TTTGTGTATA AACTGGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000940	Aegilops tauschii	35.29	3.00e-09	55.50
IUUC-Aml-002240	Ailuropoda melanoleuca	65.61	4.00e-174	605.00
IUUC-Atr-002964	Amborella trichopoda	34.74	3.00e-12	65.10
IUUC-Apl-003666	Anas platyrhynchos	65.53	2.00e-149	523.00
IUUC-Aca-005305	Anolis carolinensis	64.07	1.00e-158	553.00
IUUC-Aly-005926	Arabidopsis lyrata	33.00	2.00e-11	62.80
IUUC-Ath-007299	Arabidopsis thaliana	32.00	1.00e-11	63.50
IUUC-Ame-011109	Astyanax mexicanus	53.66	1.00e-117	417.00
IUUC-Bta-012637	Bos taurus	66.74	3.00e-175	608.00
IUUC-Bdi-014270	Brachypodium distachyon	40.00	2.00e-11	63.20
IUUC-Bol-015307	Brassica oleracea	31.00	4.00e-11	61.60
IUUC-Bra-017073	Brassica rapa	42.86	1.00e-07	49.70
IUUC-Cel-018585	Caenorhabditis elegans	36.96	2.00e-07	48.90
IUUC-Cja-019105	Callithrix jacchus	67.66	3.00e-175	608.00
IUUC-Cfa-021203	Canis familiaris	67.13	4.00e-174	605.00
IUUC-Cpo-022335	Cavia porcellus	66.28	2.00e-163	569.00
IUUC-Csa-023870	Chlorocebus sabaeus	67.66	9.00e-175	607.00
IUUC-Cho-024870	Choloepus hoffmanni	68.50	7.00e-166	577.00
IUUC-Dre-027535	Danio rerio	54.03	2.00e-119	423.00
IUUC-Dno-028963	Dasypus novemcinctus	66.67	4.00e-169	588.00
IUUC-Dor-030239	Dipodomys ordii	68.51	8.00e-161	560.00
IUUC-Dme-031941	Drosophila melanogaster	31.80	1.00e-40	161.00
IUUC-Ete-032300	Echinops telfairi	64.12	5.00e-159	555.00
IUUC-Eca-033690	Equus caballus	67.82	2.00e-176	612.00
IUUC-Eeu-035257	Erinaceus europaeus	66.08	5.00e-168	585.00
IUUC-Fca-036383	Felis catus	66.90	2.00e-172	599.00
IUUC-Fal-037209	Ficedula albicollis	65.27	2.00e-165	576.00
IUUC-Gmo-039416	Gadus morhua	53.94	5.00e-115	407.00
IUUC-Gga-041267	Gallus gallus	68.35	0.00e+00	630.00
IUUC-Gac-042227	Gasterosteus aculeatus	53.81	6.00e-124	437.00
IUUC-Gma-043386	Glycine max	31.67	6.00e-13	67.80
IUUC-Ggo-044445	Gorilla gorilla	67.36	9.00e-175	607.00
IUUC-Hsa-045844	Homo sapiens	67.36	7.00e-175	607.00
IUUC-Hvu-047531	Hordeum vulgare	42.00	1.00e-10	57.00
IUUC-Itr-048818	Ictidomys tridecemlineatus	67.36	4.00e-174	605.00
IUUC-Lch-050031	Latimeria chalumnae	67.88	3.00e-170	592.00
IUUC-Loc-052944	Lepisosteus oculatus	62.44	7.00e-143	501.00
IUUC-Lma-053202	Leptosphaeria maculans	23.95	1.00e-07	50.10
IUUC-Laf-053820	Loxodonta africana	68.74	4.00e-172	598.00
IUUC-Mcc-054800	Macaca mulatta	67.66	5.00e-175	608.00
IUUC-Meu-056806	Macropus eugenii	65.67	8.00e-162	563.00
IUUC-Mtr-058378	Medicago truncatula	33.33	8.00e-14	70.50
IUUC-Mla-059017	Melampsora laricipopulina	34.43	3.00e-07	49.70
IUUC-Mvi-060417	Microbotryum violaceum	25.53	5.00e-17	82.80
IUUC-Mmr-061481	Microcebus murinus	68.06	2.00e-176	612.00
IUUC-Mdo-062219	Monodelphis domestica	66.79	6.00e-99	355.00
IUUC-Mmu-064138	Mus musculus	65.16	8.00e-155	541.00
IUUC-Mac-064635	Musa acuminata	33.66	4.00e-12	63.90
IUUC-Mlu-067088	Myotis lucifugus	67.21	7.00e-172	597.00
IUUC-Nle-069862	Nomascus leucogenys	67.66	7.00e-175	607.00
IUUC-Opr-071076	Ochotona princeps	67.67	5.00e-165	575.00
IUUC-Ont-072225	Oreochromis niloticus	53.24	3.00e-111	395.00
IUUC-Oan-073069	Ornithorhynchus anatinus	62.80	8.00e-147	513.00
IUUC-Ocu-074826	Oryctolagus cuniculus	67.90	8.00e-176	610.00
IUUC-Oba-075429	Oryza barthii	37.68	1.00e-10	59.70
IUUC-Obr-076084	Oryza brachyantha	36.23	3.00e-10	58.50
IUUC-Ogl-077444	Oryza glaberrima	37.68	2.00e-10	59.70
IUUC-Ogu-078603	Oryza glumaepatula	37.68	1.00e-10	59.70
IUUC-Oin-079777	Oryza indica	37.68	2.00e-10	59.30
IUUC-Oni-082396	Oryza nivara	37.68	1.00e-10	59.70
IUUC-Opu-083698	Oryza punctata	36.62	7.00e-10	57.80
IUUC-Oru-084305	Oryza rufipogon	37.68	2.00e-10	59.70
IUUC-Ola-087377	Oryzias latipes	54.76	4.00e-108	384.00
IUUC-Oga-088059	Otolemur garnettii	65.39	2.00e-173	602.00
IUUC-Oar-089592	Ovis aries	66.97	8.00e-174	604.00
IUUC-Ptr-091233	Pan troglodytes	67.59	3.00e-175	608.00
IUUC-Pan-092743	Papio anubis	67.66	3.00e-175	608.00
IUUC-Psi-093669	Pelodiscus sinensis	73.97	0.00e+00	682.00
IUUC-Ppa-095668	Physcomitrella patens	25.52	4.00e-20	92.40
IUUC-Pfo-096706	Poecilia formosa	57.07	2.00e-108	386.00
IUUC-Pop-100021	Populus trichocarpa	23.79	1.00e-11	63.50
IUUC-Pca-100967	Procavia capensis	68.02	3.00e-158	552.00
IUUC-Ppe-101922	Prunus persica	35.21	3.00e-07	48.90
IUUC-Pva-102982	Pteropus vampyrus	67.82	2.00e-174	606.00
IUUC-Pgr-103551	Puccinia graminis	33.82	1.00e-07	50.40
IUUC-Ptt-103977	Puccinia triticina	32.05	1.00e-07	50.10
IUUC-Rno-105730	Rattus norvegicus	64.25	1.00e-152	534.00
IUUC-Sha-106588	Sarcophilus harrisii	63.04	3.00e-159	555.00
IUUC-Sja-107735	Schizosaccharomyces japonicus	23.21	7.00e-08	50.80
IUUC-Smo-109039	Selaginella moellendorffii	23.01	5.00e-18	85.10
IUUC-Sly-110956	Solanum lycopersicum	26.98	3.00e-09	55.50
IUUC-Stu-111938	Solanum tuberosum	26.09	3.00e-07	48.50
IUUC-Sar-113622	Sorex araneus	65.67	8.00e-105	375.00
IUUC-Sre-115041	Sporisorium reilianum	34.15	1.00e-08	53.50
IUUC-Ssc-115244	Sus scrofa	67.36	2.00e-165	576.00
IUUC-Tgu-117180	Taeniopygia guttata	68.42	1.00e-172	600.00
IUUC-Tru-118393	Takifugu rubripes	56.22	3.00e-122	432.00
IUUC-Tsy-119408	Tarsius syrichta	68.42	3.00e-172	598.00
IUUC-Tni-120664	Tetraodon nigroviridis	55.53	5.00e-119	421.00
IUUC-Tca-121712	Theobroma cacao	27.03	2.00e-16	79.30
IUUC-Tae-122787	Triticum aestivum	37.14	1.00e-10	60.50
IUUC-Tbe-127301	Tupaia belangeri	67.18	5.00e-156	545.00
IUUC-Ttr-128204	Tursiops truncatus	66.52	4.00e-176	612.00
IUUC-Uma-129420	Ustilago maydis	40.79	7.00e-09	54.70
IUUC-Vpa-130297	Vicugna pacos	67.82	2.00e-174	606.00
IUUC-Vvi-131157	Vitis vinifera	39.39	4.00e-09	55.50
IUUC-Xma-133439	Xiphophorus maculatus	55.20	1.00e-109	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence